| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is 119718587
Identifier: 119718587
GI number: 119718587
Start: 4618743
End: 4619318
Strand: Reverse
Name: 119718587
Synonym: Noca_4368
Alternate gene names: NA
Gene position: 4619318-4618743 (Counterclockwise)
Preceding gene: 119718588
Following gene: 119718585
Centisome position: 92.65
GC content: 73.26
Gene sequence:
>576_bases GTGTCCGAGCAGCCGCCCGAGCGCCCTGACGAACGCCACCCGATCGCCACCGGGCTGGTGGCGCTGGTCGGCGTCGCCGT CGTCGTGGGGCTGATCATGGGCCTGGTCGTGGTGGCCGGGGCCAGCGTGCTCGGTGTGGGCGGCGGCGGCACCGGCGCCG GGACGGGCTCGGAGCGGTCGATGTACCTGCCCCGACCGGAGAAGACCCCGGCGGCCACCGGGCCCGAGATCACGCTCGCG CCCGGGGCGTCGACGCCGGTGAGCAGCGGGCCGGCGACCGAGCCGACCAGGTCCAAGTCCGCGCGCAAGCAGATCACCCT CTCGGCGTCGGTCACCTCGGCCGGGCCGATGGAGACCTTCGACCTGACCGGCGTCTACCCGGGCGGCGAGGGAGCCATCC TGCAGGTGCAGCGGTTCACCGGTGGGTCGTGGCGGGACTTCCCCGTCACCGCCTCGGTCAGCGACGAGACGTTCCAGACC TCGGTGGCGACCAGCTACTCGGGCCCGAACCGGTTCCGGGTCGTCGACACCGACACCGGGCTGGAGTCCAACGAGATCAG GGTCACGATCGGCTGA
Upstream 100 bases:
>100_bases CTGAGCGCACTCGGGCGGCGCCGGCCCGTTTGGTGGGGCTTGTGTGGGTCACCGACAATGGTGACGACGTACGACGCCAC GACCCGGGGGAGATGACCGC
Downstream 100 bases:
>100_bases CGCCGGATCCGCAGCCGCGTCGCGATCGCGGGCTGGCCGGCGAGGATGCCGACGAGCACGAGGAGCATCCCGAGCGCCTG CGTCGGCCCGAACATCTCCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 191; Mature: 190
Protein sequence:
>191_residues MSEQPPERPDERHPIATGLVALVGVAVVVGLIMGLVVVAGASVLGVGGGGTGAGTGSERSMYLPRPEKTPAATGPEITLA PGASTPVSSGPATEPTRSKSARKQITLSASVTSAGPMETFDLTGVYPGGEGAILQVQRFTGGSWRDFPVTASVSDETFQT SVATSYSGPNRFRVVDTDTGLESNEIRVTIG
Sequences:
>Translated_191_residues MSEQPPERPDERHPIATGLVALVGVAVVVGLIMGLVVVAGASVLGVGGGGTGAGTGSERSMYLPRPEKTPAATGPEITLA PGASTPVSSGPATEPTRSKSARKQITLSASVTSAGPMETFDLTGVYPGGEGAILQVQRFTGGSWRDFPVTASVSDETFQT SVATSYSGPNRFRVVDTDTGLESNEIRVTIG >Mature_190_residues SEQPPERPDERHPIATGLVALVGVAVVVGLIMGLVVVAGASVLGVGGGGTGAGTGSERSMYLPRPEKTPAATGPEITLAP GASTPVSSGPATEPTRSKSARKQITLSASVTSAGPMETFDLTGVYPGGEGAILQVQRFTGGSWRDFPVTASVSDETFQTS VATSYSGPNRFRVVDTDTGLESNEIRVTIG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19445; Mature: 19314
Theoretical pI: Translated: 4.75; Mature: 4.75
Prosite motif: PS00227 TUBULIN ; PS00237 G_PROTEIN_RECEP_F1_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEQPPERPDERHPIATGLVALVGVAVVVGLIMGLVVVAGASVLGVGGGGTGAGTGSERS CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCC MYLPRPEKTPAATGPEITLAPGASTPVSSGPATEPTRSKSARKQITLSASVTSAGPMETF EECCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCHHEEEEEEECCCCCCCCEE DLTGVYPGGEGAILQVQRFTGGSWRDFPVTASVSDETFQTSVATSYSGPNRFRVVDTDTG EEEEECCCCCCCEEEEEECCCCCCCCCCEEECCCCCHHHHHHEECCCCCCEEEEEECCCC LESNEIRVTIG CCCCEEEEEEC >Mature Secondary Structure SEQPPERPDERHPIATGLVALVGVAVVVGLIMGLVVVAGASVLGVGGGGTGAGTGSERS CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCC MYLPRPEKTPAATGPEITLAPGASTPVSSGPATEPTRSKSARKQITLSASVTSAGPMETF EECCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCHHEEEEEEECCCCCCCCEE DLTGVYPGGEGAILQVQRFTGGSWRDFPVTASVSDETFQTSVATSYSGPNRFRVVDTDTG EEEEECCCCCCCEEEEEECCCCCCCCCCEEECCCCCHHHHHHEECCCCCCEEEEEECCCC LESNEIRVTIG CCCCEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA