| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is 119718774
Identifier: 119718774
GI number: 119718774
Start: 4819777
End: 4821531
Strand: Reverse
Name: 119718774
Synonym: Noca_4555
Alternate gene names: NA
Gene position: 4821531-4819777 (Counterclockwise)
Preceding gene: 119718775
Following gene: 119718773
Centisome position: 96.7
GC content: 74.42
Gene sequence:
>1755_bases GTGGCTGAGGCACCCACGCAGGGCCTCGAGAGGGCACTGCGGATCGGCAACTGCTCCGGCTTCTACGGCGACCGGCTCTC CGCGATGCGGGAGATGCTCGAGGGCCGCCAGGACGACGGGTCCGTCCTGGACGTGCTCACCGGCGACTACCTGGCCGAGC TGACCATGCTGATCCTCGGCAAGGACACCATGAAGGACCCGGCGCTCGGCTACGCGCGGACCCACCTGCGCCAGCTCGAG GACTGCCTCGGCCTCGCGCTCGAGCGCGGGGTCCGGATCGTCAGCAACGCCGGCGGGCTCAACCCCGCCGGACTCGCCGA CCGGATCCGCGAGGTCGCCCGCGGCCTCGGCCTCGACCCGGCCGTCGCGCACGTCGAGGGCGACGACCTGCGGTCGCGCG CCGCCGAGCTCGGGTTCGCGGGCGCGCTCACCGCCAACGCCTACCTCGGTGGGTTCGGCATCGCCGCCGCGCTCACCGCC GGCGCCGACGTGGTCGTCACCGGCCGGGTCACCGACGCCAGCCTCGTGGTCGGGCCCGCGGTCGCGCACCACGGCTGGAC GCCGACGTCGTACGACGAGCTCGCCGGCGCGGTCGTGGCCGGGCACGTGCTCGAGTGCGGCACCCAGGCCACCGGCGGCA ACTTCTCCGGCTTCCGCGCCCTCCCGCACGACGGGCGGCCGCTCGGCTTCCCGCTGGCGGAGATCGCGGCCGACGGCTCC TGCGTGGTCACCAAGCAGGCCGGCACCGGTGGCGCGGTCACCGTCGACACGGTCACCGCCCAGCTCATGTACGAGATCCA GAGCACCCGCTACCTCAACCCCGACGTCACCACCCGCCTCGACACCGTCCGGCTCCGCGAGGTCGGCCACGACCGGGTGG AGGTCAGCGGCGTGCGCGGCGAGGCGCCGCCGGAGCGGCTCAAGGTCTGCGTCAACGAGCTCGGAGGCTTCCGCAACACC GTCGAGCTCGTGCTCACCGGGCTCGACATCGACGCGAAGGCCGACTGGGTGCGCGAGCAGCTCACCCCGGCGCTGACGGC GCAGGGGGTCAGCTGGACCCGCACCGCGCTGCCGCCGGCCGACGCGGACACCGAGGAGGGCGCGTCCTGCCTGCTGCGCT GCACGGTCAAGGACGAGCGACCCGACCCGGTCGGCCGCGCGTTCACCAGTGCCGCGGTGGAGCTGGCGCTCGCGTCGTAC CCCGGCTTCACGATGACCGCTCCGCCCGCGCAGCCCACGCCGTACGGCGTCTACCGCGCGGCGTACGTCGACCGCAGCGC CGTCACCCACACGGTCGTGCACGCGGACGGCCGCCGGGAGGCGGTCGCGGACCCGACCGCGTTCGGCGAGCCGGACCACG ACACCGGCCGGCGCCCGTCCCCGTACACCGCCCCGACGGACTCGCTGACCCGGCGGGTGCCGCTCGGCACGTTCGTGCAC GCGCGGTCCGGGGACAAGGGCGGCGACGCGAACCTGGGACTCTGGGTGGTCAACGACGGATCGGGGAAGTACGACGCCCG GGTCACCTGGCTCGCGAAGCTGATCACCCCCCGCAAGGTCCGCGAGCTCGTGCCCGAGGCCGCCGACCTGGAGGTCGAGG TCTTCGTGCTGCCCAACCTCGGCGGCGTCAACGTGCTGATCCGCGGGCTGCTCGGCGACGGGGTCGCGGCGTCGACCCGG TTCGACCCGCAGGCGAAGGGGCTCGGCGAGTGGGTGCGCTCCCGGATGGTGCACGTGCAGGAGGGGTTGCTGTGA
Upstream 100 bases:
>100_bases CGCGACGACACCGACCTGGTCGCGACCGGCGCCGATGCCGAGAAGTGGCTGACGATCGCGCAGGCCTTTGCCGGTCCCGC CGGTGAGGGGAGGCCCTCCC
Downstream 100 bases:
>100_bases CCGAGCAGGGGATCGCGAGGAACGAGCGAGGTCCGTCGAGCGGGATCCGTGAGCTCGGCGCCGAGTTCGTCCGGCGCGAG GTGGCGCCGTACCTCCAGGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 584; Mature: 583
Protein sequence:
>584_residues MAEAPTQGLERALRIGNCSGFYGDRLSAMREMLEGRQDDGSVLDVLTGDYLAELTMLILGKDTMKDPALGYARTHLRQLE DCLGLALERGVRIVSNAGGLNPAGLADRIREVARGLGLDPAVAHVEGDDLRSRAAELGFAGALTANAYLGGFGIAAALTA GADVVVTGRVTDASLVVGPAVAHHGWTPTSYDELAGAVVAGHVLECGTQATGGNFSGFRALPHDGRPLGFPLAEIAADGS CVVTKQAGTGGAVTVDTVTAQLMYEIQSTRYLNPDVTTRLDTVRLREVGHDRVEVSGVRGEAPPERLKVCVNELGGFRNT VELVLTGLDIDAKADWVREQLTPALTAQGVSWTRTALPPADADTEEGASCLLRCTVKDERPDPVGRAFTSAAVELALASY PGFTMTAPPAQPTPYGVYRAAYVDRSAVTHTVVHADGRREAVADPTAFGEPDHDTGRRPSPYTAPTDSLTRRVPLGTFVH ARSGDKGGDANLGLWVVNDGSGKYDARVTWLAKLITPRKVRELVPEAADLEVEVFVLPNLGGVNVLIRGLLGDGVAASTR FDPQAKGLGEWVRSRMVHVQEGLL
Sequences:
>Translated_584_residues MAEAPTQGLERALRIGNCSGFYGDRLSAMREMLEGRQDDGSVLDVLTGDYLAELTMLILGKDTMKDPALGYARTHLRQLE DCLGLALERGVRIVSNAGGLNPAGLADRIREVARGLGLDPAVAHVEGDDLRSRAAELGFAGALTANAYLGGFGIAAALTA GADVVVTGRVTDASLVVGPAVAHHGWTPTSYDELAGAVVAGHVLECGTQATGGNFSGFRALPHDGRPLGFPLAEIAADGS CVVTKQAGTGGAVTVDTVTAQLMYEIQSTRYLNPDVTTRLDTVRLREVGHDRVEVSGVRGEAPPERLKVCVNELGGFRNT VELVLTGLDIDAKADWVREQLTPALTAQGVSWTRTALPPADADTEEGASCLLRCTVKDERPDPVGRAFTSAAVELALASY PGFTMTAPPAQPTPYGVYRAAYVDRSAVTHTVVHADGRREAVADPTAFGEPDHDTGRRPSPYTAPTDSLTRRVPLGTFVH ARSGDKGGDANLGLWVVNDGSGKYDARVTWLAKLITPRKVRELVPEAADLEVEVFVLPNLGGVNVLIRGLLGDGVAASTR FDPQAKGLGEWVRSRMVHVQEGLL >Mature_583_residues AEAPTQGLERALRIGNCSGFYGDRLSAMREMLEGRQDDGSVLDVLTGDYLAELTMLILGKDTMKDPALGYARTHLRQLED CLGLALERGVRIVSNAGGLNPAGLADRIREVARGLGLDPAVAHVEGDDLRSRAAELGFAGALTANAYLGGFGIAAALTAG ADVVVTGRVTDASLVVGPAVAHHGWTPTSYDELAGAVVAGHVLECGTQATGGNFSGFRALPHDGRPLGFPLAEIAADGSC VVTKQAGTGGAVTVDTVTAQLMYEIQSTRYLNPDVTTRLDTVRLREVGHDRVEVSGVRGEAPPERLKVCVNELGGFRNTV ELVLTGLDIDAKADWVREQLTPALTAQGVSWTRTALPPADADTEEGASCLLRCTVKDERPDPVGRAFTSAAVELALASYP GFTMTAPPAQPTPYGVYRAAYVDRSAVTHTVVHADGRREAVADPTAFGEPDHDTGRRPSPYTAPTDSLTRRVPLGTFVHA RSGDKGGDANLGLWVVNDGSGKYDARVTWLAKLITPRKVRELVPEAADLEVEVFVLPNLGGVNVLIRGLLGDGVAASTRF DPQAKGLGEWVRSRMVHVQEGLL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 61691; Mature: 61560
Theoretical pI: Translated: 5.10; Mature: 5.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAEAPTQGLERALRIGNCSGFYGDRLSAMREMLEGRQDDGSVLDVLTGDYLAELTMLILG CCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCCCEEEHHHHHHHHHHHHHHHC KDTMKDPALGYARTHLRQLEDCLGLALERGVRIVSNAGGLNPAGLADRIREVARGLGLDP CCCCCCCCHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCHHHHHHHHHHHHHHCCCCH AVAHVEGDDLRSRAAELGFAGALTANAYLGGFGIAAALTAGADVVVTGRVTDASLVVGPA HEEECCCHHHHHHHHHCCCCHHHHHCHHHHHHHHHHHHHCCCCEEEEECCCCCEEEECCH VAHHGWTPTSYDELAGAVVAGHVLECGTQATGGNFSGFRALPHDGRPLGFPLAEIAADGS HHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCC CVVTKQAGTGGAVTVDTVTAQLMYEIQSTRYLNPDVTTRLDTVRLREVGHDRVEVSGVRG EEEEEECCCCCEEEHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCEEEEECCCC EAPPERLKVCVNELGGFRNTVELVLTGLDIDAKADWVREQLTPALTAQGVSWTRTALPPA CCCHHHHHHHHHHHCCCHHEEEHEEECCCCCCHHHHHHHHHCHHHHHCCCCEEECCCCCC DADTEEGASCLLRCTVKDERPDPVGRAFTSAAVELALASYPGFTMTAPPAQPTPYGVYRA CCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCHHHH AYVDRSAVTHTVVHADGRREAVADPTAFGEPDHDTGRRPSPYTAPTDSLTRRVPLGTFVH HHHCCHHHEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCEEEE ARSGDKGGDANLGLWVVNDGSGKYDARVTWLAKLITPRKVRELVPEAADLEVEVFVLPNL ECCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHCHHHHHHHCCCCCCCEEEEEEECCC GGVNVLIRGLLGDGVAASTRFDPQAKGLGEWVRSRMVHVQEGLL CCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure AEAPTQGLERALRIGNCSGFYGDRLSAMREMLEGRQDDGSVLDVLTGDYLAELTMLILG CCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCCCEEEHHHHHHHHHHHHHHHC KDTMKDPALGYARTHLRQLEDCLGLALERGVRIVSNAGGLNPAGLADRIREVARGLGLDP CCCCCCCCHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCHHHHHHHHHHHHHHCCCCH AVAHVEGDDLRSRAAELGFAGALTANAYLGGFGIAAALTAGADVVVTGRVTDASLVVGPA HEEECCCHHHHHHHHHCCCCHHHHHCHHHHHHHHHHHHHCCCCEEEEECCCCCEEEECCH VAHHGWTPTSYDELAGAVVAGHVLECGTQATGGNFSGFRALPHDGRPLGFPLAEIAADGS HHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCC CVVTKQAGTGGAVTVDTVTAQLMYEIQSTRYLNPDVTTRLDTVRLREVGHDRVEVSGVRG EEEEEECCCCCEEEHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCEEEEECCCC EAPPERLKVCVNELGGFRNTVELVLTGLDIDAKADWVREQLTPALTAQGVSWTRTALPPA CCCHHHHHHHHHHHCCCHHEEEHEEECCCCCCHHHHHHHHHCHHHHHCCCCEEECCCCCC DADTEEGASCLLRCTVKDERPDPVGRAFTSAAVELALASYPGFTMTAPPAQPTPYGVYRA CCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCHHHH AYVDRSAVTHTVVHADGRREAVADPTAFGEPDHDTGRRPSPYTAPTDSLTRRVPLGTFVH HHHCCHHHEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCEEEE ARSGDKGGDANLGLWVVNDGSGKYDARVTWLAKLITPRKVRELVPEAADLEVEVFVLPNL ECCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHCHHHHHHHCCCCCCCEEEEEEECCC GGVNVLIRGLLGDGVAASTRFDPQAKGLGEWVRSRMVHVQEGLL CCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA