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The map label for this gene is cpsE [H]

Identifier: 119718438

GI number: 119718438

Start: 4460304

End: 4460891

Strand: Reverse

Name: cpsE [H]

Synonym: Noca_4219

Alternate gene names: 119718438

Gene position: 4460891-4460304 (Counterclockwise)

Preceding gene: 119718439

Following gene: 119718437

Centisome position: 89.47

GC content: 57.48

Gene sequence:

>588_bases
ATGGTAGACCTGGCAATCGCCATTAGCGTCGGTGTGGTCTTGACGCCTCTGGGTGTGGCGATCGCAATGGCGATCAAGCT
GAGCGATGGGGGCCCCATCCTGTATGCAGCTCGGCGCGTTGGGCGTGGTGGGCGCACGTTCGCGATGTACAAGTTCCGGA
CGATGGTGGTTGACGCTGAGAAGGTAGGTGGTTCGTCGACGTCGGATCACGACCCGCGCATCACCAAAATCGGTCACCAT
CTGCGCCGCTGGAAATTCGACGAAATCCCGCAACTCATCAATGTATTTCGCGGCGAGATGAGTCTTGTTGGCCCGCGTCC
ACAGGTGGAGTGGGATGTCGAACGTTATACATTGGAGGAACGCCGCCTCCTCTCCGTCAAGCCAGGAGTGACGGATTGGG
CCTCAATTCGGTTCCGGAATGAAGGCAGAATTCTCGCGGCCGAGGAGGACCCAGAAGAGGCATATGACCGTCTGATCCGC
CCTGAAAAGATCGTCCTAGGGCTTGCCTACGTCGATGAGGCATCCATGCGCACAGATATCAAGATCATGATTGCCACTAT
TCGGGCGGTAGTTGGGACCTCGTCATGA

Upstream 100 bases:

>100_bases
TATCGCAGGTCGAATACGTCGCTGAATCGGTTCGACGGTTTTTCGGTCGATGAGAGCGCAGACACACCTACGACGGGCGT
CGTACCGGGTCTCGAAGAGA

Downstream 100 bases:

>100_bases
CACGCACCGCGCCCCTTTCGCGAATTACCGAATCGTGGGATACCGCAGCTGACGATCACCAATGGGAACTGGCGCGCCAG
CGCTATGGCTTGGCGAGTCT

Product: sugar transferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 195; Mature: 195

Protein sequence:

>195_residues
MVDLAIAISVGVVLTPLGVAIAMAIKLSDGGPILYAARRVGRGGRTFAMYKFRTMVVDAEKVGGSSTSDHDPRITKIGHH
LRRWKFDEIPQLINVFRGEMSLVGPRPQVEWDVERYTLEERRLLSVKPGVTDWASIRFRNEGRILAAEEDPEEAYDRLIR
PEKIVLGLAYVDEASMRTDIKIMIATIRAVVGTSS

Sequences:

>Translated_195_residues
MVDLAIAISVGVVLTPLGVAIAMAIKLSDGGPILYAARRVGRGGRTFAMYKFRTMVVDAEKVGGSSTSDHDPRITKIGHH
LRRWKFDEIPQLINVFRGEMSLVGPRPQVEWDVERYTLEERRLLSVKPGVTDWASIRFRNEGRILAAEEDPEEAYDRLIR
PEKIVLGLAYVDEASMRTDIKIMIATIRAVVGTSS
>Mature_195_residues
MVDLAIAISVGVVLTPLGVAIAMAIKLSDGGPILYAARRVGRGGRTFAMYKFRTMVVDAEKVGGSSTSDHDPRITKIGHH
LRRWKFDEIPQLINVFRGEMSLVGPRPQVEWDVERYTLEERRLLSVKPGVTDWASIRFRNEGRILAAEEDPEEAYDRLIR
PEKIVLGLAYVDEASMRTDIKIMIATIRAVVGTSS

Specific function: Galactosyl transferase is essential for the assembly of the group B streptococci (GBS) type III capsular polysaccharide. May be involved in the formation of either or both galactosidic bonds by catalyzing the addition of galactose to an oligosaccharide pr

COG id: COG2148

COG function: function code M; Sugar transferases involved in lipopolysaccharide synthesis

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial sugar transferase family [H]

Homologues:

Organism=Escherichia coli, GI1788360, Length=189, Percent_Identity=38.6243386243386, Blast_Score=117, Evalue=4e-28,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003362
- InterPro:   IPR017475 [H]

Pfam domain/function: PF02397 Bac_transf [H]

EC number: NA

Molecular weight: Translated: 21750; Mature: 21750

Theoretical pI: Translated: 9.39; Mature: 9.39

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVDLAIAISVGVVLTPLGVAIAMAIKLSDGGPILYAARRVGRGGRTFAMYKFRTMVVDAE
CEEEEEEEHHHHHHHHHHHEEEEEEEECCCCCEEEEEHHHCCCCCEEEEEEEEEEEEEHH
KVGGSSTSDHDPRITKIGHHLRRWKFDEIPQLINVFRGEMSLVGPRPQVEWDVERYTLEE
HCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHCCCCEEECCCCCCEECHHHHHHHH
RRLLSVKPGVTDWASIRFRNEGRILAAEEDPEEAYDRLIRPEKIVLGLAYVDEASMRTDI
CEEEEECCCCCCEEEEEECCCCCEEEECCCHHHHHHHHCCCCCEEEEEEECCCCCCCCHH
KIMIATIRAVVGTSS
HHHHHHHHHHHCCCC
>Mature Secondary Structure
MVDLAIAISVGVVLTPLGVAIAMAIKLSDGGPILYAARRVGRGGRTFAMYKFRTMVVDAE
CEEEEEEEHHHHHHHHHHHEEEEEEEECCCCCEEEEEHHHCCCCCEEEEEEEEEEEEEHH
KVGGSSTSDHDPRITKIGHHLRRWKFDEIPQLINVFRGEMSLVGPRPQVEWDVERYTLEE
HCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHCCCCEEECCCCCCEECHHHHHHHH
RRLLSVKPGVTDWASIRFRNEGRILAAEEDPEEAYDRLIRPEKIVLGLAYVDEASMRTDI
CEEEEECCCCCCEEEEEECCCCCEEEECCCHHHHHHHHCCCCCEEEEEEECCCCCCCCHH
KIMIATIRAVVGTSS
HHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8355611; 10913080; 11773119; 12354221 [H]