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The map label for this gene is 119718597

Identifier: 119718597

GI number: 119718597

Start: 4628107

End: 4629318

Strand: Reverse

Name: 119718597

Synonym: Noca_4378

Alternate gene names: NA

Gene position: 4629318-4628107 (Counterclockwise)

Preceding gene: 119718598

Following gene: 119718596

Centisome position: 92.85

GC content: 76.07

Gene sequence:

>1212_bases
GTGAGCGCGCTCGACCGGCCCGCCCTGGACCCGCCTGCCCGCGAGCTGCCTGCCCGGGAGCTGCCTGCCCTCGAGTTGTT
GAGCGGTGACGCCCAGACCTTCCTGGCGAAGGTCTGGGCGTCGCGCGTGCACCTGCACCGCAGCGGCCCCGCCGACCCCG
ACAGCCCCGGCAGCGCCGACGGCCCGGACAGCCTGGTCGGGCTGTTCGCGCTCGCCGACGCCGACCACCTGCTGACCTCG
AGCGCCGTCCGGACGCCGTCGATCCGGCTGGCCAAGGACGGCGCGGTGCTCCCGGAGTCGGCGTACACCCGACGGGCGAG
CCTCGCCGGCAAGCCGCTGACCGGGCTGGTCGACGCCCGCAAGGCGCTGGCGCTCTTCGACGACGGCGCGACCGTCGTCT
TCCAGGGCCTGCACCGCTACTGGCCCCCGCTGACCCGGCTGATCGCCCGGCTCGAGCTCGAGCTGGGCCACCCGTGCCAG
GCCAACGCGTACCTCACCCCGCCGGGCGCGCAGGGCTTCGCGGTGCACTCGGACTCCCACGACGTGTTCGTGTTCCAGAC
CGCCGGCTCGAAGCGCTGGGAGGTGCACGGGCCGGACGGCCCCGAGGAGGTGCTGCTCGAGCCCGGGGTGTCGATGTACC
TGCCGACCGGCACGCCGCACGCGGCCCGTGCCCAGGACACCGTCTCCTTGCACGTCACGCTCGGCATCAACCAGCTCACC
TGGCGCGGCCTGGTCGAGCGGACCGTGGCCGGGGCCCTCGGCGAGGTGGCCGACGAGCACCTGCCGGCCGGCTACCTCGA
CGACCCGGCCGCGCTCGCCGGCCCGCTCGCGGACCGGCTCGAGCGACTCGCGGACGCCGTCCGCCGCCTGGACGCGACCG
CCGCCGTCGAGGCCGAGGTGCGGCGGTTCCTCACCTCGCGGCCGCCGCGCCTGGACGGCGGGCTGCACGACGTGCTCGCC
CACGGCACGATCACCGACACCACCCTGCTGCGCCGCCGGCCCGGCCACCCCTGCGTGCTCCTCGACCGGGGTGAGCGGGT
CGAGGTGCTGCTCGGCGACCGGTCGCTGACCGTGCCCGCGTGGATCCGCCCGGCACTCGAGGCGGTCCGCGCTCGCGGCG
AGCTGACGCCGGCCGACCTGCCGCTCGACGAGCAGAGCCGCCTGGTGCTGTGCCGACGACTGGTCCGGGAGGGCCTCCTG
GAGGTCCGGTGA

Upstream 100 bases:

>100_bases
CGGGGACGGGACCGACGGCGACGCGACCGACACCACCGACGGCGACGGCTCGGACAGTGACGGCACCGACGGCGACGGCA
CCGACGGGGACGCCTCCTGA

Downstream 100 bases:

>100_bases
GCCCGCCGCCTCCGGCATTCCGCTGTGCGGCCGCCAGCCTCCTGCGCGACGAGCCGGTCGCCGGCACCGCGACCCAGGTC
CGGGCCTGGCTCCTGGTCGA

Product: cupin 4 family protein

Products: NA

Alternate protein names: Cupin Superfamily Protein; LOW QUALITY PROTEIN Cupin 4 Family Protein; Transcription Factor Jumonji JmjC Domain-Containing Protein

Number of amino acids: Translated: 403; Mature: 402

Protein sequence:

>403_residues
MSALDRPALDPPARELPARELPALELLSGDAQTFLAKVWASRVHLHRSGPADPDSPGSADGPDSLVGLFALADADHLLTS
SAVRTPSIRLAKDGAVLPESAYTRRASLAGKPLTGLVDARKALALFDDGATVVFQGLHRYWPPLTRLIARLELELGHPCQ
ANAYLTPPGAQGFAVHSDSHDVFVFQTAGSKRWEVHGPDGPEEVLLEPGVSMYLPTGTPHAARAQDTVSLHVTLGINQLT
WRGLVERTVAGALGEVADEHLPAGYLDDPAALAGPLADRLERLADAVRRLDATAAVEAEVRRFLTSRPPRLDGGLHDVLA
HGTITDTTLLRRRPGHPCVLLDRGERVEVLLGDRSLTVPAWIRPALEAVRARGELTPADLPLDEQSRLVLCRRLVREGLL
EVR

Sequences:

>Translated_403_residues
MSALDRPALDPPARELPARELPALELLSGDAQTFLAKVWASRVHLHRSGPADPDSPGSADGPDSLVGLFALADADHLLTS
SAVRTPSIRLAKDGAVLPESAYTRRASLAGKPLTGLVDARKALALFDDGATVVFQGLHRYWPPLTRLIARLELELGHPCQ
ANAYLTPPGAQGFAVHSDSHDVFVFQTAGSKRWEVHGPDGPEEVLLEPGVSMYLPTGTPHAARAQDTVSLHVTLGINQLT
WRGLVERTVAGALGEVADEHLPAGYLDDPAALAGPLADRLERLADAVRRLDATAAVEAEVRRFLTSRPPRLDGGLHDVLA
HGTITDTTLLRRRPGHPCVLLDRGERVEVLLGDRSLTVPAWIRPALEAVRARGELTPADLPLDEQSRLVLCRRLVREGLL
EVR
>Mature_402_residues
SALDRPALDPPARELPARELPALELLSGDAQTFLAKVWASRVHLHRSGPADPDSPGSADGPDSLVGLFALADADHLLTSS
AVRTPSIRLAKDGAVLPESAYTRRASLAGKPLTGLVDARKALALFDDGATVVFQGLHRYWPPLTRLIARLELELGHPCQA
NAYLTPPGAQGFAVHSDSHDVFVFQTAGSKRWEVHGPDGPEEVLLEPGVSMYLPTGTPHAARAQDTVSLHVTLGINQLTW
RGLVERTVAGALGEVADEHLPAGYLDDPAALAGPLADRLERLADAVRRLDATAAVEAEVRRFLTSRPPRLDGGLHDVLAH
GTITDTTLLRRRPGHPCVLLDRGERVEVLLGDRSLTVPAWIRPALEAVRARGELTPADLPLDEQSRLVLCRRLVREGLLE
VR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI106879206, Length=234, Percent_Identity=30.3418803418803, Blast_Score=80, Evalue=4e-15,
Organism=Homo sapiens, GI110227621, Length=251, Percent_Identity=25.4980079681275, Blast_Score=74, Evalue=3e-13,
Organism=Homo sapiens, GI110227619, Length=251, Percent_Identity=25.4980079681275, Blast_Score=74, Evalue=3e-13,
Organism=Homo sapiens, GI23346418, Length=251, Percent_Identity=25.4980079681275, Blast_Score=74, Evalue=3e-13,
Organism=Caenorhabditis elegans, GI71991759, Length=272, Percent_Identity=27.2058823529412, Blast_Score=73, Evalue=3e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 43404; Mature: 43273

Theoretical pI: Translated: 6.28; Mature: 6.28

Prosite motif: PS00589 PTS_HPR_SER

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
0.5 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
0.2 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSALDRPALDPPARELPARELPALELLSGDAQTFLAKVWASRVHLHRSGPADPDSPGSAD
CCCCCCCCCCCCHHHCCCHHCCHHHHHCCCHHHHHHHHHHHHHHEECCCCCCCCCCCCCC
GPDSLVGLFALADADHLLTSSAVRTPSIRLAKDGAVLPESAYTRRASLAGKPLTGLVDAR
CHHHHHHHHHHHCHHHHHHHHHCCCCCEEEECCCCCCCCHHHHHHHHCCCCCCHHHHHHH
KALALFDDGATVVFQGLHRYWPPLTRLIARLELELGHPCQANAYLTPPGAQGFAVHSDSH
HHHEEECCCHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCEEECCCCCCCEEEECCCC
DVFVFQTAGSKRWEVHGPDGPEEVLLEPGVSMYLPTGTPHAARAQDTVSLHVTLGINQLT
CEEEEEECCCCEEEECCCCCHHHHHCCCCCEEEECCCCCCCCCCCCEEEEEEEECCCHHH
WRGLVERTVAGALGEVADEHLPAGYLDDPAALAGPLADRLERLADAVRRLDATAAVEAEV
HHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RRFLTSRPPRLDGGLHDVLAHGTITDTTLLRRRPGHPCVLLDRGERVEVLLGDRSLTVPA
HHHHHCCCCCCCCCHHHHHHCCCCCHHHHHHCCCCCCEEEEECCCEEEEEECCCCCCCHH
WIRPALEAVRARGELTPADLPLDEQSRLVLCRRLVREGLLEVR
HHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SALDRPALDPPARELPARELPALELLSGDAQTFLAKVWASRVHLHRSGPADPDSPGSAD
CCCCCCCCCCCHHHCCCHHCCHHHHHCCCHHHHHHHHHHHHHHEECCCCCCCCCCCCCC
GPDSLVGLFALADADHLLTSSAVRTPSIRLAKDGAVLPESAYTRRASLAGKPLTGLVDAR
CHHHHHHHHHHHCHHHHHHHHHCCCCCEEEECCCCCCCCHHHHHHHHCCCCCCHHHHHHH
KALALFDDGATVVFQGLHRYWPPLTRLIARLELELGHPCQANAYLTPPGAQGFAVHSDSH
HHHEEECCCHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCEEECCCCCCCEEEECCCC
DVFVFQTAGSKRWEVHGPDGPEEVLLEPGVSMYLPTGTPHAARAQDTVSLHVTLGINQLT
CEEEEEECCCCEEEECCCCCHHHHHCCCCCEEEECCCCCCCCCCCCEEEEEEEECCCHHH
WRGLVERTVAGALGEVADEHLPAGYLDDPAALAGPLADRLERLADAVRRLDATAAVEAEV
HHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RRFLTSRPPRLDGGLHDVLAHGTITDTTLLRRRPGHPCVLLDRGERVEVLLGDRSLTVPA
HHHHHCCCCCCCCCHHHHHHCCCCCHHHHHHCCCCCCEEEEECCCEEEEEECCCCCCCHH
WIRPALEAVRARGELTPADLPLDEQSRLVLCRRLVREGLLEVR
HHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA