| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is 119718588
Identifier: 119718588
GI number: 119718588
Start: 4619415
End: 4619855
Strand: Reverse
Name: 119718588
Synonym: Noca_4369
Alternate gene names: NA
Gene position: 4619855-4619415 (Counterclockwise)
Preceding gene: 119718594
Following gene: 119718587
Centisome position: 92.66
GC content: 70.98
Gene sequence:
>441_bases GTGGACCTCCAGGAGATCAGCGACCGCCTCGAGATCGAGGGCGTGCTCGTCCGCTACACGCGCGCGATCGACGCCGGCGA CTGGGACGCGCTCGACAGCGTGTTCACCCCGGACGCGGAGATCGACTACACCGAGTCCGGCGGCATCGCCGACACCTATC CCGCGGTGAAGGCCTGGTTGGCCGAGGTGCTGCCGGCCTTCTTCCCGCGCCGGATGCACTCGCTGGCCCAGGTGGACGCC CGGCTCGACGGCGACACCGCACAGGTGACGGCGTACTTCCACAACCCGATGCCGCTGCCCGAGCCCGGGGGAGCCGACGG CCCGGACGCGACGAACATCGTCGAGTTCGGGGGGCTGTACCACCACACGATGGTGCGCACCGCCGACGGCTGGCGCAGCC GCCGCCTGCACGAGGAGATCGTCTGGAAGCGGGGCCTCTGA
Upstream 100 bases:
>100_bases GAGCGGCGCGTAGAACTGCGCCTGGGTCATCGCCTCGGCGTAGGTGAATCGCATGGGCCACACAGTAGAACGTGTTTCAG TTTTCTGCCAGAGTGTCTCC
Downstream 100 bases:
>100_bases GCGCACTCGGGCGGCGCCGGCCCGTTTGGTGGGGCTTGTGTGGGTCACCGACAATGGTGACGACGTACGACGCCACGACC CGGGGGAGATGACCGCGTGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 146; Mature: 146
Protein sequence:
>146_residues MDLQEISDRLEIEGVLVRYTRAIDAGDWDALDSVFTPDAEIDYTESGGIADTYPAVKAWLAEVLPAFFPRRMHSLAQVDA RLDGDTAQVTAYFHNPMPLPEPGGADGPDATNIVEFGGLYHHTMVRTADGWRSRRLHEEIVWKRGL
Sequences:
>Translated_146_residues MDLQEISDRLEIEGVLVRYTRAIDAGDWDALDSVFTPDAEIDYTESGGIADTYPAVKAWLAEVLPAFFPRRMHSLAQVDA RLDGDTAQVTAYFHNPMPLPEPGGADGPDATNIVEFGGLYHHTMVRTADGWRSRRLHEEIVWKRGL >Mature_146_residues MDLQEISDRLEIEGVLVRYTRAIDAGDWDALDSVFTPDAEIDYTESGGIADTYPAVKAWLAEVLPAFFPRRMHSLAQVDA RLDGDTAQVTAYFHNPMPLPEPGGADGPDATNIVEFGGLYHHTMVRTADGWRSRRLHEEIVWKRGL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16312; Mature: 16312
Theoretical pI: Translated: 4.40; Mature: 4.40
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDLQEISDRLEIEGVLVRYTRAIDAGDWDALDSVFTPDAEIDYTESGGIADTYPAVKAWL CCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHH AEVLPAFFPRRMHSLAQVDARLDGDTAQVTAYFHNPMPLPEPGGADGPDATNIVEFGGLY HHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCCCCCCHHHHHCCHH HHTMVRTADGWRSRRLHEEIVWKRGL HHHHHHCCCCHHHHHHHHHHHHHCCC >Mature Secondary Structure MDLQEISDRLEIEGVLVRYTRAIDAGDWDALDSVFTPDAEIDYTESGGIADTYPAVKAWL CCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHH AEVLPAFFPRRMHSLAQVDARLDGDTAQVTAYFHNPMPLPEPGGADGPDATNIVEFGGLY HHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCCCCCCHHHHHCCHH HHTMVRTADGWRSRRLHEEIVWKRGL HHHHHHCCCCHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]