| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is 119718462
Identifier: 119718462
GI number: 119718462
Start: 4481437
End: 4482297
Strand: Reverse
Name: 119718462
Synonym: Noca_4243
Alternate gene names: NA
Gene position: 4482297-4481437 (Counterclockwise)
Preceding gene: 119718464
Following gene: 119718461
Centisome position: 89.9
GC content: 73.17
Gene sequence:
>861_bases ATGCTCGACCGGCCCGCCCGCCACCTCCGGCTCCGCGCTGCCCTCGTCGAGCTGGTGCTGGTCGCCGCCCTGTTCAACCT GTACCGGTTCGGCCGCGCGGCCATCGACGGCCAGCAGGCCACCGCCCGGCACAACGCCGAGCTGGTCACCGACGCGCAGC GGGCGCTCGGCCTCCCCTCGGAGGCGAGCCTCCAGCGGCTGCTCGACGTCGAGCTCCTGCTGCGGCTGGCCAACACCTAC TACACGTTCGTGCACTTCCCGCTGATGGTGGCGTTCCTCGCGTGGGGGTTCGTGCGGCGCCCGCGCCACGAGTACGTCTG GGCCCGCAACCTGATCGCCGTCCAGACCGGCGCGGCGCTGGTCATCCACATGGCGTTCCCGTTGGCCCCGCCCCGGATGT TCCCGGAGTGGGGCTTCGTCGACACGATGGCCGTCTACGGGCCCTCGGCGTACGACGGGGTGAGCGGCGACGTCGCCAAC CAGTTCGCCGCGATGCCCAGTCTGCACGTCGGCTGGGCGGTCGCCATCGCCTACATCGTGTTCCGCACCGGCCCGCGACC ACTGGCCGTGCTCGCGGCGCTGCACGCGAGCGTCACCTACCTGGTCGTGATCCTCACCGCGAACCACTGGTGGCTCGACG GCGTCGTCGCCATCGCCCTGCTCGCGCTGGCGGCGGCGCTCACCCGGCTGCGCGCCGCCCGAGCCGCCGCACGAGCCGCC GCCCGGGCCGCCGCCCGGGCGAGGATGCGGGGCTCGTTGCCGGGCCCTGCTACAGTTCCCGCAAGTGAGACGACAGTGTC TCAGTTAGTCCGTGAGGGTCCGGTCGGTCCGGGCCGACCGCCGCACCGACGGGAGCCCTGA
Upstream 100 bases:
>100_bases TCCACCGCGCGGCCCGCGCCGGGACCGCACTTGATCAGATGTGCATACATGTGTCTACACTCGTGCCACCCCGCCGCGTG ACCCAGCTCCGGAGGCCCCG
Downstream 100 bases:
>100_bases TGCTGCGAACCCTGGCCACCTTCTCGGTGCGCCACCGCTTCCTGGTCGTGATCGCCTGGCTGATCCTCGTGGCCGGCGTG CTGTTCGCCGGGCAGTCCTA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 286; Mature: 286
Protein sequence:
>286_residues MLDRPARHLRLRAALVELVLVAALFNLYRFGRAAIDGQQATARHNAELVTDAQRALGLPSEASLQRLLDVELLLRLANTY YTFVHFPLMVAFLAWGFVRRPRHEYVWARNLIAVQTGAALVIHMAFPLAPPRMFPEWGFVDTMAVYGPSAYDGVSGDVAN QFAAMPSLHVGWAVAIAYIVFRTGPRPLAVLAALHASVTYLVVILTANHWWLDGVVAIALLALAAALTRLRAARAAARAA ARAAARARMRGSLPGPATVPASETTVSQLVREGPVGPGRPPHRREP
Sequences:
>Translated_286_residues MLDRPARHLRLRAALVELVLVAALFNLYRFGRAAIDGQQATARHNAELVTDAQRALGLPSEASLQRLLDVELLLRLANTY YTFVHFPLMVAFLAWGFVRRPRHEYVWARNLIAVQTGAALVIHMAFPLAPPRMFPEWGFVDTMAVYGPSAYDGVSGDVAN QFAAMPSLHVGWAVAIAYIVFRTGPRPLAVLAALHASVTYLVVILTANHWWLDGVVAIALLALAAALTRLRAARAAARAA ARAAARARMRGSLPGPATVPASETTVSQLVREGPVGPGRPPHRREP >Mature_286_residues MLDRPARHLRLRAALVELVLVAALFNLYRFGRAAIDGQQATARHNAELVTDAQRALGLPSEASLQRLLDVELLLRLANTY YTFVHFPLMVAFLAWGFVRRPRHEYVWARNLIAVQTGAALVIHMAFPLAPPRMFPEWGFVDTMAVYGPSAYDGVSGDVAN QFAAMPSLHVGWAVAIAYIVFRTGPRPLAVLAALHASVTYLVVILTANHWWLDGVVAIALLALAAALTRLRAARAAARAA ARAAARARMRGSLPGPATVPASETTVSQLVREGPVGPGRPPHRREP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31081; Mature: 31081
Theoretical pI: Translated: 11.60; Mature: 11.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLDRPARHLRLRAALVELVLVAALFNLYRFGRAAIDGQQATARHNAELVTDAQRALGLPS CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCHHHHHHHHHHCCCCC EASLQRLLDVELLLRLANTYYTFVHFPLMVAFLAWGFVRRPRHEYVWARNLIAVQTGAAL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCEECCCHHE VIHMAFPLAPPRMFPEWGFVDTMAVYGPSAYDGVSGDVANQFAAMPSLHVGWAVAIAYIV EHHHHCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHH FRTGPRPLAVLAALHASVTYLVVILTANHWWLDGVVAIALLALAAALTRLRAARAAARAA HCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ARAAARARMRGSLPGPATVPASETTVSQLVREGPVGPGRPPHRREP HHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCC >Mature Secondary Structure MLDRPARHLRLRAALVELVLVAALFNLYRFGRAAIDGQQATARHNAELVTDAQRALGLPS CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCHHHHHHHHHHCCCCC EASLQRLLDVELLLRLANTYYTFVHFPLMVAFLAWGFVRRPRHEYVWARNLIAVQTGAAL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCEECCCHHE VIHMAFPLAPPRMFPEWGFVDTMAVYGPSAYDGVSGDVANQFAAMPSLHVGWAVAIAYIV EHHHHCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHH FRTGPRPLAVLAALHASVTYLVVILTANHWWLDGVVAIALLALAAALTRLRAARAAARAA HCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ARAAARARMRGSLPGPATVPASETTVSQLVREGPVGPGRPPHRREP HHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA