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The map label for this gene is 119718471

Identifier: 119718471

GI number: 119718471

Start: 4490329

End: 4490823

Strand: Reverse

Name: 119718471

Synonym: Noca_4252

Alternate gene names: NA

Gene position: 4490823-4490329 (Counterclockwise)

Preceding gene: 119718475

Following gene: 119718470

Centisome position: 90.07

GC content: 71.11

Gene sequence:

>495_bases
ATGCCGTTCGAGCTCCCCGACAACCTGCACCCCGACTGCGGACCGGTGGCCTGGCTGCTCGGCCGTTGGGGCGGCCGCGG
GCACGGCGACTATCCGACGATCGAGGGCTTCCAGTACGGCCAGGAGCTGGTCTTCACCCACGACGGCCGGCCGTTCTTCC
ACTACTTCGCCCGCGCCTGGATCGTCGACGACGCCGGCGAGAAGGTCCGCGAGGCCGCGCAGGAGGCGGGCTTCCTGCGC
TGCAAGCCCGAGGGCCGGGTCGAGCTGCTGCTCACCCACAACACCGGCTTCGCCGAGGTCTGGTACGGCGAGGCCGCCGA
CGGCAAGCTCGAGCTGACGACCGACGCGGTCGTGCGCACCGAGTCCGCGAAGGAGTACACCGGCGGCAAGCGTCTCTACG
GCAACGTCGAGGGCGACCTGCTGTACGCCTACGACATGGCGGCCATGGGCCAGCCGCTCCAGCCGCACCTGTGGGCGCGG
CTGGTCCGGCAGTGA

Upstream 100 bases:

>100_bases
GCGACCGTGAGGGCCTGGTTGGCGCGCTCCGGGTCGTCGGCTCCGCAGGTGACCTTGACGACGAGTGGGCGTGCCATGTC
GCCCACCCTAGAGTGTCGGT

Downstream 100 bases:

>100_bases
CCCCCGGCGCGTGAGCCCAGGACCACCACGACCATGAGGCAGGAGCAGTGACCGAGGAGCTCGCGGCGCGGCTGCGGGAG
CAGGGCTACCGACTCACCCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 164; Mature: 163

Protein sequence:

>164_residues
MPFELPDNLHPDCGPVAWLLGRWGGRGHGDYPTIEGFQYGQELVFTHDGRPFFHYFARAWIVDDAGEKVREAAQEAGFLR
CKPEGRVELLLTHNTGFAEVWYGEAADGKLELTTDAVVRTESAKEYTGGKRLYGNVEGDLLYAYDMAAMGQPLQPHLWAR
LVRQ

Sequences:

>Translated_164_residues
MPFELPDNLHPDCGPVAWLLGRWGGRGHGDYPTIEGFQYGQELVFTHDGRPFFHYFARAWIVDDAGEKVREAAQEAGFLR
CKPEGRVELLLTHNTGFAEVWYGEAADGKLELTTDAVVRTESAKEYTGGKRLYGNVEGDLLYAYDMAAMGQPLQPHLWAR
LVRQ
>Mature_163_residues
PFELPDNLHPDCGPVAWLLGRWGGRGHGDYPTIEGFQYGQELVFTHDGRPFFHYFARAWIVDDAGEKVREAAQEAGFLRC
KPEGRVELLLTHNTGFAEVWYGEAADGKLELTTDAVVRTESAKEYTGGKRLYGNVEGDLLYAYDMAAMGQPLQPHLWARL
VRQ

Specific function: May play a role in the intracellular transport of hydrophobic ligands (Potential)

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0678 family

Homologues:

Organism=Homo sapiens, GI256818827, Length=158, Percent_Identity=31.0126582278481, Blast_Score=70, Evalue=6e-13,
Organism=Homo sapiens, GI256818825, Length=164, Percent_Identity=32.3170731707317, Blast_Score=67, Evalue=7e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y4252_NOCSJ (A1SPL4)

Other databases:

- EMBL:   CP000509
- RefSeq:   YP_925436.1
- ProteinModelPortal:   A1SPL4
- SMR:   A1SPL4
- STRING:   A1SPL4
- GeneID:   4596766
- GenomeReviews:   CP000509_GR
- KEGG:   nca:Noca_4252
- eggNOG:   NOG05976
- HOGENOM:   HBG445899
- OMA:   VELRPYM
- ProtClustDB:   CLSK764986
- BioCyc:   NSP35761:NOCA_4252-MONOMER
- GO:   GO:0006810
- HAMAP:   MF_01297
- InterPro:   IPR011038
- InterPro:   IPR014878
- InterPro:   IPR022939

Pfam domain/function: PF08768 DUF1794; SSF50814 Calycin

EC number: NA

Molecular weight: Translated: 18473; Mature: 18342

Theoretical pI: Translated: 5.03; Mature: 5.03

Prosite motif: NA

Important sites: BINDING 131-131

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPFELPDNLHPDCGPVAWLLGRWGGRGHGDYPTIEGFQYGQELVFTHDGRPFFHYFARAW
CCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEECCCHHHHHHHHHE
IVDDAGEKVREAAQEAGFLRCKPEGRVELLLTHNTGFAEVWYGEAADGKLELTTDAVVRT
EECCCCHHHHHHHHHCCEEEECCCCCEEEEEECCCCEEEEEECCCCCCEEEEEHHHEEEC
ESAKEYTGGKRLYGNVEGDLLYAYDMAAMGQPLQPHLWARLVRQ
CCCHHHCCCCEEEECCCCCEEEEEEHHHCCCCCCHHHHHHHHCC
>Mature Secondary Structure 
PFELPDNLHPDCGPVAWLLGRWGGRGHGDYPTIEGFQYGQELVFTHDGRPFFHYFARAW
CCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEECCCHHHHHHHHHE
IVDDAGEKVREAAQEAGFLRCKPEGRVELLLTHNTGFAEVWYGEAADGKLELTTDAVVRT
EECCCCHHHHHHHHHCCEEEECCCCCEEEEEECCCCEEEEEECCCCCCEEEEEHHHEEEC
ESAKEYTGGKRLYGNVEGDLLYAYDMAAMGQPLQPHLWARLVRQ
CCCHHHCCCCEEEECCCCCEEEEEEHHHCCCCCCHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA