| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is 119718376
Identifier: 119718376
GI number: 119718376
Start: 4391765
End: 4392664
Strand: Reverse
Name: 119718376
Synonym: Noca_4157
Alternate gene names: NA
Gene position: 4392664-4391765 (Counterclockwise)
Preceding gene: 119718378
Following gene: 119718375
Centisome position: 88.1
GC content: 73.89
Gene sequence:
>900_bases GTGGGATCGCCGACGGTCGCTACTCTCGACGACGTGTCGGCCTGGGGCGAGAGGAACACCCACCACTGGGACGACTGGAC CCTCGGGGACCTGATGGCCGCCAAGCGGGCAGGCCGCACGAGCCACACCGTGAGCCTCGTGGTCCCCGCCCGCAACGAGG CCGCGACCGTCGGCGACGTCGTCACCCGGGTGCGCGAGGCGCTGGTCGACACGGTCGCGCTGCTCGACGAGATCGTCGTC ATCGACTCCGACTCCACCGACGACACCTACGAGGTCGCCACCGACGCCGGCGCCGTCGTGCACCGATCCGCCGAGATCCG CCCCGACCTGGGCAGTGTCCCCGGCAAGGGCGAGGCGATGTGGAAGGCGCAGTTCGTGACCACCGGCGACGTGCTCGTGT TCATGGACGCCGACCTGCTCGACTGGGACACCCACTTCGTGCCCGGCCTGCTCGGCCCGCTGCTCACCCGCCCCGAGGTC GCGCTGGTCAAGGGCTTCTACGAGCGGCCGATGCTCTCCGGCGACGCCGCGGTCCCGTTCGAGGGCGGCCGGGTCACCGA GCTGGTCGCGCGGCCGCTGATCCGGCTGTTGTTCCCCGAGCTCGCGGGCCTGCACCAGCCGCTCGCGGGCGAGTGGGCGG TACGACGCGACCTGTTCGAGCAGCTCAGCGTGCCGACCGGGTACGCCGTGGAGCTCGCCGCCCTCGTCGACACCCTGCGC ACCCGCGGGCTGGACGCGCTCGCCCAGGTCGACCTCGGCACCCGCGCCCACCGGCACCAGTCGCTGCGCGACCTCAGCGG GATGGCCACCCAGATCCTCGCGGCCGCCCTGGCCCGGGTCGGCACCCCCACCGCGGCCGGGCCGGCCGACGAGCGACCGC CGGCGGTGGGCGTGCGATGA
Upstream 100 bases:
>100_bases TCTTCTCGGCTCCGGGGGTCCGGGGCCGGCCACGGCCCCGGCGGATCTCCCCCTGTGGTGTGGACATGGCTGATTGAACA TCACAAAAGGGCCCGCCGGG
Downstream 100 bases:
>100_bases CCCTCAAGCTCGGCCGCCACACCTTCCCCGACACCGCCACGTTGATGATGGCGATCGTCAACCGCACCCCGGACTCGTTC TACGACAAGGGCGCGACCTG
Product: putative glucosyl-3-phosphoglycerate synthase
Products: NA
Alternate protein names: Glycosyl Transferase Family Protein; Glycosyl Transferase; Glycosyl Transferase Family 2 Protein; Glycosyltransferase; Family 2 Glycosyl Transferase; Group 2 Family Glycosyl Transferase; Glycosyltransferase Family Protein; Cell Wall Biosynthesis Glycosyl Transferase; Family 2 Glycosyltransferase; Family 2 Glycosyl Transferase Protein; Dolichyl-Phosphate Mannoosyltransferase Related Protein; Polypeptide N-Acetylgalactosaminyltransferase; Glycosyl Transferase Group 2 Family; Glycosyltransferase Involved In Cell Wall Biogenesis; Cell Wall Biosynthesis Glycosyltransferase; Glycosyl Transferase Group 2 Family Protein
Number of amino acids: Translated: 299; Mature: 298
Protein sequence:
>299_residues MGSPTVATLDDVSAWGERNTHHWDDWTLGDLMAAKRAGRTSHTVSLVVPARNEAATVGDVVTRVREALVDTVALLDEIVV IDSDSTDDTYEVATDAGAVVHRSAEIRPDLGSVPGKGEAMWKAQFVTTGDVLVFMDADLLDWDTHFVPGLLGPLLTRPEV ALVKGFYERPMLSGDAAVPFEGGRVTELVARPLIRLLFPELAGLHQPLAGEWAVRRDLFEQLSVPTGYAVELAALVDTLR TRGLDALAQVDLGTRAHRHQSLRDLSGMATQILAAALARVGTPTAAGPADERPPAVGVR
Sequences:
>Translated_299_residues MGSPTVATLDDVSAWGERNTHHWDDWTLGDLMAAKRAGRTSHTVSLVVPARNEAATVGDVVTRVREALVDTVALLDEIVV IDSDSTDDTYEVATDAGAVVHRSAEIRPDLGSVPGKGEAMWKAQFVTTGDVLVFMDADLLDWDTHFVPGLLGPLLTRPEV ALVKGFYERPMLSGDAAVPFEGGRVTELVARPLIRLLFPELAGLHQPLAGEWAVRRDLFEQLSVPTGYAVELAALVDTLR TRGLDALAQVDLGTRAHRHQSLRDLSGMATQILAAALARVGTPTAAGPADERPPAVGVR >Mature_298_residues GSPTVATLDDVSAWGERNTHHWDDWTLGDLMAAKRAGRTSHTVSLVVPARNEAATVGDVVTRVREALVDTVALLDEIVVI DSDSTDDTYEVATDAGAVVHRSAEIRPDLGSVPGKGEAMWKAQFVTTGDVLVFMDADLLDWDTHFVPGLLGPLLTRPEVA LVKGFYERPMLSGDAAVPFEGGRVTELVARPLIRLLFPELAGLHQPLAGEWAVRRDLFEQLSVPTGYAVELAALVDTLRT RGLDALAQVDLGTRAHRHQSLRDLSGMATQILAAALARVGTPTAAGPADERPPAVGVR
Specific function: Unknown
COG id: COG0463
COG function: function code M; Glycosyltransferases involved in cell wall biogenesis
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32031; Mature: 31899
Theoretical pI: Translated: 4.68; Mature: 4.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGSPTVATLDDVSAWGERNTHHWDDWTLGDLMAAKRAGRTSHTVSLVVPARNEAATVGDV CCCCCEEEHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCCCCEEEEEEECCCCHHHHHHH VTRVREALVDTVALLDEIVVIDSDSTDDTYEVATDAGAVVHRSAEIRPDLGSVPGKGEAM HHHHHHHHHHHHHHHHHEEEEECCCCCCCCHHHHCCCHHHCCCCCCCCCCCCCCCCCCEE WKAQFVTTGDVLVFMDADLLDWDTHFVPGLLGPLLTRPEVALVKGFYERPMLSGDAAVPF EEEEEEEECCEEEEECCCHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCC EGGRVTELVARPLIRLLFPELAGLHQPLAGEWAVRRDLFEQLSVPTGYAVELAALVDTLR CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH TRGLDALAQVDLGTRAHRHQSLRDLSGMATQILAAALARVGTPTAAGPADERPPAVGVR HCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure GSPTVATLDDVSAWGERNTHHWDDWTLGDLMAAKRAGRTSHTVSLVVPARNEAATVGDV CCCCEEEHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCCCCEEEEEEECCCCHHHHHHH VTRVREALVDTVALLDEIVVIDSDSTDDTYEVATDAGAVVHRSAEIRPDLGSVPGKGEAM HHHHHHHHHHHHHHHHHEEEEECCCCCCCCHHHHCCCHHHCCCCCCCCCCCCCCCCCCEE WKAQFVTTGDVLVFMDADLLDWDTHFVPGLLGPLLTRPEVALVKGFYERPMLSGDAAVPF EEEEEEEECCEEEEECCCHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCC EGGRVTELVARPLIRLLFPELAGLHQPLAGEWAVRRDLFEQLSVPTGYAVELAALVDTLR CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH TRGLDALAQVDLGTRAHRHQSLRDLSGMATQILAAALARVGTPTAAGPADERPPAVGVR HCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA