| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is lip2 [H]
Identifier: 119718475
GI number: 119718475
Start: 4495266
End: 4496309
Strand: Reverse
Name: lip2 [H]
Synonym: Noca_4256
Alternate gene names: 119718475
Gene position: 4496309-4495266 (Counterclockwise)
Preceding gene: 119718479
Following gene: 119718471
Centisome position: 90.18
GC content: 76.34
Gene sequence:
>1044_bases GTGACCAACGCCCCGCGCTGGACCGAGCGCCTGCAGATCCGTGTCGAGACGCTGGCTCTGCGGGCTGCGATGGGGCTGCC CGAGCGGGTGCAGCGGCTGCTGGGCGGCCGGGCGATCGTCCGCGACGGCCAGACCCTCGCGGCCGATACCCAGCTGATGC TGCGGATGCAGCGGCTGGTGCGCGAGCCCGGCGCCGAGACGCTGCCGATCCCCGAGGGCCGGGCCGCCATCCGGCGGCAC GCCGGCATGACCGGCGGCCGGCAGCGGATCGGCGCCGTCCGCGACCTCACCGTGGCCGACCGCCCGGCCCGGCTCTACAC GCCGACCGGCGCCGCGGCCTCGGGCCCGCTGTTGCTGTTCTTCCACGGCGGCGGCTTCATGTACGGCGACCTGGGCTCCC ACGACGCGTCCTGCCGGTTCCTGGCCGAGCGGTCCGGGGTGCGGGTGCTCGCGGTCGGCTACCGGCTCGGGCCCGAGCGG CCGTTCCCGGCGGCGTACGACGACGCGCTCGCCGCCCACGGCTGGCTCGTCGACCACGCGAGCGAGGTGGGCGCCGACCC CGCCCGGCTCGCCGTCGGCGGCGACTCCGCGGGCGGCAACCTGGCCGCGGTGGTGGCCATCGAGGCGGCCCGCGCCGGGC TGCCGCTGGCGTTCCAGCTGCTCGTCTACCCGGCGACCGACGCGGTCCGCGAGACCGCCAGCGCCGAGCTGTTCGCCGAC GGGTTCTACCTCACCAAGGCGTTCATGGACCTCGCCAACACCTCCTACATCGGCCGCACCGACCCCCGCGACCCGCGGGT CTCGCCGCTGTACGCCGAGCTGCCGGCCGGCCTGGCGCCGGCGTACGTCGCGACCGCCGGTTTCGACCCGCTCCGCGACG AGGGCGAGGCCTACGCCCGCCGGCTCTCCGAGGCCGGGGCCACGGTCGAGCTGCGGCGCTTCACCGACCAGATCCACGGC TTCTTCAACATCGTCGGCGCCGGCCGCACCAGCCGCGCCGCCACCGCCGAGATCGCCGCGAAGCTCAAGTCCGCGCTGCA CTGA
Upstream 100 bases:
>100_bases CGGGACCTCCTCGCCGCGGCTGGAGACGGCGTCCGAGGGCAGGCTCTCCAGGCTCATGCCGGCCAGTCTGGCACTACGGC GTGAACGGTAGGTTGCGTTC
Downstream 100 bases:
>100_bases GCGGGCTGGGGCGCCGGTAGGGGGCCCGCGCCCGTACGCCCGGAAAGCGCGGTGGATCGGATCAGCCCGCTGGTTCATCC GACCCACCGCACTTCTCGCA
Product: alpha/beta hydrolase domain-containing protein
Products: NA
Alternate protein names: Triacylglycerol lipase [H]
Number of amino acids: Translated: 347; Mature: 346
Protein sequence:
>347_residues MTNAPRWTERLQIRVETLALRAAMGLPERVQRLLGGRAIVRDGQTLAADTQLMLRMQRLVREPGAETLPIPEGRAAIRRH AGMTGGRQRIGAVRDLTVADRPARLYTPTGAAASGPLLLFFHGGGFMYGDLGSHDASCRFLAERSGVRVLAVGYRLGPER PFPAAYDDALAAHGWLVDHASEVGADPARLAVGGDSAGGNLAAVVAIEAARAGLPLAFQLLVYPATDAVRETASAELFAD GFYLTKAFMDLANTSYIGRTDPRDPRVSPLYAELPAGLAPAYVATAGFDPLRDEGEAYARRLSEAGATVELRRFTDQIHG FFNIVGAGRTSRAATAEIAAKLKSALH
Sequences:
>Translated_347_residues MTNAPRWTERLQIRVETLALRAAMGLPERVQRLLGGRAIVRDGQTLAADTQLMLRMQRLVREPGAETLPIPEGRAAIRRH AGMTGGRQRIGAVRDLTVADRPARLYTPTGAAASGPLLLFFHGGGFMYGDLGSHDASCRFLAERSGVRVLAVGYRLGPER PFPAAYDDALAAHGWLVDHASEVGADPARLAVGGDSAGGNLAAVVAIEAARAGLPLAFQLLVYPATDAVRETASAELFAD GFYLTKAFMDLANTSYIGRTDPRDPRVSPLYAELPAGLAPAYVATAGFDPLRDEGEAYARRLSEAGATVELRRFTDQIHG FFNIVGAGRTSRAATAEIAAKLKSALH >Mature_346_residues TNAPRWTERLQIRVETLALRAAMGLPERVQRLLGGRAIVRDGQTLAADTQLMLRMQRLVREPGAETLPIPEGRAAIRRHA GMTGGRQRIGAVRDLTVADRPARLYTPTGAAASGPLLLFFHGGGFMYGDLGSHDASCRFLAERSGVRVLAVGYRLGPERP FPAAYDDALAAHGWLVDHASEVGADPARLAVGGDSAGGNLAAVVAIEAARAGLPLAFQLLVYPATDAVRETASAELFADG FYLTKAFMDLANTSYIGRTDPRDPRVSPLYAELPAGLAPAYVATAGFDPLRDEGEAYARRLSEAGATVELRRFTDQIHGF FNIVGAGRTSRAATAEIAAKLKSALH
Specific function: Has An Esterase Activity. Triacetyl Glycerol (Triacetin) Is A Substrate Of The Enzyme. [C]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the 'GDXG' lipolytic enzyme family [H]
Homologues:
Organism=Homo sapiens, GI157041239, Length=313, Percent_Identity=25.2396166134185, Blast_Score=90, Evalue=2e-18, Organism=Homo sapiens, GI61966717, Length=300, Percent_Identity=27, Blast_Score=86, Evalue=6e-17, Organism=Homo sapiens, GI21328446, Length=120, Percent_Identity=36.6666666666667, Blast_Score=85, Evalue=1e-16, Organism=Homo sapiens, GI206597554, Length=141, Percent_Identity=35.4609929078014, Blast_Score=84, Evalue=3e-16, Organism=Homo sapiens, GI68299767, Length=140, Percent_Identity=32.1428571428571, Blast_Score=77, Evalue=3e-14, Organism=Escherichia coli, GI1786682, Length=246, Percent_Identity=28.0487804878049, Blast_Score=86, Evalue=3e-18, Organism=Caenorhabditis elegans, GI17567059, Length=282, Percent_Identity=25.886524822695, Blast_Score=86, Evalue=3e-17, Organism=Caenorhabditis elegans, GI17540028, Length=133, Percent_Identity=37.593984962406, Blast_Score=82, Evalue=3e-16, Organism=Caenorhabditis elegans, GI71996133, Length=131, Percent_Identity=36.6412213740458, Blast_Score=79, Evalue=4e-15, Organism=Caenorhabditis elegans, GI72001146, Length=115, Percent_Identity=35.6521739130435, Blast_Score=72, Evalue=3e-13, Organism=Caenorhabditis elegans, GI115533410, Length=129, Percent_Identity=30.2325581395349, Blast_Score=70, Evalue=2e-12, Organism=Caenorhabditis elegans, GI115533412, Length=129, Percent_Identity=30.2325581395349, Blast_Score=70, Evalue=2e-12, Organism=Drosophila melanogaster, GI24656084, Length=101, Percent_Identity=35.6435643564356, Blast_Score=69, Evalue=4e-12, Organism=Drosophila melanogaster, GI24656076, Length=101, Percent_Identity=35.6435643564356, Blast_Score=69, Evalue=4e-12, Organism=Drosophila melanogaster, GI20130169, Length=101, Percent_Identity=35.6435643564356, Blast_Score=69, Evalue=4e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013094 - InterPro: IPR002168 [H]
Pfam domain/function: PF07859 Abhydrolase_3 [H]
EC number: =3.1.1.3 [H]
Molecular weight: Translated: 37000; Mature: 36868
Theoretical pI: Translated: 9.25; Mature: 9.25
Prosite motif: PS01173 LIPASE_GDXG_HIS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTNAPRWTERLQIRVETLALRAAMGLPERVQRLLGGRAIVRDGQTLAADTQLMLRMQRLV CCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCEEEECCCCHHHHHHHHHHHHHHH REPGAETLPIPEGRAAIRRHAGMTGGRQRIGAVRDLTVADRPARLYTPTGAAASGPLLLF HCCCCCCCCCCCCHHHHHHHCCCCCCHHHHCHHHCCEECCCCCEEECCCCCCCCCCEEEE FHGGGFMYGDLGSHDASCRFLAERSGVRVLAVGYRLGPERPFPAAYDDALAAHGWLVDHA EECCCEEECCCCCCCCCEEEEECCCCCEEEEEEEECCCCCCCCCCHHHHHHHCCHHHHHH SEVGADPARLAVGGDSAGGNLAAVVAIEAARAGLPLAFQLLVYPATDAVRETASAELFAD HHHCCCCCEEEECCCCCCCCEEEEEEEEHHHCCCCEEEEEEEECCHHHHHHHHCHHHHHC GFYLTKAFMDLANTSYIGRTDPRDPRVSPLYAELPAGLAPAYVATAGFDPLRDEGEAYAR HHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHCCCCCCCHHHHHCCCCCCCCHHHHHHH RLSEAGATVELRRFTDQIHGFFNIVGAGRTSRAATAEIAAKLKSALH HHHHCCCEEEHHHHHHHHHHHHHEEECCCCCHHHHHHHHHHHHHHCC >Mature Secondary Structure TNAPRWTERLQIRVETLALRAAMGLPERVQRLLGGRAIVRDGQTLAADTQLMLRMQRLV CCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCEEEECCCCHHHHHHHHHHHHHHH REPGAETLPIPEGRAAIRRHAGMTGGRQRIGAVRDLTVADRPARLYTPTGAAASGPLLLF HCCCCCCCCCCCCHHHHHHHCCCCCCHHHHCHHHCCEECCCCCEEECCCCCCCCCCEEEE FHGGGFMYGDLGSHDASCRFLAERSGVRVLAVGYRLGPERPFPAAYDDALAAHGWLVDHA EECCCEEECCCCCCCCCEEEEECCCCCEEEEEEEECCCCCCCCCCHHHHHHHCCHHHHHH SEVGADPARLAVGGDSAGGNLAAVVAIEAARAGLPLAFQLLVYPATDAVRETASAELFAD HHHCCCCCEEEECCCCCCCCEEEEEEEEHHHCCCCEEEEEEEECCHHHHHHHHCHHHHHC GFYLTKAFMDLANTSYIGRTDPRDPRVSPLYAELPAGLAPAYVATAGFDPLRDEGEAYAR HHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHCCCCCCCHHHHHCCCCCCCCHHHHHHH RLSEAGATVELRRFTDQIHGFFNIVGAGRTSRAATAEIAAKLKSALH HHHHCCCEEEHHHHHHHHHHHHHEEECCCCCHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1907455 [H]