Definition Nocardioides sp. JS614 chromosome, complete genome.
Accession NC_008699
Length 4,985,871

Click here to switch to the map view.

The map label for this gene is 119718734

Identifier: 119718734

GI number: 119718734

Start: 4775675

End: 4776229

Strand: Reverse

Name: 119718734

Synonym: Noca_4515

Alternate gene names: NA

Gene position: 4776229-4775675 (Counterclockwise)

Preceding gene: 119718743

Following gene: 119718733

Centisome position: 95.8

GC content: 74.59

Gene sequence:

>555_bases
ATGCTGCTCCTGGTGGTGGTGTCCGCGGCGGCGTGCCTGCTGCTGGTAGTAGCGCTGGGGCGCAGGCTCGGGTGGGTCAC
CGCCGGGTCGCTCGGCGGACTGGTCTGGTCCCTGGCGGTGATCGCCTCGATCACGCTGATCCCGGCGAACGGCGCGCCCG
GGATCGTGCCTGTGGAGGGCCGGCTGACCGGCTGCTCGTGGGACGTCGGCGGGCCGGCGCCGGACGGGTTCTGGATCTTC
TCCGGGGGGCAGCGGCTGCTCAACACCGTCGTCTTCGTGCCGCCCGGTGCCCTGCTCGTCTTCGCGGCCGCCCGGTGGCG
GGCCGCCTGGGTGCTGGTGCCGGCCGGACTGGCCCTGCTGGCCAGCTACTCGGCGGCGATCGAGGGCACCCAGCTCGCGC
TGGCCCGGCTGGACCGGGCCTGCGACGTGACCGACGTGGTCGACAACGTCACCGGCGCGGTGGTCGGGGTCGGGATCGGG
ATCGTGCTGGCGGTGCTGCTGCGGCCCTGGCGGCGGCGTCCCCATCGACCCGCGGCCCGAGAAGTGCGTCACTAG

Upstream 100 bases:

>100_bases
GTTCCGGTTTCCCCGGTGAACCGGGGAAACCAACCCCGGTCGCCGCCGCAGCCGGGCGGCTACGGTCAGGGGCGTGTTCC
CGGTCGGCGGTGTGGGGGTG

Downstream 100 bases:

>100_bases
GGTGAGCCCATGACCAGCCCCCAGCCCCGGCGCACGGTCGCTGCGATCCCGCCGTACGTCGCCGGGAAGCCGCCGACGGT
CCGACCCGGGATGACGTCGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 184; Mature: 184

Protein sequence:

>184_residues
MLLLVVVSAAACLLLVVALGRRLGWVTAGSLGGLVWSLAVIASITLIPANGAPGIVPVEGRLTGCSWDVGGPAPDGFWIF
SGGQRLLNTVVFVPPGALLVFAAARWRAAWVLVPAGLALLASYSAAIEGTQLALARLDRACDVTDVVDNVTGAVVGVGIG
IVLAVLLRPWRRRPHRPAAREVRH

Sequences:

>Translated_184_residues
MLLLVVVSAAACLLLVVALGRRLGWVTAGSLGGLVWSLAVIASITLIPANGAPGIVPVEGRLTGCSWDVGGPAPDGFWIF
SGGQRLLNTVVFVPPGALLVFAAARWRAAWVLVPAGLALLASYSAAIEGTQLALARLDRACDVTDVVDNVTGAVVGVGIG
IVLAVLLRPWRRRPHRPAAREVRH
>Mature_184_residues
MLLLVVVSAAACLLLVVALGRRLGWVTAGSLGGLVWSLAVIASITLIPANGAPGIVPVEGRLTGCSWDVGGPAPDGFWIF
SGGQRLLNTVVFVPPGALLVFAAARWRAAWVLVPAGLALLASYSAAIEGTQLALARLDRACDVTDVVDNVTGAVVGVGIG
IVLAVLLRPWRRRPHRPAAREVRH

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19106; Mature: 19106

Theoretical pI: Translated: 11.38; Mature: 11.38

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
0.5 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLLLVVVSAAACLLLVVALGRRLGWVTAGSLGGLVWSLAVIASITLIPANGAPGIVPVEG
CHHHHHHHHHHHHHHHHHHHHHHCCEECCHHHHHHHHHHHHHHHEEEECCCCCCEEECCC
RLTGCSWDVGGPAPDGFWIFSGGQRLLNTVVFVPPGALLVFAAARWRAAWVLVPAGLALL
EEECCCCCCCCCCCCCEEEECCCHHHHHEEEECCCCHHHHHHHHHHHEEEEEHHHHHHHH
ASYSAAIEGTQLALARLDRACDVTDVVDNVTGAVVGVGIGIVLAVLLRPWRRRPHRPAAR
HHHHHHHCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHH
EVRH
HCCC
>Mature Secondary Structure
MLLLVVVSAAACLLLVVALGRRLGWVTAGSLGGLVWSLAVIASITLIPANGAPGIVPVEG
CHHHHHHHHHHHHHHHHHHHHHHCCEECCHHHHHHHHHHHHHHHEEEECCCCCCEEECCC
RLTGCSWDVGGPAPDGFWIFSGGQRLLNTVVFVPPGALLVFAAARWRAAWVLVPAGLALL
EEECCCCCCCCCCCCCEEEECCCHHHHHEEEECCCCHHHHHHHHHHHEEEEEHHHHHHHH
ASYSAAIEGTQLALARLDRACDVTDVVDNVTGAVVGVGIGIVLAVLLRPWRRRPHRPAAR
HHHHHHHCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHH
EVRH
HCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA