| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is 119718444
Identifier: 119718444
GI number: 119718444
Start: 4466500
End: 4466913
Strand: Reverse
Name: 119718444
Synonym: Noca_4225
Alternate gene names: NA
Gene position: 4466913-4466500 (Counterclockwise)
Preceding gene: 119718445
Following gene: 119718443
Centisome position: 89.59
GC content: 63.04
Gene sequence:
>414_bases ATGAAGAAGATGATGGTCAGCCTGTTCTCGGCCGCGCTGATGGGTGCTGGACTCGTCGGAGTCGGCGCCGCTCCTGCTCA GGCAGCGTGCCCGTACACCGGCTGCGTCGAGACCTTCACGCACGTGAATGCGCCGGACACGGTTGTCAGGGGTGACCGCG CGAGGATCTGTGTGAAGGTGACCACTGGCGGTAACGGTCGGCCCAAGGGCCGCGTGACCGTCCTGGTGCACAAGTCGGTG GGCGACTACCACTTCACTGACTCGAAGCGGTACGACGGCGGCCGCGAGTGCTTCACGACAACGAAACTAAACAAGCGTGG CAAGTACGTCGTGAAAGCGAACTTCGACCGCAAGGCCGGTTCGGGCTTCAAGGACTCCGATCAGCGCACGGTCTTCCGTG TCGTCTCGGGCTGA
Upstream 100 bases:
>100_bases GTGACGAATGGCATCATCTCCCCTACGGTGGGTACACAGATCCGCAGCACGGATGTTCCTCAACGATGGCGCCTAGACGC CAGACACGGGAGAAGTCCAG
Downstream 100 bases:
>100_bases CCGGATCGACTCTAGTGGCTCCGCCGCATCCGCGGCGGGGCCACTGCCCGTTTTCTGACAGGATCGCTTCGTGACCCTAC GTCGCCTGCTGCGGGTCGTC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 137; Mature: 137
Protein sequence:
>137_residues MKKMMVSLFSAALMGAGLVGVGAAPAQAACPYTGCVETFTHVNAPDTVVRGDRARICVKVTTGGNGRPKGRVTVLVHKSV GDYHFTDSKRYDGGRECFTTTKLNKRGKYVVKANFDRKAGSGFKDSDQRTVFRVVSG
Sequences:
>Translated_137_residues MKKMMVSLFSAALMGAGLVGVGAAPAQAACPYTGCVETFTHVNAPDTVVRGDRARICVKVTTGGNGRPKGRVTVLVHKSV GDYHFTDSKRYDGGRECFTTTKLNKRGKYVVKANFDRKAGSGFKDSDQRTVFRVVSG >Mature_137_residues MKKMMVSLFSAALMGAGLVGVGAAPAQAACPYTGCVETFTHVNAPDTVVRGDRARICVKVTTGGNGRPKGRVTVLVHKSV GDYHFTDSKRYDGGRECFTTTKLNKRGKYVVKANFDRKAGSGFKDSDQRTVFRVVSG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14695; Mature: 14695
Theoretical pI: Translated: 10.63; Mature: 10.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.9 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 5.8 %Cys+Met (Translated Protein) 2.9 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 5.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKMMVSLFSAALMGAGLVGVGAAPAQAACPYTGCVETFTHVNAPDTVVRGDRARICVKV CHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCCHHHHHHHCCCCCCCEEECCCCEEEEEE TTGGNGRPKGRVTVLVHKSVGDYHFTDSKRYDGGRECFTTTKLNKRGKYVVKANFDRKAG EECCCCCCCCEEEEEEECCCCCEECCCCCCCCCCCEEEEEEEECCCCCEEEEECCCCCCC SGFKDSDQRTVFRVVSG CCCCCCCCEEEEEEECC >Mature Secondary Structure MKKMMVSLFSAALMGAGLVGVGAAPAQAACPYTGCVETFTHVNAPDTVVRGDRARICVKV CHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCCHHHHHHHCCCCCCCEEECCCCEEEEEE TTGGNGRPKGRVTVLVHKSVGDYHFTDSKRYDGGRECFTTTKLNKRGKYVVKANFDRKAG EECCCCCCCCEEEEEEECCCCCEECCCCCCCCCCCEEEEEEEECCCCCEEEEECCCCCCC SGFKDSDQRTVFRVVSG CCCCCCCCEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA