Definition Nocardioides sp. JS614 chromosome, complete genome.
Accession NC_008699
Length 4,985,871

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The map label for this gene is 119718443

Identifier: 119718443

GI number: 119718443

Start: 4464696

End: 4466396

Strand: Reverse

Name: 119718443

Synonym: Noca_4224

Alternate gene names: NA

Gene position: 4466396-4464696 (Counterclockwise)

Preceding gene: 119718444

Following gene: 119718442

Centisome position: 89.58

GC content: 65.02

Gene sequence:

>1701_bases
GTGGTCGTGATTGCGGCACTCGCGTACACCGCTTGGTTGGCATGGCAGGTTCAGAGAGACCTCCGGGACGCGGAATCCAG
CGCGTTCGACCTACGAACGTCCTGGACCTCCGGTGACAGCGGATCACGTGACGAGGCCGAAGCCGACTTGGTCGAGAGTG
CCGCCGCGGCGCAGCATCACACCTCCGGACTCTGGTGGCGCGCGCTCGGACACGTTCCGGTTGTCGGTGACGACGCCCGG
GGCGTCGCGGCGATGAGCAGATCGTTGGACGTGATCGCCCAGAATGCTCTGACCCCGCTATGCGACACGGTGGACAAGCT
CGAAGGACTGATCAGGAACGGGCGGATCGACCTCGACGCAGTTGCGGGCCTGGAGCCAGCGGTCGAGCGGGCCTACCGGG
CCCTGACCGTGGCCGACGACGAACTCGCCGGCTTGGACAGTAGCGGGTACGTGGGTGCATTGCGTATAGGCTTCGACCGG
TACGCCGCCCTCGTCGACGGCCTCCGCTCGGGTCTGGCGTCGGCAGACGAGGCCGTCGCCGTGCTTCCGACGATGGCTGG
CGCCGAGGGACCGAAGAACTATCTATTGCTCTTCCAGAACAATGCCGAGATCCGCGCCACTGGTGGCATGCCCGGCTCCT
GGGCGCTGCTGCACGCCGAGGACGGCGAGCTGTCGATGGCTCGCCAGGGCACGGCGGGCGACTTTCCGACCGCGGTCACG
TCAGTACTCCCTCTCACCAGTGAGGAGGAGACGGTCTACGGCGACGAGCTGGGGCTCTACTTCCAAGACCCGGGCTGGAC
ACCGGACTTCCCGCGTGCGGCCGAGTTGTGGCACGCACACTGGGACCAGCGGTTCCCGCGCCTGCCGATCGACGGCGTCG
TCGCCCTTGACCCCGTCGGGATGTCGTATCTGCTCGACGGCACCGGACCAGTGACCGTCGACGACGTTACGTTAACCCGC
GACAACGCCGTAGAGGAACTTCTCAACAAGCCGTACGTCGAGGAACGCCCAGTCGCTCAGAATATGTTCTTCGCGAAGGC
GTCACGCTCAATCTTCGAGGCCGCTACTGGGTCACTCGCGTCGCCGATGGCATTTGTCGAGGGACTTAATCGGGCCGCGG
GGGAAGGCCGACTGCTCGTCGCGTCATTCGATGGCCGAGTAACGAGCGAGCTTGCCGGCACTCCAGTCGAGGGCGCGCTG
GCGGGTGACGACGGGACGACCCCGCACACGGACATCGGCCTCAACGACCTCACAGGCTCCAAGATGTCCTACTACCTGCG
TTATTACGCGGAGGTCGATGCGATCAGTTGCAGAGGCGGGGTGCAGGACCTCGCCGGCACGCTAACGCTCAAGCAGGTCA
TCTCGCCAAATCAGGCGGCTTCGCTTCCTAGCTCCGTGACTGGCGGTGGGAAGTTCGGGATCGATCCAGGGTCCCAGTAC
GTCATGGTTCGCATATATGGCCCTTACAGCGGCACGATCGACCAAGTTCGGCTCAATGGCCGCACCCTCGAGGACGGCTT
GATCCACGAGCTCGGCGACCGGCCGGTCGCGAACGTCGATGTACTGCTGTCATCGCGAAAGGACGTGCTGATCTCCTGGC
GAGGCCGAACTGGACCGGGGCAGACGTCGGGCGGGGAGTTGAGTGTCACTCCGAGCGTCGTGTCGGGGACCGACCGTCGA
CCGTTTGGTACTGCATGTTGA

Upstream 100 bases:

>100_bases
GATCGACTCTAGTGGCTCCGCCGCATCCGCGGCGGGGCCACTGCCCGTTTTCTGACAGGATCGCTTCGTGACCCTACGTC
GCCTGCTGCGGGTCGTCTCG

Downstream 100 bases:

>100_bases
CATGCTTCGCTGGGTTGGGCTCCAGTCGATTCGGAGCCGGCAGTCACGCCTGGTCCAGCCCACTTCATGAACGAGGGCCC
ATGACGAGATGCCTGATGTC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 566; Mature: 566

Protein sequence:

>566_residues
MVVIAALAYTAWLAWQVQRDLRDAESSAFDLRTSWTSGDSGSRDEAEADLVESAAAAQHHTSGLWWRALGHVPVVGDDAR
GVAAMSRSLDVIAQNALTPLCDTVDKLEGLIRNGRIDLDAVAGLEPAVERAYRALTVADDELAGLDSSGYVGALRIGFDR
YAALVDGLRSGLASADEAVAVLPTMAGAEGPKNYLLLFQNNAEIRATGGMPGSWALLHAEDGELSMARQGTAGDFPTAVT
SVLPLTSEEETVYGDELGLYFQDPGWTPDFPRAAELWHAHWDQRFPRLPIDGVVALDPVGMSYLLDGTGPVTVDDVTLTR
DNAVEELLNKPYVEERPVAQNMFFAKASRSIFEAATGSLASPMAFVEGLNRAAGEGRLLVASFDGRVTSELAGTPVEGAL
AGDDGTTPHTDIGLNDLTGSKMSYYLRYYAEVDAISCRGGVQDLAGTLTLKQVISPNQAASLPSSVTGGGKFGIDPGSQY
VMVRIYGPYSGTIDQVRLNGRTLEDGLIHELGDRPVANVDVLLSSRKDVLISWRGRTGPGQTSGGELSVTPSVVSGTDRR
PFGTAC

Sequences:

>Translated_566_residues
MVVIAALAYTAWLAWQVQRDLRDAESSAFDLRTSWTSGDSGSRDEAEADLVESAAAAQHHTSGLWWRALGHVPVVGDDAR
GVAAMSRSLDVIAQNALTPLCDTVDKLEGLIRNGRIDLDAVAGLEPAVERAYRALTVADDELAGLDSSGYVGALRIGFDR
YAALVDGLRSGLASADEAVAVLPTMAGAEGPKNYLLLFQNNAEIRATGGMPGSWALLHAEDGELSMARQGTAGDFPTAVT
SVLPLTSEEETVYGDELGLYFQDPGWTPDFPRAAELWHAHWDQRFPRLPIDGVVALDPVGMSYLLDGTGPVTVDDVTLTR
DNAVEELLNKPYVEERPVAQNMFFAKASRSIFEAATGSLASPMAFVEGLNRAAGEGRLLVASFDGRVTSELAGTPVEGAL
AGDDGTTPHTDIGLNDLTGSKMSYYLRYYAEVDAISCRGGVQDLAGTLTLKQVISPNQAASLPSSVTGGGKFGIDPGSQY
VMVRIYGPYSGTIDQVRLNGRTLEDGLIHELGDRPVANVDVLLSSRKDVLISWRGRTGPGQTSGGELSVTPSVVSGTDRR
PFGTAC
>Mature_566_residues
MVVIAALAYTAWLAWQVQRDLRDAESSAFDLRTSWTSGDSGSRDEAEADLVESAAAAQHHTSGLWWRALGHVPVVGDDAR
GVAAMSRSLDVIAQNALTPLCDTVDKLEGLIRNGRIDLDAVAGLEPAVERAYRALTVADDELAGLDSSGYVGALRIGFDR
YAALVDGLRSGLASADEAVAVLPTMAGAEGPKNYLLLFQNNAEIRATGGMPGSWALLHAEDGELSMARQGTAGDFPTAVT
SVLPLTSEEETVYGDELGLYFQDPGWTPDFPRAAELWHAHWDQRFPRLPIDGVVALDPVGMSYLLDGTGPVTVDDVTLTR
DNAVEELLNKPYVEERPVAQNMFFAKASRSIFEAATGSLASPMAFVEGLNRAAGEGRLLVASFDGRVTSELAGTPVEGAL
AGDDGTTPHTDIGLNDLTGSKMSYYLRYYAEVDAISCRGGVQDLAGTLTLKQVISPNQAASLPSSVTGGGKFGIDPGSQY
VMVRIYGPYSGTIDQVRLNGRTLEDGLIHELGDRPVANVDVLLSSRKDVLISWRGRTGPGQTSGGELSVTPSVVSGTDRR
PFGTAC

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 60050; Mature: 60050

Theoretical pI: Translated: 4.32; Mature: 4.32

Prosite motif: PS00237 G_PROTEIN_RECEP_F1_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVVIAALAYTAWLAWQVQRDLRDAESSAFDLRTSWTSGDSGSRDEAEADLVESAAAAQHH
CEEEEEHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHC
TSGLWWRALGHVPVVGDDARGVAAMSRSLDVIAQNALTPLCDTVDKLEGLIRNGRIDLDA
CCCCHHHHHCCCCEECCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCHH
VAGLEPAVERAYRALTVADDELAGLDSSGYVGALRIGFDRYAALVDGLRSGLASADEAVA
HCCCCHHHHHHHHEEEECCHHHHCCCCCCCEEEEEECHHHHHHHHHHHHHHCCCCCCCEE
VLPTMAGAEGPKNYLLLFQNNAEIRATGGMPGSWALLHAEDGELSMARQGTAGDFPTAVT
EEEHHCCCCCCCCEEEEEECCCEEEECCCCCCCEEEEEECCCCEEEECCCCCCCCHHHHH
SVLPLTSEEETVYGDELGLYFQDPGWTPDFPRAAELWHAHWDQRFPRLPIDGVVALDPVG
HHCCCCCCCCEEECCCEEEEEECCCCCCCCCHHHHHHHHHHHHCCCCCCCCCEEEECCCC
MSYLLDGTGPVTVDDVTLTRDNAVEELLNKPYVEERPVAQNMFFAKASRSIFEAATGSLA
CEEEECCCCCEEEEEEEECCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCC
SPMAFVEGLNRAAGEGRLLVASFDGRVTSELAGTPVEGALAGDDGTTPHTDIGLNDLTGS
CHHHHHHHHHHCCCCCEEEEEECCCCCHHHHCCCCCCCEEECCCCCCCCCCCCCCCCCCC
KMSYYLRYYAEVDAISCRGGVQDLAGTLTLKQVISPNQAASLPSSVTGGGKFGIDPGSQY
HHHHHHHHHHHCCEEECCCCHHHHHHHHHHHHHHCCCHHHCCCCCCCCCCEECCCCCCCE
VMVRIYGPYSGTIDQVRLNGRTLEDGLIHELGDRPVANVDVLLSSRKDVLISWRGRTGPG
EEEEEECCCCCCEEEEEECCEECCCHHHHHHCCCCCCCCEEEECCCCCEEEEECCCCCCC
QTSGGELSVTPSVVSGTDRRPFGTAC
CCCCCEEEECCHHHCCCCCCCCCCCC
>Mature Secondary Structure
MVVIAALAYTAWLAWQVQRDLRDAESSAFDLRTSWTSGDSGSRDEAEADLVESAAAAQHH
CEEEEEHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHC
TSGLWWRALGHVPVVGDDARGVAAMSRSLDVIAQNALTPLCDTVDKLEGLIRNGRIDLDA
CCCCHHHHHCCCCEECCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCHH
VAGLEPAVERAYRALTVADDELAGLDSSGYVGALRIGFDRYAALVDGLRSGLASADEAVA
HCCCCHHHHHHHHEEEECCHHHHCCCCCCCEEEEEECHHHHHHHHHHHHHHCCCCCCCEE
VLPTMAGAEGPKNYLLLFQNNAEIRATGGMPGSWALLHAEDGELSMARQGTAGDFPTAVT
EEEHHCCCCCCCCEEEEEECCCEEEECCCCCCCEEEEEECCCCEEEECCCCCCCCHHHHH
SVLPLTSEEETVYGDELGLYFQDPGWTPDFPRAAELWHAHWDQRFPRLPIDGVVALDPVG
HHCCCCCCCCEEECCCEEEEEECCCCCCCCCHHHHHHHHHHHHCCCCCCCCCEEEECCCC
MSYLLDGTGPVTVDDVTLTRDNAVEELLNKPYVEERPVAQNMFFAKASRSIFEAATGSLA
CEEEECCCCCEEEEEEEECCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCC
SPMAFVEGLNRAAGEGRLLVASFDGRVTSELAGTPVEGALAGDDGTTPHTDIGLNDLTGS
CHHHHHHHHHHCCCCCEEEEEECCCCCHHHHCCCCCCCEEECCCCCCCCCCCCCCCCCCC
KMSYYLRYYAEVDAISCRGGVQDLAGTLTLKQVISPNQAASLPSSVTGGGKFGIDPGSQY
HHHHHHHHHHHCCEEECCCCHHHHHHHHHHHHHHCCCHHHCCCCCCCCCCEECCCCCCCE
VMVRIYGPYSGTIDQVRLNGRTLEDGLIHELGDRPVANVDVLLSSRKDVLISWRGRTGPG
EEEEEECCCCCCEEEEEECCEECCCHHHHHHCCCCCCCCEEEECCCCCEEEEECCCCCCC
QTSGGELSVTPSVVSGTDRRPFGTAC
CCCCCEEEECCHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA