| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is 119718596
Identifier: 119718596
GI number: 119718596
Start: 4627199
End: 4628110
Strand: Reverse
Name: 119718596
Synonym: Noca_4377
Alternate gene names: NA
Gene position: 4628110-4627199 (Counterclockwise)
Preceding gene: 119718597
Following gene: 119718595
Centisome position: 92.82
GC content: 76.75
Gene sequence:
>912_bases GTGAGCCCGCCGCCTCCGGCATTCCGCTGTGCGGCCGCCAGCCTCCTGCGCGACGAGCCGGTCGCCGGCACCGCGACCCA GGTCCGGGCCTGGCTCCTGGTCGAGCACACCGGGCCGTGGGGCGCCGACGCCCTGCTCGACGCCCGCCTGCCCGAGGGCG TCGGCCCGGCGCTCAAGGACCGGGCCCGGGCGCTGCGCGCGAAGATCCTGCTGATCCGGCGGTTCAGCTCGACGTCGGAC GGCGCCGGTGTGCGGGTGTTCGCCGCGCTGGCCGACCCGGTCCGGCCGCGGATCGAGGCCGGCCGGCTGGGCGACGTGCG CGAGGTGCTCGACCTCGACCTGGCCGGGTTCCGAGACGGTGGGTCGACCGGCCTGTCGGCGTACGACAGCGCGCTGTTCT GCGTGTGCACCAACGGCCGGCACGACGCCTGCTGTGCGGAGCGCGGCCGCCCGATCGCCCGGGCCCTGGACCGGGCGCAC CCCGAGGAGACCTGGGAGGTCTCGCACATCGGCGGCGACCGGTTCGCCGGCAACCTGGTGGTGCTGCCGCAGGGGCTCTA CTACGGGCGGCTCGATCCCGCCGCCGCGCTCGCGGTCGCGGGCGCCCACCTCGCCGGCGAGCTCGACCTGGACCACCTGC GCGGCCGCTCCTCCCAGCCGATGGCCGTGCAGGCCGCGGAGATCCTCCTGCGTCGCGAGCTGGGGGCGACCCGGGAGCCG GACGTCGTGCTCGTCGGTCGCTCGGTCGAGGCGGACCTGACCACGGCCGTCTTCGCGGTGGCGGGTGCGACGTACGACGT CCGGGTCCGGACCACCCGCGACCCGGCCACCGCCACGCAGCTGACCTGCAAGGCGCGCCGCGCGAACCCGGTGCCCGCTC ACGAGCTGCTCAGCGTGACGCGCCGGGTCTGA
Upstream 100 bases:
>100_bases GCGCTCGCGGCGAGCTGACGCCGGCCGACCTGCCGCTCGACGAGCAGAGCCGCCTGGTGCTGTGCCGACGACTGGTCCGG GAGGGCCTCCTGGAGGTCCG
Downstream 100 bases:
>100_bases CGGGAGGGTCGGGTGCCTGGCACGACGCCGCCGTGCGCCACCAGGTCGCCTTCCTCGCCCGGGTGCTCGCCCCGCGTTAC AGCGGCGGAGGTCGGACGTA
Product: sucraseferredoxin family protein
Products: NA
Alternate protein names: Sucrase; Sucrase Ferredoxin Family Protein
Number of amino acids: Translated: 303; Mature: 302
Protein sequence:
>303_residues MSPPPPAFRCAAASLLRDEPVAGTATQVRAWLLVEHTGPWGADALLDARLPEGVGPALKDRARALRAKILLIRRFSSTSD GAGVRVFAALADPVRPRIEAGRLGDVREVLDLDLAGFRDGGSTGLSAYDSALFCVCTNGRHDACCAERGRPIARALDRAH PEETWEVSHIGGDRFAGNLVVLPQGLYYGRLDPAAALAVAGAHLAGELDLDHLRGRSSQPMAVQAAEILLRRELGATREP DVVLVGRSVEADLTTAVFAVAGATYDVRVRTTRDPATATQLTCKARRANPVPAHELLSVTRRV
Sequences:
