| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is 119718743
Identifier: 119718743
GI number: 119718743
Start: 4783250
End: 4785103
Strand: Reverse
Name: 119718743
Synonym: Noca_4524
Alternate gene names: NA
Gene position: 4785103-4783250 (Counterclockwise)
Preceding gene: 119718744
Following gene: 119718734
Centisome position: 95.97
GC content: 71.41
Gene sequence:
>1854_bases ATGGCCATCCACCGTCACCCCAGCCGCCTCCACCGAGGCATCGCAGTGCTCGCAGCCGTCTCGGCCGCCGTCCTTCCGCT CGCCCTCGCCTCGGTCGCCGAGGCCGCCGCCGGGCCCGACGGCCCGGTCAGCGTCGACAGCCCCTACGTGAAGGCCAACG GCGCGGCGCCGTCGACCGGAGACGCCATCACCACCTGCGGCACCAACCGCCGGCAGCAGAACGAGCCGACCGCCGCGGTC GACCCCGGCAACCCGAGCATCGTCACCTCCGGGTCGAACGACTACTGCACCGTCGAGCTCGCCGGTGGCACCTGGGCCGG CTTCTACCGGTCCACCGACGGGGGCGGCACCTGGACGGACTCGCTGCTGCCCGGCTACCCCACCGACAGCTCGGCGGAGG GCCTCGCGAGCCCGCTGCACCAGCGCGGCATCACCAACGCCGGTGACCCGGTACAGGCGTGGGACCGCGACGGCCGCCTG TTCTACATGGGCAACGCGTTCAACCGCGTTGCGCCCCAGAACGGCAGCGTCTGGGTCGCGACCTACGACCAGCACGCCGC GCACTACGTGCGCACGGTGATCGTCGGCAAGGGCACCCCGGCGCTGTCCGGGAAGTTCAACGACAAGACCTCGATCGAGG TCGACCGGGGACTGTCGAGCGCGTTCGCCGGCAACGTCTACGTCGCCTGGAGCGTGTTCCAGGGGGGCGGCAACAACGAG ATCATGTTCGCCCGGTCCACCGACCACGGGCGGACCTTCAGCAACCCGACCCGGATCTCCGAGGGCTCGCTCGGCAACCA GTTCGCCGACATCGCGGTGACCCGGGACGGCACGGTCTACGTCGCATGGAACGGCACGGTGGGCAGTCGCGCCACCGGCC ACGACGCGATGCTGTGGGTCCGCTCGACCGACGGCGGCCGCAGCTTCACCAAGCCCGCTGTGGCGGCGGAGTTCGACGGC TTCGACGCCGCCGACTCGGCGGGCCACCCCGAGGCGGCCCAGCAGGCGCACGAGGACGCGTTCGAGCACGCCGACGGTCC GGAGTCCGACGTGGAGCCCGGCTCGGCCGGAGACTCCCGCGACTGCGGCTCCGGCCCCTTCGCGTGCCGGAGCGGCTTCG TGTTCTTCCGGCACGACAGCCAGCCGAGGATCACCGCCGACCCCGCGGACGCCTCCAACACCGTCTACATGGTGTACGAC GCCACGATCCCCTCGACCGAGGTCCCGTCGACGTCGACGTACAACACCGCACCGGTGCGCAACGGCACGCTGATGGTCGG ACAGGGTGCGGTCTACCTGACCATGAAGGTCGGCGACGGCGGCTGGGCGACGCCGCGGCTGCTCGCACCGACCCCGGTCG GTCACCAGCTGTTCCCGGACATCAGCGCCGACGGCGGATACCTGTTCGCGCTCTGGCACGACAGCCGCAACGACCCCGGC TACAGCGTCCAGAACCCGCCGGGCAACGCGTCGGCGACCGACGACGCCGGCTTCCACCTGCCGACGATCGGGCTCGACAC GTACGGCGCGTCCTCGGCCGACGGCGGCACGACCTGGTCGCTGGTCCGGTTGTCGTCGGGCTCGCAGCTGCCGAACTACG AGATGTTCGGTGACCGCCGGGTCCCGTTCCACGGCGACTACAACTACGTGTCGAGCGTCGGGAACTTCGCCTTCGGCACC TGGACCGACACCCGGCAGGTGGTCGGCGGTGACGACCCGCGCTACGACGGTGGGGAGGGGTTCGACGTCCTGCAGTGCCG GACCGCGAGCACGGACGGCAGCTTCGGCGCCGACACTTGCCCGAACGCGGGAGGCCTCGACCAGGACGTCTTCGGCGCGG CGTTCAGCCACTGA
Upstream 100 bases:
>100_bases GCGAGATGGCTCACGCCGGCTCCGCCCCACCAGCGCGGATCCCGGTCGGACCCACGGCACCGATCACGATGCCGCGCCAT CGCTTCTTTTCGGGAGAGTC
Downstream 100 bases:
>100_bases GCAGCCACGGACGCGCGTGGGGGTCGGGCCGACCGGTCCGCCCCCACGGCGCGGCGCTCAGCCTCAGTCCGAGCAGATCT GCGCGAACGCGCCGACCAGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 617; Mature: 616
Protein sequence:
>617_residues MAIHRHPSRLHRGIAVLAAVSAAVLPLALASVAEAAAGPDGPVSVDSPYVKANGAAPSTGDAITTCGTNRRQQNEPTAAV DPGNPSIVTSGSNDYCTVELAGGTWAGFYRSTDGGGTWTDSLLPGYPTDSSAEGLASPLHQRGITNAGDPVQAWDRDGRL FYMGNAFNRVAPQNGSVWVATYDQHAAHYVRTVIVGKGTPALSGKFNDKTSIEVDRGLSSAFAGNVYVAWSVFQGGGNNE IMFARSTDHGRTFSNPTRISEGSLGNQFADIAVTRDGTVYVAWNGTVGSRATGHDAMLWVRSTDGGRSFTKPAVAAEFDG FDAADSAGHPEAAQQAHEDAFEHADGPESDVEPGSAGDSRDCGSGPFACRSGFVFFRHDSQPRITADPADASNTVYMVYD ATIPSTEVPSTSTYNTAPVRNGTLMVGQGAVYLTMKVGDGGWATPRLLAPTPVGHQLFPDISADGGYLFALWHDSRNDPG YSVQNPPGNASATDDAGFHLPTIGLDTYGASSADGGTTWSLVRLSSGSQLPNYEMFGDRRVPFHGDYNYVSSVGNFAFGT WTDTRQVVGGDDPRYDGGEGFDVLQCRTASTDGSFGADTCPNAGGLDQDVFGAAFSH
Sequences:
>Translated_617_residues MAIHRHPSRLHRGIAVLAAVSAAVLPLALASVAEAAAGPDGPVSVDSPYVKANGAAPSTGDAITTCGTNRRQQNEPTAAV DPGNPSIVTSGSNDYCTVELAGGTWAGFYRSTDGGGTWTDSLLPGYPTDSSAEGLASPLHQRGITNAGDPVQAWDRDGRL FYMGNAFNRVAPQNGSVWVATYDQHAAHYVRTVIVGKGTPALSGKFNDKTSIEVDRGLSSAFAGNVYVAWSVFQGGGNNE IMFARSTDHGRTFSNPTRISEGSLGNQFADIAVTRDGTVYVAWNGTVGSRATGHDAMLWVRSTDGGRSFTKPAVAAEFDG FDAADSAGHPEAAQQAHEDAFEHADGPESDVEPGSAGDSRDCGSGPFACRSGFVFFRHDSQPRITADPADASNTVYMVYD ATIPSTEVPSTSTYNTAPVRNGTLMVGQGAVYLTMKVGDGGWATPRLLAPTPVGHQLFPDISADGGYLFALWHDSRNDPG YSVQNPPGNASATDDAGFHLPTIGLDTYGASSADGGTTWSLVRLSSGSQLPNYEMFGDRRVPFHGDYNYVSSVGNFAFGT WTDTRQVVGGDDPRYDGGEGFDVLQCRTASTDGSFGADTCPNAGGLDQDVFGAAFSH >Mature_616_residues AIHRHPSRLHRGIAVLAAVSAAVLPLALASVAEAAAGPDGPVSVDSPYVKANGAAPSTGDAITTCGTNRRQQNEPTAAVD PGNPSIVTSGSNDYCTVELAGGTWAGFYRSTDGGGTWTDSLLPGYPTDSSAEGLASPLHQRGITNAGDPVQAWDRDGRLF YMGNAFNRVAPQNGSVWVATYDQHAAHYVRTVIVGKGTPALSGKFNDKTSIEVDRGLSSAFAGNVYVAWSVFQGGGNNEI MFARSTDHGRTFSNPTRISEGSLGNQFADIAVTRDGTVYVAWNGTVGSRATGHDAMLWVRSTDGGRSFTKPAVAAEFDGF DAADSAGHPEAAQQAHEDAFEHADGPESDVEPGSAGDSRDCGSGPFACRSGFVFFRHDSQPRITADPADASNTVYMVYDA TIPSTEVPSTSTYNTAPVRNGTLMVGQGAVYLTMKVGDGGWATPRLLAPTPVGHQLFPDISADGGYLFALWHDSRNDPGY SVQNPPGNASATDDAGFHLPTIGLDTYGASSADGGTTWSLVRLSSGSQLPNYEMFGDRRVPFHGDYNYVSSVGNFAFGTW TDTRQVVGGDDPRYDGGEGFDVLQCRTASTDGSFGADTCPNAGGLDQDVFGAAFSH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 64593; Mature: 64461
Theoretical pI: Translated: 4.61; Mature: 4.61
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAIHRHPSRLHRGIAVLAAVSAAVLPLALASVAEAAAGPDGPVSVDSPYVKANGAAPSTG CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCCCC DAITTCGTNRRQQNEPTAAVDPGNPSIVTSGSNDYCTVELAGGTWAGFYRSTDGGGTWTD CEEEECCCCCCCCCCCCEEECCCCCCEEECCCCCEEEEEECCCEEEEEEEECCCCCEECC SLLPGYPTDSSAEGLASPLHQRGITNAGDPVQAWDRDGRLFYMGNAFNRVAPQNGSVWVA CCCCCCCCCCCHHHHHHHHHHCCCCCCCCCHHHHCCCCCEEEECCCCCCCCCCCCCEEEE TYDQHAAHYVRTVIVGKGTPALSGKFNDKTSIEVDRGLSSAFAGNVYVAWSVFQGGGNNE ECCHHHHEEEEEEEEECCCCCCCCCCCCCCEEEECCCCCHHHCCCEEEEEEEEECCCCCE IMFARSTDHGRTFSNPTRISEGSLGNQFADIAVTRDGTVYVAWNGTVGSRATGHDAMLWV EEEEECCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCEEEEEECCCCCCCCCCCCEEEEE RSTDGGRSFTKPAVAAEFDGFDAADSAGHPEAAQQAHEDAFEHADGPESDVEPGSAGDSR EECCCCCCCCCCCCEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC DCGSGPFACRSGFVFFRHDSQPRITADPADASNTVYMVYDATIPSTEVPSTSTYNTAPVR CCCCCCCHHHCCEEEEEECCCCCEEECCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCC NGTLMVGQGAVYLTMKVGDGGWATPRLLAPTPVGHQLFPDISADGGYLFALWHDSRNDPG CCEEEEECCEEEEEEEECCCCCCCCEEECCCCCCHHHCCCCCCCCCEEEEEEECCCCCCC YSVQNPPGNASATDDAGFHLPTIGLDTYGASSADGGTTWSLVRLSSGSQLPNYEMFGDRR CCCCCCCCCCCCCCCCCEECCEECCCCCCCCCCCCCCEEEEEEECCCCCCCCCHHCCCCC VPFHGDYNYVSSVGNFAFGTWTDTRQVVGGDDPRYDGGEGFDVLQCRTASTDGSFGADTC CCCCCCHHHHHHCCCCEEECCCCCHHHCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCC PNAGGLDQDVFGAAFSH CCCCCCCHHHHHHHHCC >Mature Secondary Structure AIHRHPSRLHRGIAVLAAVSAAVLPLALASVAEAAAGPDGPVSVDSPYVKANGAAPSTG CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCCCC DAITTCGTNRRQQNEPTAAVDPGNPSIVTSGSNDYCTVELAGGTWAGFYRSTDGGGTWTD CEEEECCCCCCCCCCCCEEECCCCCCEEECCCCCEEEEEECCCEEEEEEEECCCCCEECC SLLPGYPTDSSAEGLASPLHQRGITNAGDPVQAWDRDGRLFYMGNAFNRVAPQNGSVWVA CCCCCCCCCCCHHHHHHHHHHCCCCCCCCCHHHHCCCCCEEEECCCCCCCCCCCCCEEEE TYDQHAAHYVRTVIVGKGTPALSGKFNDKTSIEVDRGLSSAFAGNVYVAWSVFQGGGNNE ECCHHHHEEEEEEEEECCCCCCCCCCCCCCEEEECCCCCHHHCCCEEEEEEEEECCCCCE IMFARSTDHGRTFSNPTRISEGSLGNQFADIAVTRDGTVYVAWNGTVGSRATGHDAMLWV EEEEECCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCEEEEEECCCCCCCCCCCCEEEEE RSTDGGRSFTKPAVAAEFDGFDAADSAGHPEAAQQAHEDAFEHADGPESDVEPGSAGDSR EECCCCCCCCCCCCEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC DCGSGPFACRSGFVFFRHDSQPRITADPADASNTVYMVYDATIPSTEVPSTSTYNTAPVR CCCCCCCHHHCCEEEEEECCCCCEEECCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCC NGTLMVGQGAVYLTMKVGDGGWATPRLLAPTPVGHQLFPDISADGGYLFALWHDSRNDPG CCEEEEECCEEEEEEEECCCCCCCCEEECCCCCCHHHCCCCCCCCCEEEEEEECCCCCCC YSVQNPPGNASATDDAGFHLPTIGLDTYGASSADGGTTWSLVRLSSGSQLPNYEMFGDRR CCCCCCCCCCCCCCCCCEECCEECCCCCCCCCCCCCCEEEEEEECCCCCCCCCHHCCCCC VPFHGDYNYVSSVGNFAFGTWTDTRQVVGGDDPRYDGGEGFDVLQCRTASTDGSFGADTC CCCCCCHHHHHHCCCCEEECCCCCHHHCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCC PNAGGLDQDVFGAAFSH CCCCCCCHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA