| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is 119718443
Identifier: 119718443
GI number: 119718443
Start: 4464696
End: 4466396
Strand: Reverse
Name: 119718443
Synonym: Noca_4224
Alternate gene names: NA
Gene position: 4466396-4464696 (Counterclockwise)
Preceding gene: 119718444
Following gene: 119718442
Centisome position: 89.58
GC content: 65.02
Gene sequence:
>1701_bases GTGGTCGTGATTGCGGCACTCGCGTACACCGCTTGGTTGGCATGGCAGGTTCAGAGAGACCTCCGGGACGCGGAATCCAG CGCGTTCGACCTACGAACGTCCTGGACCTCCGGTGACAGCGGATCACGTGACGAGGCCGAAGCCGACTTGGTCGAGAGTG CCGCCGCGGCGCAGCATCACACCTCCGGACTCTGGTGGCGCGCGCTCGGACACGTTCCGGTTGTCGGTGACGACGCCCGG GGCGTCGCGGCGATGAGCAGATCGTTGGACGTGATCGCCCAGAATGCTCTGACCCCGCTATGCGACACGGTGGACAAGCT CGAAGGACTGATCAGGAACGGGCGGATCGACCTCGACGCAGTTGCGGGCCTGGAGCCAGCGGTCGAGCGGGCCTACCGGG CCCTGACCGTGGCCGACGACGAACTCGCCGGCTTGGACAGTAGCGGGTACGTGGGTGCATTGCGTATAGGCTTCGACCGG TACGCCGCCCTCGTCGACGGCCTCCGCTCGGGTCTGGCGTCGGCAGACGAGGCCGTCGCCGTGCTTCCGACGATGGCTGG CGCCGAGGGACCGAAGAACTATCTATTGCTCTTCCAGAACAATGCCGAGATCCGCGCCACTGGTGGCATGCCCGGCTCCT GGGCGCTGCTGCACGCCGAGGACGGCGAGCTGTCGATGGCTCGCCAGGGCACGGCGGGCGACTTTCCGACCGCGGTCACG TCAGTACTCCCTCTCACCAGTGAGGAGGAGACGGTCTACGGCGACGAGCTGGGGCTCTACTTCCAAGACCCGGGCTGGAC ACCGGACTTCCCGCGTGCGGCCGAGTTGTGGCACGCACACTGGGACCAGCGGTTCCCGCGCCTGCCGATCGACGGCGTCG TCGCCCTTGACCCCGTCGGGATGTCGTATCTGCTCGACGGCACCGGACCAGTGACCGTCGACGACGTTACGTTAACCCGC GACAACGCCGTAGAGGAACTTCTCAACAAGCCGTACGTCGAGGAACGCCCAGTCGCTCAGAATATGTTCTTCGCGAAGGC GTCACGCTCAATCTTCGAGGCCGCTACTGGGTCACTCGCGTCGCCGATGGCATTTGTCGAGGGACTTAATCGGGCCGCGG GGGAAGGCCGACTGCTCGTCGCGTCATTCGATGGCCGAGTAACGAGCGAGCTTGCCGGCACTCCAGTCGAGGGCGCGCTG GCGGGTGACGACGGGACGACCCCGCACACGGACATCGGCCTCAACGACCTCACAGGCTCCAAGATGTCCTACTACCTGCG TTATTACGCGGAGGTCGATGCGATCAGTTGCAGAGGCGGGGTGCAGGACCTCGCCGGCACGCTAACGCTCAAGCAGGTCA TCTCGCCAAATCAGGCGGCTTCGCTTCCTAGCTCCGTGACTGGCGGTGGGAAGTTCGGGATCGATCCAGGGTCCCAGTAC GTCATGGTTCGCATATATGGCCCTTACAGCGGCACGATCGACCAAGTTCGGCTCAATGGCCGCACCCTCGAGGACGGCTT GATCCACGAGCTCGGCGACCGGCCGGTCGCGAACGTCGATGTACTGCTGTCATCGCGAAAGGACGTGCTGATCTCCTGGC GAGGCCGAACTGGACCGGGGCAGACGTCGGGCGGGGAGTTGAGTGTCACTCCGAGCGTCGTGTCGGGGACCGACCGTCGA CCGTTTGGTACTGCATGTTGA
Upstream 100 bases:
>100_bases GATCGACTCTAGTGGCTCCGCCGCATCCGCGGCGGGGCCACTGCCCGTTTTCTGACAGGATCGCTTCGTGACCCTACGTC GCCTGCTGCGGGTCGTCTCG
Downstream 100 bases:
>100_bases CATGCTTCGCTGGGTTGGGCTCCAGTCGATTCGGAGCCGGCAGTCACGCCTGGTCCAGCCCACTTCATGAACGAGGGCCC ATGACGAGATGCCTGATGTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 566; Mature: 566
Protein sequence:
>566_residues MVVIAALAYTAWLAWQVQRDLRDAESSAFDLRTSWTSGDSGSRDEAEADLVESAAAAQHHTSGLWWRALGHVPVVGDDAR GVAAMSRSLDVIAQNALTPLCDTVDKLEGLIRNGRIDLDAVAGLEPAVERAYRALTVADDELAGLDSSGYVGALRIGFDR YAALVDGLRSGLASADEAVAVLPTMAGAEGPKNYLLLFQNNAEIRATGGMPGSWALLHAEDGELSMARQGTAGDFPTAVT SVLPLTSEEETVYGDELGLYFQDPGWTPDFPRAAELWHAHWDQRFPRLPIDGVVALDPVGMSYLLDGTGPVTVDDVTLTR DNAVEELLNKPYVEERPVAQNMFFAKASRSIFEAATGSLASPMAFVEGLNRAAGEGRLLVASFDGRVTSELAGTPVEGAL AGDDGTTPHTDIGLNDLTGSKMSYYLRYYAEVDAISCRGGVQDLAGTLTLKQVISPNQAASLPSSVTGGGKFGIDPGSQY VMVRIYGPYSGTIDQVRLNGRTLEDGLIHELGDRPVANVDVLLSSRKDVLISWRGRTGPGQTSGGELSVTPSVVSGTDRR PFGTAC
Sequences:
>Translated_566_residues MVVIAALAYTAWLAWQVQRDLRDAESSAFDLRTSWTSGDSGSRDEAEADLVESAAAAQHHTSGLWWRALGHVPVVGDDAR GVAAMSRSLDVIAQNALTPLCDTVDKLEGLIRNGRIDLDAVAGLEPAVERAYRALTVADDELAGLDSSGYVGALRIGFDR YAALVDGLRSGLASADEAVAVLPTMAGAEGPKNYLLLFQNNAEIRATGGMPGSWALLHAEDGELSMARQGTAGDFPTAVT SVLPLTSEEETVYGDELGLYFQDPGWTPDFPRAAELWHAHWDQRFPRLPIDGVVALDPVGMSYLLDGTGPVTVDDVTLTR DNAVEELLNKPYVEERPVAQNMFFAKASRSIFEAATGSLASPMAFVEGLNRAAGEGRLLVASFDGRVTSELAGTPVEGAL AGDDGTTPHTDIGLNDLTGSKMSYYLRYYAEVDAISCRGGVQDLAGTLTLKQVISPNQAASLPSSVTGGGKFGIDPGSQY VMVRIYGPYSGTIDQVRLNGRTLEDGLIHELGDRPVANVDVLLSSRKDVLISWRGRTGPGQTSGGELSVTPSVVSGTDRR PFGTAC >Mature_566_residues MVVIAALAYTAWLAWQVQRDLRDAESSAFDLRTSWTSGDSGSRDEAEADLVESAAAAQHHTSGLWWRALGHVPVVGDDAR GVAAMSRSLDVIAQNALTPLCDTVDKLEGLIRNGRIDLDAVAGLEPAVERAYRALTVADDELAGLDSSGYVGALRIGFDR YAALVDGLRSGLASADEAVAVLPTMAGAEGPKNYLLLFQNNAEIRATGGMPGSWALLHAEDGELSMARQGTAGDFPTAVT SVLPLTSEEETVYGDELGLYFQDPGWTPDFPRAAELWHAHWDQRFPRLPIDGVVALDPVGMSYLLDGTGPVTVDDVTLTR DNAVEELLNKPYVEERPVAQNMFFAKASRSIFEAATGSLASPMAFVEGLNRAAGEGRLLVASFDGRVTSELAGTPVEGAL AGDDGTTPHTDIGLNDLTGSKMSYYLRYYAEVDAISCRGGVQDLAGTLTLKQVISPNQAASLPSSVTGGGKFGIDPGSQY VMVRIYGPYSGTIDQVRLNGRTLEDGLIHELGDRPVANVDVLLSSRKDVLISWRGRTGPGQTSGGELSVTPSVVSGTDRR PFGTAC
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 60050; Mature: 60050
Theoretical pI: Translated: 4.32; Mature: 4.32
Prosite motif: PS00237 G_PROTEIN_RECEP_F1_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVVIAALAYTAWLAWQVQRDLRDAESSAFDLRTSWTSGDSGSRDEAEADLVESAAAAQHH CEEEEEHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHC TSGLWWRALGHVPVVGDDARGVAAMSRSLDVIAQNALTPLCDTVDKLEGLIRNGRIDLDA CCCCHHHHHCCCCEECCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCHH VAGLEPAVERAYRALTVADDELAGLDSSGYVGALRIGFDRYAALVDGLRSGLASADEAVA HCCCCHHHHHHHHEEEECCHHHHCCCCCCCEEEEEECHHHHHHHHHHHHHHCCCCCCCEE VLPTMAGAEGPKNYLLLFQNNAEIRATGGMPGSWALLHAEDGELSMARQGTAGDFPTAVT EEEHHCCCCCCCCEEEEEECCCEEEECCCCCCCEEEEEECCCCEEEECCCCCCCCHHHHH SVLPLTSEEETVYGDELGLYFQDPGWTPDFPRAAELWHAHWDQRFPRLPIDGVVALDPVG HHCCCCCCCCEEECCCEEEEEECCCCCCCCCHHHHHHHHHHHHCCCCCCCCCEEEECCCC MSYLLDGTGPVTVDDVTLTRDNAVEELLNKPYVEERPVAQNMFFAKASRSIFEAATGSLA CEEEECCCCCEEEEEEEECCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCC SPMAFVEGLNRAAGEGRLLVASFDGRVTSELAGTPVEGALAGDDGTTPHTDIGLNDLTGS CHHHHHHHHHHCCCCCEEEEEECCCCCHHHHCCCCCCCEEECCCCCCCCCCCCCCCCCCC KMSYYLRYYAEVDAISCRGGVQDLAGTLTLKQVISPNQAASLPSSVTGGGKFGIDPGSQY HHHHHHHHHHHCCEEECCCCHHHHHHHHHHHHHHCCCHHHCCCCCCCCCCEECCCCCCCE VMVRIYGPYSGTIDQVRLNGRTLEDGLIHELGDRPVANVDVLLSSRKDVLISWRGRTGPG EEEEEECCCCCCEEEEEECCEECCCHHHHHHCCCCCCCCEEEECCCCCEEEEECCCCCCC QTSGGELSVTPSVVSGTDRRPFGTAC CCCCCEEEECCHHHCCCCCCCCCCCC >Mature Secondary Structure MVVIAALAYTAWLAWQVQRDLRDAESSAFDLRTSWTSGDSGSRDEAEADLVESAAAAQHH CEEEEEHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHC TSGLWWRALGHVPVVGDDARGVAAMSRSLDVIAQNALTPLCDTVDKLEGLIRNGRIDLDA CCCCHHHHHCCCCEECCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCHH VAGLEPAVERAYRALTVADDELAGLDSSGYVGALRIGFDRYAALVDGLRSGLASADEAVA HCCCCHHHHHHHHEEEECCHHHHCCCCCCCEEEEEECHHHHHHHHHHHHHHCCCCCCCEE VLPTMAGAEGPKNYLLLFQNNAEIRATGGMPGSWALLHAEDGELSMARQGTAGDFPTAVT EEEHHCCCCCCCCEEEEEECCCEEEECCCCCCCEEEEEECCCCEEEECCCCCCCCHHHHH SVLPLTSEEETVYGDELGLYFQDPGWTPDFPRAAELWHAHWDQRFPRLPIDGVVALDPVG HHCCCCCCCCEEECCCEEEEEECCCCCCCCCHHHHHHHHHHHHCCCCCCCCCEEEECCCC MSYLLDGTGPVTVDDVTLTRDNAVEELLNKPYVEERPVAQNMFFAKASRSIFEAATGSLA CEEEECCCCCEEEEEEEECCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCC SPMAFVEGLNRAAGEGRLLVASFDGRVTSELAGTPVEGALAGDDGTTPHTDIGLNDLTGS CHHHHHHHHHHCCCCCEEEEEECCCCCHHHHCCCCCCCEEECCCCCCCCCCCCCCCCCCC KMSYYLRYYAEVDAISCRGGVQDLAGTLTLKQVISPNQAASLPSSVTGGGKFGIDPGSQY HHHHHHHHHHHCCEEECCCCHHHHHHHHHHHHHHCCCHHHCCCCCCCCCCEECCCCCCCE VMVRIYGPYSGTIDQVRLNGRTLEDGLIHELGDRPVANVDVLLSSRKDVLISWRGRTGPG EEEEEECCCCCCEEEEEECCEECCCHHHHHHCCCCCCCCEEEECCCCCEEEEECCCCCCC QTSGGELSVTPSVVSGTDRRPFGTAC CCCCCEEEECCHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA