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The map label for this gene is uidR [C]

Identifier: 119718546

GI number: 119718546

Start: 4577207

End: 4577755

Strand: Reverse

Name: uidR [C]

Synonym: Noca_4327

Alternate gene names: 119718546

Gene position: 4577755-4577207 (Counterclockwise)

Preceding gene: 119718548

Following gene: 119718545

Centisome position: 91.81

GC content: 72.31

Gene sequence:

>549_bases
GTGCGTGCCGATGCCAGGCGCAACTACGACCGGATCGTCGAGGTCGCGCGGGAGGTCTTCCGCGAGCAGGGGTACGACGC
CTCGCTCGACGAGATCGCCAAGCGCGCGGGCGTCGGCCCCGGCACCCTCTACCGGCACTTCCCGAAGCGGGAGAACCTGC
TCGACGCGGTCATGCAGTCCTGGGTCGACCGGGTGAACGACACCGCCGACAAGGCGATGGCGCGCGAGGGCTCGGCCCGC
GACGTGCTGCTGGGCTGGTTCGAGGACTACGTCCGGCTGATCAGCGTGCACCGAGGGGGCCCGGCGAAGATCACCTCCGC
GATGGGCGACCCCGACTCCCCGATCATCACCAAGTGCCAGGTGCTGGCCGGGGCCAACGACCGGGTGATCGAGCGGCTGC
GCGCCGACGGCGCCCTGCGTGCGGACATCGAGACCGTCCAGGTGTGCCGCCTGGTCGGCGGCGTCGCGACCGTCGCCGAC
CAGGGCGACCTGGACCCCGACGCCGTCCGCCCGATGCTCGAGGTCGTCGCCGACGGCCTGCTGCGCTAG

Upstream 100 bases:

>100_bases
CGGTACAGTAGATCCGGAGGATGGCTCCGCTTCCTGCACCACGATACGGAGACACTCTCCGGTTAGCAAGGGTTTCTTCG
TGATTGGGGTGAGCTCTTCC

Downstream 100 bases:

>100_bases
CGGGGGCGGTTTCCCCGGTGAACCGGGGAAACCGGAACTGTTGGCCCGAAGTTTCGGCCCAACAGTTCCAGTATTGCCCC
AACGACCCCCGGCGACCCGG

Product: regulatory protein TetR

Products: NA

Alternate protein names: Transcriptional Regulator TetR Family; Transcriptional Regulator; TetR-Family Transcriptional Regulator; Regulatory Protein TetR; TetR Family Transcriptional Regulatory Protein; TetR-Type Regulator; Transcription Regulator Protein; Tetr Family Transcriptional Regulator; TetR Family Protein Transcriptional Regulator; Transcriptional Regulator TetR Family Protein; LOW QUALITY PROTEIN TetR Family Transcriptional Regulator; Transcriptional Regulatory Protein; Transcriptional Regulator Tetr Family; Transcription Regulator Protein Tetr Family; TetR Family Transcription Regulator Protein; Transcriptional Regulator Protein; Transcription Regulator

Number of amino acids: Translated: 182; Mature: 182

Protein sequence:

>182_residues
MRADARRNYDRIVEVAREVFREQGYDASLDEIAKRAGVGPGTLYRHFPKRENLLDAVMQSWVDRVNDTADKAMAREGSAR
DVLLGWFEDYVRLISVHRGGPAKITSAMGDPDSPIITKCQVLAGANDRVIERLRADGALRADIETVQVCRLVGGVATVAD
QGDLDPDAVRPMLEVVADGLLR

Sequences:

>Translated_182_residues
MRADARRNYDRIVEVAREVFREQGYDASLDEIAKRAGVGPGTLYRHFPKRENLLDAVMQSWVDRVNDTADKAMAREGSAR
DVLLGWFEDYVRLISVHRGGPAKITSAMGDPDSPIITKCQVLAGANDRVIERLRADGALRADIETVQVCRLVGGVATVAD
QGDLDPDAVRPMLEVVADGLLR
>Mature_182_residues
MRADARRNYDRIVEVAREVFREQGYDASLDEIAKRAGVGPGTLYRHFPKRENLLDAVMQSWVDRVNDTADKAMAREGSAR
DVLLGWFEDYVRLISVHRGGPAKITSAMGDPDSPIITKCQVLAGANDRVIERLRADGALRADIETVQVCRLVGGVATVAD
QGDLDPDAVRPMLEVVADGLLR

Specific function: Repressor For The Uidrabc (Gusrabc) Operon. [C]

COG id: COG1309

COG function: function code K; Transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20046; Mature: 20046

Theoretical pI: Translated: 5.11; Mature: 5.11

Prosite motif: PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRADARRNYDRIVEVAREVFREQGYDASLDEIAKRAGVGPGTLYRHFPKRENLLDAVMQS
CCCCHHCCHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCHHHHHHCCCHHHHHHHHHHH
WVDRVNDTADKAMAREGSARDVLLGWFEDYVRLISVHRGGPAKITSAMGDPDSPIITKCQ
HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCCHHHHHH
VLAGANDRVIERLRADGALRADIETVQVCRLVGGVATVADQGDLDPDAVRPMLEVVADGL
HHHCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH
LR
CC
>Mature Secondary Structure
MRADARRNYDRIVEVAREVFREQGYDASLDEIAKRAGVGPGTLYRHFPKRENLLDAVMQS
CCCCHHCCHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCHHHHHHCCCHHHHHHHHHHH
WVDRVNDTADKAMAREGSARDVLLGWFEDYVRLISVHRGGPAKITSAMGDPDSPIITKCQ
HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCCHHHHHH
VLAGANDRVIERLRADGALRADIETVQVCRLVGGVATVADQGDLDPDAVRPMLEVVADGL
HHHCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH
LR
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA