Definition Nocardioides sp. JS614 chromosome, complete genome.
Accession NC_008699
Length 4,985,871

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The map label for this gene is bar [H]

Identifier: 119718489

GI number: 119718489

Start: 4509471

End: 4510586

Strand: Reverse

Name: bar [H]

Synonym: Noca_4270

Alternate gene names: 119718489

Gene position: 4510586-4509471 (Counterclockwise)

Preceding gene: 119718490

Following gene: 119718488

Centisome position: 90.47

GC content: 70.61

Gene sequence:

>1116_bases
ATGACCCGTCCGATCGAGGTACGCAAGGTCCCGATCGAGCACGTCAGCGACGCGGCCGGCCTGGCCGACCTGATCGACGC
CGGCGTGTTCTCGGCCGACGACGTGATCGCCGTCGTCGGCAAGACCGAGGGCAACGGCGGGGTGAACGACTACACCCGGA
TCATCTCGACCCACGCCTACCGGGCGGTGCTGGAGGAGAAGGGCACCCGCAGCAAGGAGGAGGTCGCCCAGGTCCCGCTC
GTGTGGTCCGGCGGCACCGACGGCGTGATCAGCCCGCACGCGACGATCTTCGCCTACGCGCCGGAGGGCCGGTACCTGCC
GACCGACGAGCCGCGGGTGACCGTCGGCTACGCGATGAGCGAGGTGCTGCTCCCGGAGGACATCGGCCGCCCGGCCATGG
TCGAGAAGGTCGCGGCGGGCGTCCGGGTCGCGATGGAGCGCGCCGGGATCACCGACCCGGCCGACGTGCACTACGTCCAG
ACCAAGACGCCGCTGCTGGTGCAGGACACGATCAACGACGCCGAACGGCGCGGCGAGACCGTCTACACCCACAACACGCT
GGAGTCGATGGACGTCTCCAACGCGACCACGGCCCTGGGCATCGCGGTGGCGCTCGGCGAGATCGAGATGCCCACCGCGG
AGCAGATCTTCCACGACCTCTCCCTCTACTCCTCGGTCGCCTCCTGCTCCTCGGGCGTCGAGCTCGACCAGGCGCAGATC
GTCGTCGTCGGCAACGCCCGCGGCGTGGGCGGCCGGTTCCGCGTCGGCCACAGCATCATGAAGGACGCCCTGGACATGGA
CGGGGTCTGGGCGGCGATCCGGGACGCGGGCCTGGACGACATGCCCGTGGACTGCATCCACCCGCGGCACATCAAGGGCC
GGCTGGTGAACCTGTTCCTCAAGTGCGAGGCCGATCCGACCGGGCGGGTCCGCGGCCGGCGTAACATCATGCTCGACGAC
TCCGACGTCGCCTGGCACCGGCAGATCAAGGCCTGCGTGGGCGGCGTGGTCGCCGCGGTCTCCGGGGACCCGATGAACTT
CGTGTCGGTCGCCGCGGTGCACCAGGGGCCGTCCGGGGGTGGGCCGGTGATCGCGATCGTGGACCTGGAGGCCTGA

Upstream 100 bases:

>100_bases
GCTCCTGCCGCTCGGACCTGCCCGGCACGAACGGGACGGCGCACCCCGCCGTACCCGTCGCGGACACCGGCCCCACCCAC
ACCCCGGAGGTAGCACTGCC

Downstream 100 bases:

>100_bases
CCGCTTCGCCGGCGCGCCGCCGGTCGTCGGGTCGATCGAGATCCTCCAGGACGACGGGTCGCTGCCGCCGGCGTACCGGC
CGCTGCTGGTTTCCGCGACG

Product: barbiturase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 371; Mature: 370

Protein sequence:

>371_residues
MTRPIEVRKVPIEHVSDAAGLADLIDAGVFSADDVIAVVGKTEGNGGVNDYTRIISTHAYRAVLEEKGTRSKEEVAQVPL
VWSGGTDGVISPHATIFAYAPEGRYLPTDEPRVTVGYAMSEVLLPEDIGRPAMVEKVAAGVRVAMERAGITDPADVHYVQ
TKTPLLVQDTINDAERRGETVYTHNTLESMDVSNATTALGIAVALGEIEMPTAEQIFHDLSLYSSVASCSSGVELDQAQI
VVVGNARGVGGRFRVGHSIMKDALDMDGVWAAIRDAGLDDMPVDCIHPRHIKGRLVNLFLKCEADPTGRVRGRRNIMLDD
SDVAWHRQIKACVGGVVAAVSGDPMNFVSVAAVHQGPSGGGPVIAIVDLEA

Sequences:

>Translated_371_residues
MTRPIEVRKVPIEHVSDAAGLADLIDAGVFSADDVIAVVGKTEGNGGVNDYTRIISTHAYRAVLEEKGTRSKEEVAQVPL
VWSGGTDGVISPHATIFAYAPEGRYLPTDEPRVTVGYAMSEVLLPEDIGRPAMVEKVAAGVRVAMERAGITDPADVHYVQ
TKTPLLVQDTINDAERRGETVYTHNTLESMDVSNATTALGIAVALGEIEMPTAEQIFHDLSLYSSVASCSSGVELDQAQI
VVVGNARGVGGRFRVGHSIMKDALDMDGVWAAIRDAGLDDMPVDCIHPRHIKGRLVNLFLKCEADPTGRVRGRRNIMLDD
SDVAWHRQIKACVGGVVAAVSGDPMNFVSVAAVHQGPSGGGPVIAIVDLEA
>Mature_370_residues
TRPIEVRKVPIEHVSDAAGLADLIDAGVFSADDVIAVVGKTEGNGGVNDYTRIISTHAYRAVLEEKGTRSKEEVAQVPLV
WSGGTDGVISPHATIFAYAPEGRYLPTDEPRVTVGYAMSEVLLPEDIGRPAMVEKVAAGVRVAMERAGITDPADVHYVQT
KTPLLVQDTINDAERRGETVYTHNTLESMDVSNATTALGIAVALGEIEMPTAEQIFHDLSLYSSVASCSSGVELDQAQIV
VVGNARGVGGRFRVGHSIMKDALDMDGVWAAIRDAGLDDMPVDCIHPRHIKGRLVNLFLKCEADPTGRVRGRRNIMLDDS
DVAWHRQIKACVGGVVAAVSGDPMNFVSVAAVHQGPSGGGPVIAIVDLEA

Specific function: Cleaves the barbituric acid ring to yield ureidomalonic acid [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014086 [H]

Pfam domain/function: PF09663 Amido_AtzD_TrzD [H]

EC number: =3.5.2.1 [H]

Molecular weight: Translated: 39465; Mature: 39334

Theoretical pI: Translated: 4.78; Mature: 4.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTRPIEVRKVPIEHVSDAAGLADLIDAGVFSADDVIAVVGKTEGNGGVNDYTRIISTHAY
CCCCCEEEECCHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHH
RAVLEEKGTRSKEEVAQVPLVWSGGTDGVISPHATIFAYAPEGRYLPTDEPRVTVGYAMS
HHHHHHCCCCCHHHHHHCCEEECCCCCCCCCCCEEEEEECCCCCCCCCCCCEEEEEHHHH
EVLLPEDIGRPAMVEKVAAGVRVAMERAGITDPADVHYVQTKTPLLVQDTINDAERRGET
HHHCHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCEEEEHHHHHHHHCCCE
VYTHNTLESMDVSNATTALGIAVALGEIEMPTAEQIFHDLSLYSSVASCSSGVELDQAQI
EEEECCHHHCCCCCCHHHHHHEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCEECCEEE
VVVGNARGVGGRFRVGHSIMKDALDMDGVWAAIRDAGLDDMPVDCIHPRHIKGRLVNLFL
EEEECCCCCCCEEHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCCCCCCCCHHCEEEEEEE
KCEADPTGRVRGRRNIMLDDSDVAWHRQIKACVGGVVAAVSGDPMNFVSVAAVHQGPSGG
EECCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHEEEEECCCCCCCEEEEEEECCCCCC
GPVIAIVDLEA
CCEEEEEEECC
>Mature Secondary Structure 
TRPIEVRKVPIEHVSDAAGLADLIDAGVFSADDVIAVVGKTEGNGGVNDYTRIISTHAY
CCCCEEEECCHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHH
RAVLEEKGTRSKEEVAQVPLVWSGGTDGVISPHATIFAYAPEGRYLPTDEPRVTVGYAMS
HHHHHHCCCCCHHHHHHCCEEECCCCCCCCCCCEEEEEECCCCCCCCCCCCEEEEEHHHH
EVLLPEDIGRPAMVEKVAAGVRVAMERAGITDPADVHYVQTKTPLLVQDTINDAERRGET
HHHCHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCEEEEHHHHHHHHCCCE
VYTHNTLESMDVSNATTALGIAVALGEIEMPTAEQIFHDLSLYSSVASCSSGVELDQAQI
EEEECCHHHCCCCCCHHHHHHEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCEECCEEE
VVVGNARGVGGRFRVGHSIMKDALDMDGVWAAIRDAGLDDMPVDCIHPRHIKGRLVNLFL
EEEECCCCCCCEEHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCCCCCCCCHHCEEEEEEE
KCEADPTGRVRGRRNIMLDDSDVAWHRQIKACVGGVVAAVSGDPMNFVSVAAVHQGPSGG
EECCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHEEEEECCCCCCCEEEEEEECCCCCC
GPVIAIVDLEA
CCEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11748240 [H]