>Translated_303_residues MSPPPPAFRCAAASLLRDEPVAGTATQVRAWLLVEHTGPWGADALLDARLPEGVGPALKDRARALRAKILLIRRFSSTSD GAGVRVFAALADPVRPRIEAGRLGDVREVLDLDLAGFRDGGSTGLSAYDSALFCVCTNGRHDACCAERGRPIARALDRAH PEETWEVSHIGGDRFAGNLVVLPQGLYYGRLDPAAALAVAGAHLAGELDLDHLRGRSSQPMAVQAAEILLRRELGATREP DVVLVGRSVEADLTTAVFAVAGATYDVRVRTTRDPATATQLTCKARRANPVPAHELLSVTRRV >Mature_302_residues SPPPPAFRCAAASLLRDEPVAGTATQVRAWLLVEHTGPWGADALLDARLPEGVGPALKDRARALRAKILLIRRFSSTSDG AGVRVFAALADPVRPRIEAGRLGDVREVLDLDLAGFRDGGSTGLSAYDSALFCVCTNGRHDACCAERGRPIARALDRAHP EETWEVSHIGGDRFAGNLVVLPQGLYYGRLDPAAALAVAGAHLAGELDLDHLRGRSSQPMAVQAAEILLRRELGATREPD VVLVGRSVEADLTTAVFAVAGATYDVRVRTTRDPATATQLTCKARRANPVPAHELLSVTRRV
Specific function: Unknown
COG id: COG4759
COG function: function code O; Uncharacterized protein conserved in bacteria containing thioredoxin-like domain
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32281; Mature: 32150
Theoretical pI: Translated: 8.15; Mature: 8.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 0.3 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSPPPPAFRCAAASLLRDEPVAGTATQVRAWLLVEHTGPWGADALLDARLPEGVGPALKD CCCCCCHHHHHHHHHHHCCCCCCCHHHEEEEEEEEECCCCCCHHHHHCCCCCCCCHHHHH RARALRAKILLIRRFSSTSDGAGVRVFAALADPVRPRIEAGRLGDVREVLDLDLAGFRDG HHHHHHHHHHEEEECCCCCCCCCEEEEEEHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCC GSTGLSAYDSALFCVCTNGRHDACCAERGRPIARALDRAHPEETWEVSHIGGDRFAGNLV CCCCCHHHCCEEEEEECCCCCCCHHHHCCCHHHHHHHHCCCCCCEEEEECCCCCCCCCEE VLPQGLYYGRLDPAAALAVAGAHLAGELDLDHLRGRSSQPMAVQAAEILLRRELGATREP EEECCCEECCCCHHHHHHHHHHHHCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCC DVVLVGRSVEADLTTAVFAVAGATYDVRVRTTRDPATATQLTCKARRANPVPAHELLSVT CEEEECCCCCCHHHHHHHHHHCCEEEEEEEECCCCCHHHHHEEHHCCCCCCCHHHHHHHH RRV HCC >Mature Secondary Structure SPPPPAFRCAAASLLRDEPVAGTATQVRAWLLVEHTGPWGADALLDARLPEGVGPALKD CCCCCHHHHHHHHHHHCCCCCCCHHHEEEEEEEEECCCCCCHHHHHCCCCCCCCHHHHH RARALRAKILLIRRFSSTSDGAGVRVFAALADPVRPRIEAGRLGDVREVLDLDLAGFRDG HHHHHHHHHHEEEECCCCCCCCCEEEEEEHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCC GSTGLSAYDSALFCVCTNGRHDACCAERGRPIARALDRAHPEETWEVSHIGGDRFAGNLV CCCCCHHHCCEEEEEECCCCCCCHHHHCCCHHHHHHHHCCCCCCEEEEECCCCCCCCCEE VLPQGLYYGRLDPAAALAVAGAHLAGELDLDHLRGRSSQPMAVQAAEILLRRELGATREP EEECCCEECCCCHHHHHHHHHHHHCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCC DVVLVGRSVEADLTTAVFAVAGATYDVRVRTTRDPATATQLTCKARRANPVPAHELLSVT CEEEECCCCCCHHHHHHHHHHCCEEEEEEEECCCCCHHHHHEEHHCCCCCCCHHHHHHHH RRV HCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA