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The map label for this gene is mmgC [H]

Identifier: 119718773

GI number: 119718773

Start: 4818620

End: 4819780

Strand: Reverse

Name: mmgC [H]

Synonym: Noca_4554

Alternate gene names: 119718773

Gene position: 4819780-4818620 (Counterclockwise)

Preceding gene: 119718774

Following gene: 119718772

Centisome position: 96.67

GC content: 72.44

Gene sequence:

>1161_bases
GTGACCGAGCAGGGGATCGCGAGGAACGAGCGAGGTCCGTCGAGCGGGATCCGTGAGCTCGGCGCCGAGTTCGTCCGGCG
CGAGGTGGCGCCGTACCTCCAGGAGTGGGAGGACGCCGGCGAGATCCCGCGCGAGCTGCACCGGGCGGCCGCGAAGCAGG
GCCTGCTCGGCATCTCCTTCCCCGAGGAGGTCGGCGGTGGGGGCGGCGACGTCCTGGACAGCGTCGAGCTCCAGGAGGGG
ATGTTCGAGGCCGGCGCGTCGAGCGGGCTGATGGCCGGCCTGTTCACCGGCGGCATCGCGCTGCCGCACATCGCGGCGCA
CGGCTCGCCCGACCTGGTCGACCGGTTCGTCCGGCCGACCCTGGCCGGGGAGAAGATCGGCGCGCTCGGCGTCACCGAGC
CCGGGGGCGGCTCGGACGTCGCCGGCATCCGGACCACGGCCCGCCGGGAGGGCGACGTCTACGTCGTCAACGGCGCCAAG
ACGTTCATCACCAGCGGCGTGCGCGGCGACTTCGTCACCACCGCGGTCCGCACCGGCCCCGACGGCCATGCCGGCCTGTC
GTTGCTGGTGATCGAGAAGGGCGCGCCCGGCTTCACGGTGGACCGGGCGCTGACCAAGATGGGCTGGCATTGCTCCGACA
CCGCCGAGCTCTCGTTCGTCGACGTCGAGGTGCCGGTCGCGAACCTGGTCGGCGAGGAGAACGCCGGCTTCTACTACATC
GCGGAGCAGTTCGTGGTCGAGCGGCTCGCGCTCGCCGTGCACGCCTACGGCATCGCCGCCCGGTCGCTCGAGCTGACCGC
GGCGTACTGCCGCGACCGGGAGACCTTCGGCAGGCCGCTGATCGCCAACCAGGTGGTGCGCCACAAGCTCGTCGAGATGA
GGCGGCAGGTCGAGGTGGCCCGGGCCTACGCCCGGGAGGTGGCCCGCCGGCATGCCGCCGGTGAGTCCGTGATCGCCGAG
GTCTGCCTGGCCAAGCAGACCGCCTGCGACGCCGCGACGTACGTCTGTGACCAGGCCGTCCAGCTGCACGGCGGGACGGG
ATACATGCACGGGACCGAGGTGGAGCGGCACTACCGCGACGCCCGGATCCTGCCGATCGGAGGAGGTGCGACCGAGGTGC
TCACCGATCTCGCCGCCAAGCTGCTGGGGTACGCCCGATGA

Upstream 100 bases:

>100_bases
TCGGCGACGGGGTCGCGGCGTCGACCCGGTTCGACCCGCAGGCGAAGGGGCTCGGCGAGTGGGTGCGCTCCCGGATGGTG
CACGTGCAGGAGGGGTTGCT

Downstream 100 bases:

>100_bases
CGGGGCTGCCGGGGCCGTTGTCAGGCCCGATGACGGGTGAGGTGACCGTCCGGATGGAGGCGCCACCCGAGAAGGTGTGG
GCGCTGGTCAGCGACGTCAC

Product: acyl-CoA dehydrogenase domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 386; Mature: 385

Protein sequence:

>386_residues
MTEQGIARNERGPSSGIRELGAEFVRREVAPYLQEWEDAGEIPRELHRAAAKQGLLGISFPEEVGGGGGDVLDSVELQEG
MFEAGASSGLMAGLFTGGIALPHIAAHGSPDLVDRFVRPTLAGEKIGALGVTEPGGGSDVAGIRTTARREGDVYVVNGAK
TFITSGVRGDFVTTAVRTGPDGHAGLSLLVIEKGAPGFTVDRALTKMGWHCSDTAELSFVDVEVPVANLVGEENAGFYYI
AEQFVVERLALAVHAYGIAARSLELTAAYCRDRETFGRPLIANQVVRHKLVEMRRQVEVARAYAREVARRHAAGESVIAE
VCLAKQTACDAATYVCDQAVQLHGGTGYMHGTEVERHYRDARILPIGGGATEVLTDLAAKLLGYAR

Sequences:

>Translated_386_residues
MTEQGIARNERGPSSGIRELGAEFVRREVAPYLQEWEDAGEIPRELHRAAAKQGLLGISFPEEVGGGGGDVLDSVELQEG
MFEAGASSGLMAGLFTGGIALPHIAAHGSPDLVDRFVRPTLAGEKIGALGVTEPGGGSDVAGIRTTARREGDVYVVNGAK
TFITSGVRGDFVTTAVRTGPDGHAGLSLLVIEKGAPGFTVDRALTKMGWHCSDTAELSFVDVEVPVANLVGEENAGFYYI
AEQFVVERLALAVHAYGIAARSLELTAAYCRDRETFGRPLIANQVVRHKLVEMRRQVEVARAYAREVARRHAAGESVIAE
VCLAKQTACDAATYVCDQAVQLHGGTGYMHGTEVERHYRDARILPIGGGATEVLTDLAAKLLGYAR
>Mature_385_residues
TEQGIARNERGPSSGIRELGAEFVRREVAPYLQEWEDAGEIPRELHRAAAKQGLLGISFPEEVGGGGGDVLDSVELQEGM
FEAGASSGLMAGLFTGGIALPHIAAHGSPDLVDRFVRPTLAGEKIGALGVTEPGGGSDVAGIRTTARREGDVYVVNGAKT
FITSGVRGDFVTTAVRTGPDGHAGLSLLVIEKGAPGFTVDRALTKMGWHCSDTAELSFVDVEVPVANLVGEENAGFYYIA
EQFVVERLALAVHAYGIAARSLELTAAYCRDRETFGRPLIANQVVRHKLVEMRRQVEVARAYAREVARRHAAGESVIAEV
CLAKQTACDAATYVCDQAVQLHGGTGYMHGTEVERHYRDARILPIGGGATEVLTDLAAKLLGYAR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the acyl-CoA dehydrogenase family [H]

Homologues:

Organism=Homo sapiens, GI4501857, Length=384, Percent_Identity=37.5, Blast_Score=259, Evalue=2e-69,
Organism=Homo sapiens, GI7656849, Length=378, Percent_Identity=32.5396825396825, Blast_Score=202, Evalue=3e-52,
Organism=Homo sapiens, GI226958412, Length=362, Percent_Identity=30.6629834254144, Blast_Score=188, Evalue=9e-48,
Organism=Homo sapiens, GI4557233, Length=352, Percent_Identity=32.9545454545455, Blast_Score=185, Evalue=7e-47,
Organism=Homo sapiens, GI187960098, Length=362, Percent_Identity=31.767955801105, Blast_Score=177, Evalue=1e-44,
Organism=Homo sapiens, GI4557231, Length=362, Percent_Identity=31.767955801105, Blast_Score=177, Evalue=1e-44,
Organism=Homo sapiens, GI226958414, Length=333, Percent_Identity=30.6306306306306, Blast_Score=175, Evalue=6e-44,
Organism=Homo sapiens, GI4501859, Length=365, Percent_Identity=28.2191780821918, Blast_Score=172, Evalue=5e-43,
Organism=Homo sapiens, GI21361497, Length=355, Percent_Identity=28.4507042253521, Blast_Score=122, Evalue=4e-28,
Organism=Homo sapiens, GI4557235, Length=384, Percent_Identity=29.1666666666667, Blast_Score=113, Evalue=2e-25,
Organism=Homo sapiens, GI76496475, Length=384, Percent_Identity=29.1666666666667, Blast_Score=113, Evalue=3e-25,
Organism=Homo sapiens, GI38505218, Length=294, Percent_Identity=26.530612244898, Blast_Score=91, Evalue=2e-18,
Organism=Homo sapiens, GI48976061, Length=295, Percent_Identity=27.1186440677966, Blast_Score=88, Evalue=2e-17,
Organism=Homo sapiens, GI211971008, Length=295, Percent_Identity=27.1186440677966, Blast_Score=88, Evalue=2e-17,
Organism=Homo sapiens, GI7669494, Length=257, Percent_Identity=28.4046692607004, Blast_Score=87, Evalue=2e-17,
Organism=Homo sapiens, GI4503943, Length=257, Percent_Identity=28.4046692607004, Blast_Score=87, Evalue=2e-17,
Organism=Escherichia coli, GI87081958, Length=370, Percent_Identity=32.4324324324324, Blast_Score=167, Evalue=1e-42,
Organism=Escherichia coli, GI1786223, Length=364, Percent_Identity=29.3956043956044, Blast_Score=135, Evalue=3e-33,
Organism=Escherichia coli, GI87082384, Length=283, Percent_Identity=28.2685512367491, Blast_Score=80, Evalue=2e-16,
Organism=Caenorhabditis elegans, GI17551932, Length=371, Percent_Identity=31.266846361186, Blast_Score=192, Evalue=2e-49,
Organism=Caenorhabditis elegans, GI17505929, Length=366, Percent_Identity=31.6939890710383, Blast_Score=190, Evalue=1e-48,
Organism=Caenorhabditis elegans, GI17570075, Length=364, Percent_Identity=32.1428571428571, Blast_Score=181, Evalue=8e-46,
Organism=Caenorhabditis elegans, GI17569725, Length=374, Percent_Identity=29.144385026738, Blast_Score=174, Evalue=6e-44,
Organism=Caenorhabditis elegans, GI17538396, Length=360, Percent_Identity=29.1666666666667, Blast_Score=172, Evalue=2e-43,
Organism=Caenorhabditis elegans, GI17534899, Length=365, Percent_Identity=30.6849315068493, Blast_Score=171, Evalue=9e-43,
Organism=Caenorhabditis elegans, GI17506239, Length=361, Percent_Identity=28.2548476454294, Blast_Score=164, Evalue=5e-41,
Organism=Caenorhabditis elegans, GI17508101, Length=360, Percent_Identity=27.7777777777778, Blast_Score=164, Evalue=6e-41,
Organism=Caenorhabditis elegans, GI17533517, Length=369, Percent_Identity=28.7262872628726, Blast_Score=163, Evalue=1e-40,
Organism=Caenorhabditis elegans, GI71990804, Length=275, Percent_Identity=29.4545454545455, Blast_Score=140, Evalue=2e-33,
Organism=Caenorhabditis elegans, GI71985184, Length=348, Percent_Identity=29.0229885057471, Blast_Score=127, Evalue=1e-29,
Organism=Caenorhabditis elegans, GI32563615, Length=232, Percent_Identity=28.8793103448276, Blast_Score=112, Evalue=3e-25,
Organism=Caenorhabditis elegans, GI17534353, Length=257, Percent_Identity=28.4046692607004, Blast_Score=108, Evalue=7e-24,
Organism=Caenorhabditis elegans, GI71982178, Length=279, Percent_Identity=23.6559139784946, Blast_Score=100, Evalue=1e-21,
Organism=Caenorhabditis elegans, GI71985192, Length=279, Percent_Identity=27.5985663082437, Blast_Score=90, Evalue=2e-18,
Organism=Caenorhabditis elegans, GI17531909, Length=241, Percent_Identity=21.5767634854772, Blast_Score=78, Evalue=7e-15,
Organism=Caenorhabditis elegans, GI17562446, Length=288, Percent_Identity=24.6527777777778, Blast_Score=74, Evalue=2e-13,
Organism=Caenorhabditis elegans, GI86563383, Length=268, Percent_Identity=28.7313432835821, Blast_Score=64, Evalue=1e-10,
Organism=Drosophila melanogaster, GI21355753, Length=363, Percent_Identity=30.5785123966942, Blast_Score=186, Evalue=2e-47,
Organism=Drosophila melanogaster, GI24660351, Length=361, Percent_Identity=32.1329639889197, Blast_Score=179, Evalue=3e-45,
Organism=Drosophila melanogaster, GI21356377, Length=352, Percent_Identity=29.5454545454545, Blast_Score=174, Evalue=1e-43,
Organism=Drosophila melanogaster, GI24646207, Length=353, Percent_Identity=30.028328611898, Blast_Score=162, Evalue=3e-40,
Organism=Drosophila melanogaster, GI24666513, Length=367, Percent_Identity=26.4305177111717, Blast_Score=154, Evalue=1e-37,
Organism=Drosophila melanogaster, GI281363737, Length=334, Percent_Identity=29.3413173652695, Blast_Score=127, Evalue=1e-29,
Organism=Drosophila melanogaster, GI19920834, Length=272, Percent_Identity=27.5735294117647, Blast_Score=85, Evalue=8e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006089
- InterPro:   IPR006092
- InterPro:   IPR006090
- InterPro:   IPR006091
- InterPro:   IPR009075
- InterPro:   IPR013786
- InterPro:   IPR009100 [H]

Pfam domain/function: PF00441 Acyl-CoA_dh_1; PF02770 Acyl-CoA_dh_M; PF02771 Acyl-CoA_dh_N [H]

EC number: NA

Molecular weight: Translated: 41055; Mature: 40924

Theoretical pI: Translated: 5.45; Mature: 5.45

Prosite motif: PS00072 ACYL_COA_DH_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTEQGIARNERGPSSGIRELGAEFVRREVAPYLQEWEDAGEIPRELHRAAAKQGLLGISF
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCC
PEEVGGGGGDVLDSVELQEGMFEAGASSGLMAGLFTGGIALPHIAAHGSPDLVDRFVRPT
HHHHCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHCCHHHHHHHCCCCHHHHHHHHHHH
LAGEKIGALGVTEPGGGSDVAGIRTTARREGDVYVVNGAKTFITSGVRGDFVTTAVRTGP
HCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCEEEECCCHHHHHCCCCCCHHHHHHCCCC
DGHAGLSLLVIEKGAPGFTVDRALTKMGWHCSDTAELSFVDVEVPVANLVGEENAGFYYI
CCCCCEEEEEEECCCCCCHHHHHHHHHCCCCCCCCCEEEEEEECCHHHHCCCCCCCEEEH
AEQFVVERLALAVHAYGIAARSLELTAAYCRDRETFGRPLIANQVVRHKLVEMRRQVEVA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHCCCHHHHHHHHHHHHHHHHHHHHH
RAYAREVARRHAAGESVIAEVCLAKQTACDAATYVCDQAVQLHGGTGYMHGTEVERHYRD
HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCHHHHHHCC
ARILPIGGGATEVLTDLAAKLLGYAR
CEEEEECCCHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
TEQGIARNERGPSSGIRELGAEFVRREVAPYLQEWEDAGEIPRELHRAAAKQGLLGISF
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCC
PEEVGGGGGDVLDSVELQEGMFEAGASSGLMAGLFTGGIALPHIAAHGSPDLVDRFVRPT
HHHHCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHCCHHHHHHHCCCCHHHHHHHHHHH
LAGEKIGALGVTEPGGGSDVAGIRTTARREGDVYVVNGAKTFITSGVRGDFVTTAVRTGP
HCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCEEEECCCHHHHHCCCCCCHHHHHHCCCC
DGHAGLSLLVIEKGAPGFTVDRALTKMGWHCSDTAELSFVDVEVPVANLVGEENAGFYYI
CCCCCEEEEEEECCCCCCHHHHHHHHHCCCCCCCCCEEEEEEECCHHHHCCCCCCCEEEH
AEQFVVERLALAVHAYGIAARSLELTAAYCRDRETFGRPLIANQVVRHKLVEMRRQVEVA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHCCCHHHHHHHHHHHHHHHHHHHHH
RAYAREVARRHAAGESVIAEVCLAKQTACDAATYVCDQAVQLHGGTGYMHGTEVERHYRD
HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCHHHHHHCC
ARILPIGGGATEVLTDLAAKLLGYAR
CEEEEECCCHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8759838; 8969508; 9384377 [H]