| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is purL
Identifier: 119718545
GI number: 119718545
Start: 4574768
End: 4577023
Strand: Reverse
Name: purL
Synonym: Noca_4326
Alternate gene names: 119718545
Gene position: 4577023-4574768 (Counterclockwise)
Preceding gene: 119718546
Following gene: 119718544
Centisome position: 91.8
GC content: 73.01
Gene sequence:
>2256_bases GTGCTCGACACCGTCGCCGTCGCCGCCGAGGACCCCCACCACGACCAGCCGTGGGCCGACCTCGGCCTCAAGGCCGACGA GTACGCCCGGATCCGCGAGATCCTCGGCCGCCGGCCCACGAGCTCCGAGCTCGCGATGTACTCGGTGATGTGGAGCGAGC ACTGCTCCTACAAGAGCTCCAAGGTGCACCTCAAGCAGTTCTCCGAGCTCGCCGAGGTGCTCGCTCAGCGCCAGCCCGAC GCCGGGCGCCTGCTCGCCGGCATCGGCGAGAACGCCGGCGTGGTCGACATCGGCCAGGGCTATGCGGTCACCTTCAAGGT CGAGTCGCACAACCACCCGTCGTACGTCGAGCCCTACCAGGGCGCGGCCACCGGCGTCGGCGGCATCGTCCGCGACATTC TGGCCATGGGGGCCCGCCCCGTCGCCGTGATGGATCCGCTGCGGTTCGGGCCGCTCGACGCGGACGACACGCACCGGGTG CTGCCCGGGATCGTCGCGGGGGTGGGTGGCTACGGCAACTGTCTGGGCCTGCCGAACATCGGCGGCGAGGCGGTCTTCGA CGCGACGTATCTCGGCAACCCGCTGGTCAACGCGCTGTGCGTGGGTGTGCTCCGCCACGAGGACCTGCACCTCGCCAAGG CGTCCGGCGTCGGCAACCAGGTGATCCTGTACGGCGCCCGCACCGGCGGCGACGGCATCGGCGGCGTCAGCGTGCTCGCC AGCGAGACCTTCGACGCCGACGGCCCCGCCAAGCGGCCGAGCGTCCAGGTCGGCGACCCCTTCATGGAGAAGCTGCTCAT CGAGTGCACGCTCGAGATCTTCGCCGCCGGCCTGGTCGCCGGCATCCAGGACCTCGGCGGCGCCGGCCTGTCCTGCGCCA CCTCGGAGCTCGCGTCCGCCGGCGACGGCGGCATGCACGTCGAGCTCGACCGGGTCCCCCTGCGCGACTCCACGCTCGCG CCGGAGGAGATCTTGATGAGCGAGTCGCAGGAGCGGATGATGGCGGTCGTCGAGCCCGACGACGTCGCGGCGTTCCTCGC GATCTGCGCGAAGTGGGACGTCGAGGCCGTCGTGGTCGGCGAGGTCACCGACACCGGGCGGCTCCAGATCGACTGGCACG GCGAGCGCGTGGTCGACGTCCCGCCGCGGAGCGTCGCGCACGACGGGCCGACGTACCACCGCCCCTTCGCCCGGCCCGCC TGGCAGGACGACCTGCAGGCCGACGCCGCGGAGTCGCTGCCGCGCCCGGGCTCGGGCGACGAGCTGCGCAAGACCCTGCT GACCCTGGTCGCCAGCCCCAACCTGTGCGACAAGTCGTGGATCACCGACCAGTACGACCGTTACGTGCGCGGCAACACCG TGCTCGCGCAGCCCAGCGACAGCGGCATGGTCCGCGTCGACGAGGAGACCGACCTCGGCGTCGCGCTCGCGACCGACTGC AACGGCCGGTTCGCGCTCCTCGACCCGTACGCAGGCGCCCAGCTCGCCCTCGCGGAGGCCTACCGCAACGTGGCCACCGG CGGCGCGACGCCGCTGGCGATCTCCGACTGCCTCAACTTCGGCTCACCCGAGGACCCGGCCGTGATGTGGCAGTTCGCCG AGGCGTGCCGCGGCCTGAAGGACGGCTGCCTCGAGCTCGGCATCCCGGTCACCGGCGGCAACGTCAGCCTCTACAACCAG ACGGGCGAGACCGCGATCCTCCCGACCCCGGTGGTCGCCGTGCTCGGCGTGATCGAGGACGTCACCCGCCGTACGCCGTC GGCCTGGTCGACCGGGGGTGAGCGGGTCTTCCTGCTGGGCGAGACCCGCGAGGAGCTCTCGGGGTCGGAGTGGGCGCACG TCGTCCACGGCCATCTCGGCGGGCTCCCGCCGCAGCTCGACCTGGAGGCCGAGCGCACCCTCGCCGAGCTGCTCCACGAC GCCGTCGGCCTGGTCAGCTCCGCCCACGACCTCTCCGACGGCGGGCTCGCGCAGGCGCTCGTCGAGGGCGCCCTGCGCCA CGGCGTGGGCGTGTCCGTCGAGGTCCCCGACGACGCGTTCGTCGGGCTCTTCAGCGAGTCGCCGGGCCGGGTCGTCGTGA CCGTCCCCGACGGTGCCGCCGAGCGGCTGGTCGAGCTCGCCGAGCGCCACGGGGTCGAGCTGACCGCGCTCGGCGTCACC GGTGGCGACGCCCTGGTGGTCGAGGGCCAGTTCGAGATCCCGCTCGACGAGCTGCGCGACGCCTGGACCACCACCCTGCC CGCGGCGCTCGGCTGA
Upstream 100 bases:
>100_bases GACCCCCGGCGACCCGGCTGCCGACCCCACCCGCGGTCCCGCCATGGTCCGGCCTGCGGGCGGATGTGGTGGCGCTGTCG CGCGCCGGTAGATTGGCGTC
Downstream 100 bases:
>100_bases CGGTGCGCGGGCTTGCCGGCGGCGGTTTCCCCGGTTGGCCGGGGAAACCGGAACCTGTCGGCCGAAACTTCGCCCGCGAA GTTCCGGTATTGCCCGTCCG
Product: phosphoribosylformylglycinamidine synthase II
Products: NA
Alternate protein names: Phosphoribosylformylglycinamidine synthase II; FGAM synthase II
Number of amino acids: Translated: 751; Mature: 751
Protein sequence:
>751_residues MLDTVAVAAEDPHHDQPWADLGLKADEYARIREILGRRPTSSELAMYSVMWSEHCSYKSSKVHLKQFSELAEVLAQRQPD AGRLLAGIGENAGVVDIGQGYAVTFKVESHNHPSYVEPYQGAATGVGGIVRDILAMGARPVAVMDPLRFGPLDADDTHRV LPGIVAGVGGYGNCLGLPNIGGEAVFDATYLGNPLVNALCVGVLRHEDLHLAKASGVGNQVILYGARTGGDGIGGVSVLA SETFDADGPAKRPSVQVGDPFMEKLLIECTLEIFAAGLVAGIQDLGGAGLSCATSELASAGDGGMHVELDRVPLRDSTLA PEEILMSESQERMMAVVEPDDVAAFLAICAKWDVEAVVVGEVTDTGRLQIDWHGERVVDVPPRSVAHDGPTYHRPFARPA WQDDLQADAAESLPRPGSGDELRKTLLTLVASPNLCDKSWITDQYDRYVRGNTVLAQPSDSGMVRVDEETDLGVALATDC NGRFALLDPYAGAQLALAEAYRNVATGGATPLAISDCLNFGSPEDPAVMWQFAEACRGLKDGCLELGIPVTGGNVSLYNQ TGETAILPTPVVAVLGVIEDVTRRTPSAWSTGGERVFLLGETREELSGSEWAHVVHGHLGGLPPQLDLEAERTLAELLHD AVGLVSSAHDLSDGGLAQALVEGALRHGVGVSVEVPDDAFVGLFSESPGRVVVTVPDGAAERLVELAERHGVELTALGVT GGDALVVEGQFEIPLDELRDAWTTTLPAALG
Sequences:
>Translated_751_residues MLDTVAVAAEDPHHDQPWADLGLKADEYARIREILGRRPTSSELAMYSVMWSEHCSYKSSKVHLKQFSELAEVLAQRQPD AGRLLAGIGENAGVVDIGQGYAVTFKVESHNHPSYVEPYQGAATGVGGIVRDILAMGARPVAVMDPLRFGPLDADDTHRV LPGIVAGVGGYGNCLGLPNIGGEAVFDATYLGNPLVNALCVGVLRHEDLHLAKASGVGNQVILYGARTGGDGIGGVSVLA SETFDADGPAKRPSVQVGDPFMEKLLIECTLEIFAAGLVAGIQDLGGAGLSCATSELASAGDGGMHVELDRVPLRDSTLA PEEILMSESQERMMAVVEPDDVAAFLAICAKWDVEAVVVGEVTDTGRLQIDWHGERVVDVPPRSVAHDGPTYHRPFARPA WQDDLQADAAESLPRPGSGDELRKTLLTLVASPNLCDKSWITDQYDRYVRGNTVLAQPSDSGMVRVDEETDLGVALATDC NGRFALLDPYAGAQLALAEAYRNVATGGATPLAISDCLNFGSPEDPAVMWQFAEACRGLKDGCLELGIPVTGGNVSLYNQ TGETAILPTPVVAVLGVIEDVTRRTPSAWSTGGERVFLLGETREELSGSEWAHVVHGHLGGLPPQLDLEAERTLAELLHD AVGLVSSAHDLSDGGLAQALVEGALRHGVGVSVEVPDDAFVGLFSESPGRVVVTVPDGAAERLVELAERHGVELTALGVT GGDALVVEGQFEIPLDELRDAWTTTLPAALG >Mature_751_residues MLDTVAVAAEDPHHDQPWADLGLKADEYARIREILGRRPTSSELAMYSVMWSEHCSYKSSKVHLKQFSELAEVLAQRQPD AGRLLAGIGENAGVVDIGQGYAVTFKVESHNHPSYVEPYQGAATGVGGIVRDILAMGARPVAVMDPLRFGPLDADDTHRV LPGIVAGVGGYGNCLGLPNIGGEAVFDATYLGNPLVNALCVGVLRHEDLHLAKASGVGNQVILYGARTGGDGIGGVSVLA SETFDADGPAKRPSVQVGDPFMEKLLIECTLEIFAAGLVAGIQDLGGAGLSCATSELASAGDGGMHVELDRVPLRDSTLA PEEILMSESQERMMAVVEPDDVAAFLAICAKWDVEAVVVGEVTDTGRLQIDWHGERVVDVPPRSVAHDGPTYHRPFARPA WQDDLQADAAESLPRPGSGDELRKTLLTLVASPNLCDKSWITDQYDRYVRGNTVLAQPSDSGMVRVDEETDLGVALATDC NGRFALLDPYAGAQLALAEAYRNVATGGATPLAISDCLNFGSPEDPAVMWQFAEACRGLKDGCLELGIPVTGGNVSLYNQ TGETAILPTPVVAVLGVIEDVTRRTPSAWSTGGERVFLLGETREELSGSEWAHVVHGHLGGLPPQLDLEAERTLAELLHD AVGLVSSAHDLSDGGLAQALVEGALRHGVGVSVEVPDDAFVGLFSESPGRVVVTVPDGAAERLVELAERHGVELTALGVT GGDALVVEGQFEIPLDELRDAWTTTLPAALG
Specific function: Unknown
COG id: COG0046
COG function: function code F; Phosphoribosylformylglycinamidine (FGAM) synthase, synthetase domain
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the FGAMS family
Homologues:
Organism=Homo sapiens, GI31657129, Length=731, Percent_Identity=27.906976744186, Blast_Score=110, Evalue=6e-24, Organism=Escherichia coli, GI48994899, Length=775, Percent_Identity=26.1935483870968, Blast_Score=137, Evalue=2e-33, Organism=Saccharomyces cerevisiae, GI6321498, Length=782, Percent_Identity=22.8900255754476, Blast_Score=111, Evalue=5e-25,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): PURL_NOCSJ (A1SPT8)
Other databases:
- EMBL: CP000509 - RefSeq: YP_925510.1 - ProteinModelPortal: A1SPT8 - SMR: A1SPT8 - STRING: A1SPT8 - GeneID: 4596844 - GenomeReviews: CP000509_GR - KEGG: nca:Noca_4326 - eggNOG: COG0046 - HOGENOM: HBG311214 - OMA: YGNSFGV - PhylomeDB: A1SPT8 - ProtClustDB: PRK01213 - BioCyc: NSP35761:NOCA_4326-MONOMER - GO: GO:0005737 - HAMAP: MF_00420 - InterPro: IPR000728 - InterPro: IPR010918 - InterPro: IPR010074 - InterPro: IPR016188 - TIGRFAMs: TIGR01736
Pfam domain/function: PF00586 AIRS; PF02769 AIRS_C; SSF56042 AIR_synth_C; SSF55326 PurM_N-like
EC number: =6.3.5.3
Molecular weight: Translated: 79177; Mature: 79177
Theoretical pI: Translated: 4.28; Mature: 4.28
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLDTVAVAAEDPHHDQPWADLGLKADEYARIREILGRRPTSSELAMYSVMWSEHCSYKSS CCCCEEEECCCCCCCCCHHHCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCC KVHLKQFSELAEVLAQRQPDAGRLLAGIGENAGVVDIGQGYAVTFKVESHNHPSYVEPYQ HHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCEEECCCCEEEEEEEECCCCCCCCCCCC GAATGVGGIVRDILAMGARPVAVMDPLRFGPLDADDTHRVLPGIVAGVGGYGNCLGLPNI CCHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCC GGEAVFDATYLGNPLVNALCVGVLRHEDLHLAKASGVGNQVILYGARTGGDGIGGVSVLA CCCCEEEHHHCCCHHHHHHHHHHHHCCCCEEEECCCCCCEEEEEEECCCCCCCCCHHHEE SETFDADGPAKRPSVQVGDPFMEKLLIECTLEIFAAGLVAGIQDLGGAGLSCATSELASA CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCC GDGGMHVELDRVPLRDSTLAPEEILMSESQERMMAVVEPDDVAAFLAICAKWDVEAVVVG CCCCEEEEEECCCCCCCCCCHHHHHHCCCHHHEEEEECCHHHHHHHHHHHCCCCCEEEEE EVTDTGRLQIDWHGERVVDVPPRSVAHDGPTYHRPFARPAWQDDLQADAAESLPRPGSGD ECCCCCEEEEEECCCEEEECCCHHHCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCHH ELRKTLLTLVASPNLCDKSWITDQYDRYVRGNTVLAQPSDSGMVRVDEETDLGVALATDC HHHHHHHHHHCCCCCCCCCCCCHHHHHHHCCCEEEECCCCCCCEEECCCCCCCEEEEECC NGRFALLDPYAGAQLALAEAYRNVATGGATPLAISDCLNFGSPEDPAVMWQFAEACRGLK CCCEEEECCCCCCHHHHHHHHHHHHCCCCCCEEHHHHHCCCCCCCHHHHHHHHHHHCCHH DGCLELGIPVTGGNVSLYNQTGETAILPTPVVAVLGVIEDVTRRTPSAWSTGGERVFLLG HCHHHCCCEEECCCEEEEECCCCEEECCCHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEE ETREELSGSEWAHVVHGHLGGLPPQLDLEAERTLAELLHDAVGLVSSAHDLSDGGLAQAL CCHHHCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHH VEGALRHGVGVSVEVPDDAFVGLFSESPGRVVVTVPDGAAERLVELAERHGVELTALGVT HHHHHHHCCCCEEECCCCCEEEEECCCCCEEEEECCCCHHHHHHHHHHHCCCEEEEEEEC GGDALVVEGQFEIPLDELRDAWTTTLPAALG CCCEEEEECCCCCCHHHHHHHHHHCCCCCCC >Mature Secondary Structure MLDTVAVAAEDPHHDQPWADLGLKADEYARIREILGRRPTSSELAMYSVMWSEHCSYKSS CCCCEEEECCCCCCCCCHHHCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCC KVHLKQFSELAEVLAQRQPDAGRLLAGIGENAGVVDIGQGYAVTFKVESHNHPSYVEPYQ HHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCEEECCCCEEEEEEEECCCCCCCCCCCC GAATGVGGIVRDILAMGARPVAVMDPLRFGPLDADDTHRVLPGIVAGVGGYGNCLGLPNI CCHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCC GGEAVFDATYLGNPLVNALCVGVLRHEDLHLAKASGVGNQVILYGARTGGDGIGGVSVLA CCCCEEEHHHCCCHHHHHHHHHHHHCCCCEEEECCCCCCEEEEEEECCCCCCCCCHHHEE SETFDADGPAKRPSVQVGDPFMEKLLIECTLEIFAAGLVAGIQDLGGAGLSCATSELASA CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCC GDGGMHVELDRVPLRDSTLAPEEILMSESQERMMAVVEPDDVAAFLAICAKWDVEAVVVG CCCCEEEEEECCCCCCCCCCHHHHHHCCCHHHEEEEECCHHHHHHHHHHHCCCCCEEEEE EVTDTGRLQIDWHGERVVDVPPRSVAHDGPTYHRPFARPAWQDDLQADAAESLPRPGSGD ECCCCCEEEEEECCCEEEECCCHHHCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCHH ELRKTLLTLVASPNLCDKSWITDQYDRYVRGNTVLAQPSDSGMVRVDEETDLGVALATDC HHHHHHHHHHCCCCCCCCCCCCHHHHHHHCCCEEEECCCCCCCEEECCCCCCCEEEEECC NGRFALLDPYAGAQLALAEAYRNVATGGATPLAISDCLNFGSPEDPAVMWQFAEACRGLK CCCEEEECCCCCCHHHHHHHHHHHHCCCCCCEEHHHHHCCCCCCCHHHHHHHHHHHCCHH DGCLELGIPVTGGNVSLYNQTGETAILPTPVVAVLGVIEDVTRRTPSAWSTGGERVFLLG HCHHHCCCEEECCCEEEEECCCCEEECCCHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEE ETREELSGSEWAHVVHGHLGGLPPQLDLEAERTLAELLHDAVGLVSSAHDLSDGGLAQAL CCHHHCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHH VEGALRHGVGVSVEVPDDAFVGLFSESPGRVVVTVPDGAAERLVELAERHGVELTALGVT HHHHHHHCCCCEEECCCCCEEEEECCCCCEEEEECCCCHHHHHHHHHHHCCCEEEEEEEC GGDALVVEGQFEIPLDELRDAWTTTLPAALG CCCEEEEECCCCCCHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA