Definition Nocardioides sp. JS614 chromosome, complete genome.
Accession NC_008699
Length 4,985,871

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The map label for this gene is 119718372

Identifier: 119718372

GI number: 119718372

Start: 4387071

End: 4389662

Strand: Reverse

Name: 119718372

Synonym: Noca_4153

Alternate gene names: NA

Gene position: 4389662-4387071 (Counterclockwise)

Preceding gene: 119718373

Following gene: 119718371

Centisome position: 88.04

GC content: 71.6

Gene sequence:

>2592_bases
ATGCCGCGCCCGTTCCGGATCCTCGCCGCTCTCTTCGCCCTGGCCCTGGCCGCAGCGGTGCTGCCCCTGGCCTGGTCGTC
GGCGACCGCCGCGCCGAACGACGCGATCTACCGGCCGCTGAAGGGCTTCGAGCCGACCGGGCCGCGGGTGCGGGTCGATC
CGGACCAGTACGCCGCGGTCCGCGTCGACACCGGCCTGGTGCGCGCGGCGCTGCGTGGCGCCCCGCGGGCCGGCGCGGCC
GGCTCGACCGTCTTCGCGGTCCCGACCCCTGCGGGCGGCACCGAGCGGTTCGCCGTCCAGCGGACCCAGCTGATGCAGGC
CGGGCTGGCCGCCGCCCACCCCGAGATCGCCACCTGGGCCGGCCGGTCGCTCGACCACCCCGGCACCACCATCGCGATGG
ACGTGACCCCGATGGGCTTCCACGCCTCGGTGCGGTCCGGCGGGCAGACGGCGTGGTACGTCGACCCCGCGTACAACCGG
CGCGGCACCACCGAGCACCTCAGCTACTACGGCGGCAGCCTGCCCCAGGAGACCGAGCGGGTCGCCGAGCGGGAGCTGCC
GGACGTGCAGCGGGCGATCGAGCGGCGGGCCACGCAACGCCGGGCCGCGGACGACACCGTCCAGCAGCGGGTCTACCGGC
TCGCGCTGGTCAGCGACCCGACGTACGCGACGTACTTCGGCAGCGCCAACGTGACGGCCGAGAAGGTCACGCTGATGAAC
CGCGTCAACCAGATCTACAACGACGACCTCGCGATCAACATGATCCTGGTCGACGGCACCGACGAGCTCAACCTCGACAC
CGAGGCGAAGGCGTCCGGGCCGAACGGACCGTGCGGCGCGCACCCGTGCTTCGACCCGCCGTCGGGCGACCCGGAGTCGC
CGGACTACGTCCCGGGCCAGCTGGAGTACTGCGACGTCCCGGGCCTGGTTCGCAACCAGGTCGTGCTCGGGCAGATCATC
GGCGCCTCGAACTACGACATCGGGCACCTGATGCTCGGCGTCAACGGCGGCGGCATCGCCGGCCTCGGCGTCGTCGGCAG
CATCGAGAAGGGCCTGGGCTGCACCGGCCTGCCCGACCCGACCGGCGACTTCATGGCGATCGACTACGTCGCCCACGAGA
TGGGTCACCAGTTCGGCGGCAACCACACGTTCAACGGCGTGCAGTACGCCTGCTCGGGCGGCAACCGCAACGCCGGCACC
TCGGTCGAGCCGGGCTCCGGCTCCTCGGTGATGGCCTACGCCGGCATCTGCCTGCAGGACGACCTGCAGCCGCACACCGA
CCCGTACTTCTCCCAGCGCACCCTGGACGAGGTGAACGCCTACACCAGCGGTACGGCGCCCGCGCCGGTCGAGGTGCAGA
ACGTCTCGCTCACCGGCTTCGACACCGACGGCGAGTCGATCATGATCGGCTACCCGGGCGGCGGGGCGCCGGTCACGCTG
ACCCGCGGCTCGACGTACACCGCGGCGAACATCGAGACGGCCGTCGAGGGCCTGACCGGCGAGAACGTCACGGTCACCGG
GTGGGGTTACGACCCGTACGCCGGCGGCTCGACGTACCCCGCGCCGCTGACCGCACCCGACGACACCGGCTTCCAGGTCA
TCTTCGCCGGCGACGCCGACCCGTACACCGCGGACAGCGACCGTGCGGACATGAACGACCTGCAGGTCACCACCTCGTCG
GCGGGCGTGACTGCGTTCGTCGGCGAGACCGCGAAGGGCGGTGAGCCCGGCAACCACGGGTTCGCGATCAACCCGACCGA
CAACCGCAACCCGATCGTGACGGCGCCGGCGAACAAGACCATCCCGACCCGCACGCCGTTCACCCTCACCGGGTCGGGCA
CCGACCCCGACGGCGACCCGCTCGTCTACGTGTGGGAGCAGAACGACGACGCGTCCGGCCACGCCGGCACCGCGCTGGTC
AGCAACACCAAGAAGTGGGGGCCGCTGTTCCGGGTGTTCGGGACGTTCGCGAACGTCACCGACGACGGGACGCTCCAATA
CCACTCGCCGGGGGAGAACGTCGCGACGGCGGCCGGTCGGACGCGCACCTTCCCCGACCTCGCGCAGATCCTGGCCGGCA
ACACCAACGCCGAGACCGGCACCTGCCCACGGGTGCCGCCGCTGCCGGACAACCTCGACGACTACGTCCCGGTGCGGCCG
CGGCCGCGCGACTGCTACTCGGAGTTCCTGCCCACCTCGGCGTACCAGGGTGCGCTGCACTTCCGGCTGACCGCGCGCGA
CCAGATCGTGGGCGGCGGCGGCGTCGGCTCCGACCAGGTCACGCTCCGGGTCGCCAGCAGCGCCGGGCCGTTCCTGGTCA
CCTCGTTCGCCAAGGGCGGCAAGGTCGACGGTGGCAAGAAGAAGGCGATCACCTGGAAGGTCAACGGCACCAAGAAGCTC
GCCAAGAGGATCCGGATCGTGCTGTCCACCGACAACGGCCGGACCTGGGACAACGTGCTCGCCACGACCGCCAACGACGG
CCGGGCCCGGGTCCGCATCCCCAACGTCCGCACCGGCAAGGCGTGGCTGAAGATCGAGGCGGTCGGCAACTACTTCTTCG
ACCTCAGCGACCGCTCCTTCCGGATCCGCTAA

Upstream 100 bases:

>100_bases
AGGGCACGCTGCTCGCCCGCTGGCTCACCGGAGTCCCCGCGGTCCTTTAGGCTGCTGGCACCGCACCTGTTGAGGGGTGC
GGCTCACCGAGGGAGACCCC

Downstream 100 bases:

>100_bases
CTGGGATAGTCCCTGACGATTGTGCGGTCGTTCGCGCCGGAACGGCCCGCAATCGTCAGGGACTATCGCCCCGGCTCTGC
GGTGGCCGGCTCACGGTGGG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 863; Mature: 862

Protein sequence:

>863_residues
MPRPFRILAALFALALAAAVLPLAWSSATAAPNDAIYRPLKGFEPTGPRVRVDPDQYAAVRVDTGLVRAALRGAPRAGAA
GSTVFAVPTPAGGTERFAVQRTQLMQAGLAAAHPEIATWAGRSLDHPGTTIAMDVTPMGFHASVRSGGQTAWYVDPAYNR
RGTTEHLSYYGGSLPQETERVAERELPDVQRAIERRATQRRAADDTVQQRVYRLALVSDPTYATYFGSANVTAEKVTLMN
RVNQIYNDDLAINMILVDGTDELNLDTEAKASGPNGPCGAHPCFDPPSGDPESPDYVPGQLEYCDVPGLVRNQVVLGQII
GASNYDIGHLMLGVNGGGIAGLGVVGSIEKGLGCTGLPDPTGDFMAIDYVAHEMGHQFGGNHTFNGVQYACSGGNRNAGT
SVEPGSGSSVMAYAGICLQDDLQPHTDPYFSQRTLDEVNAYTSGTAPAPVEVQNVSLTGFDTDGESIMIGYPGGGAPVTL
TRGSTYTAANIETAVEGLTGENVTVTGWGYDPYAGGSTYPAPLTAPDDTGFQVIFAGDADPYTADSDRADMNDLQVTTSS
AGVTAFVGETAKGGEPGNHGFAINPTDNRNPIVTAPANKTIPTRTPFTLTGSGTDPDGDPLVYVWEQNDDASGHAGTALV
SNTKKWGPLFRVFGTFANVTDDGTLQYHSPGENVATAAGRTRTFPDLAQILAGNTNAETGTCPRVPPLPDNLDDYVPVRP
RPRDCYSEFLPTSAYQGALHFRLTARDQIVGGGGVGSDQVTLRVASSAGPFLVTSFAKGGKVDGGKKKAITWKVNGTKKL
AKRIRIVLSTDNGRTWDNVLATTANDGRARVRIPNVRTGKAWLKIEAVGNYFFDLSDRSFRIR

Sequences:

>Translated_863_residues
MPRPFRILAALFALALAAAVLPLAWSSATAAPNDAIYRPLKGFEPTGPRVRVDPDQYAAVRVDTGLVRAALRGAPRAGAA
GSTVFAVPTPAGGTERFAVQRTQLMQAGLAAAHPEIATWAGRSLDHPGTTIAMDVTPMGFHASVRSGGQTAWYVDPAYNR
RGTTEHLSYYGGSLPQETERVAERELPDVQRAIERRATQRRAADDTVQQRVYRLALVSDPTYATYFGSANVTAEKVTLMN
RVNQIYNDDLAINMILVDGTDELNLDTEAKASGPNGPCGAHPCFDPPSGDPESPDYVPGQLEYCDVPGLVRNQVVLGQII
GASNYDIGHLMLGVNGGGIAGLGVVGSIEKGLGCTGLPDPTGDFMAIDYVAHEMGHQFGGNHTFNGVQYACSGGNRNAGT
SVEPGSGSSVMAYAGICLQDDLQPHTDPYFSQRTLDEVNAYTSGTAPAPVEVQNVSLTGFDTDGESIMIGYPGGGAPVTL
TRGSTYTAANIETAVEGLTGENVTVTGWGYDPYAGGSTYPAPLTAPDDTGFQVIFAGDADPYTADSDRADMNDLQVTTSS
AGVTAFVGETAKGGEPGNHGFAINPTDNRNPIVTAPANKTIPTRTPFTLTGSGTDPDGDPLVYVWEQNDDASGHAGTALV
SNTKKWGPLFRVFGTFANVTDDGTLQYHSPGENVATAAGRTRTFPDLAQILAGNTNAETGTCPRVPPLPDNLDDYVPVRP
RPRDCYSEFLPTSAYQGALHFRLTARDQIVGGGGVGSDQVTLRVASSAGPFLVTSFAKGGKVDGGKKKAITWKVNGTKKL
AKRIRIVLSTDNGRTWDNVLATTANDGRARVRIPNVRTGKAWLKIEAVGNYFFDLSDRSFRIR
>Mature_862_residues
PRPFRILAALFALALAAAVLPLAWSSATAAPNDAIYRPLKGFEPTGPRVRVDPDQYAAVRVDTGLVRAALRGAPRAGAAG
STVFAVPTPAGGTERFAVQRTQLMQAGLAAAHPEIATWAGRSLDHPGTTIAMDVTPMGFHASVRSGGQTAWYVDPAYNRR
GTTEHLSYYGGSLPQETERVAERELPDVQRAIERRATQRRAADDTVQQRVYRLALVSDPTYATYFGSANVTAEKVTLMNR
VNQIYNDDLAINMILVDGTDELNLDTEAKASGPNGPCGAHPCFDPPSGDPESPDYVPGQLEYCDVPGLVRNQVVLGQIIG
ASNYDIGHLMLGVNGGGIAGLGVVGSIEKGLGCTGLPDPTGDFMAIDYVAHEMGHQFGGNHTFNGVQYACSGGNRNAGTS
VEPGSGSSVMAYAGICLQDDLQPHTDPYFSQRTLDEVNAYTSGTAPAPVEVQNVSLTGFDTDGESIMIGYPGGGAPVTLT
RGSTYTAANIETAVEGLTGENVTVTGWGYDPYAGGSTYPAPLTAPDDTGFQVIFAGDADPYTADSDRADMNDLQVTTSSA
GVTAFVGETAKGGEPGNHGFAINPTDNRNPIVTAPANKTIPTRTPFTLTGSGTDPDGDPLVYVWEQNDDASGHAGTALVS
NTKKWGPLFRVFGTFANVTDDGTLQYHSPGENVATAAGRTRTFPDLAQILAGNTNAETGTCPRVPPLPDNLDDYVPVRPR
PRDCYSEFLPTSAYQGALHFRLTARDQIVGGGGVGSDQVTLRVASSAGPFLVTSFAKGGKVDGGKKKAITWKVNGTKKLA
KRIRIVLSTDNGRTWDNVLATTANDGRARVRIPNVRTGKAWLKIEAVGNYFFDLSDRSFRIR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 91246; Mature: 91115

Theoretical pI: Translated: 5.16; Mature: 5.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPRPFRILAALFALALAAAVLPLAWSSATAAPNDAIYRPLKGFEPTGPRVRVDPDQYAAV
CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHCCCCCCCCCCCEEEECCCCEEEE
RVDTGLVRAALRGAPRAGAAGSTVFAVPTPAGGTERFAVQRTQLMQAGLAAAHPEIATWA
EECHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHC
GRSLDHPGTTIAMDVTPMGFHASVRSGGQTAWYVDPAYNRRGTTEHLSYYGGSLPQETER
CCCCCCCCCEEEEEECCCCEEHHHCCCCCEEEEECCCCCCCCCHHHHHHHCCCCCHHHHH
VAERELPDVQRAIERRATQRRAADDTVQQRVYRLALVSDPTYATYFGSANVTAEKVTLMN
HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCEEEEECCCCCCHHHHHHHH
RVNQIYNDDLAINMILVDGTDELNLDTEAKASGPNGPCGAHPCFDPPSGDPESPDYVPGQ
HHHHHHCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
LEYCDVPGLVRNQVVLGQIIGASNYDIGHLMLGVNGGGIAGLGVVGSIEKGLGCTGLPDP
EEEECCCCHHHCCEEEEEEECCCCCCCEEEEEEECCCCEEEECEEECHHHCCCCCCCCCC
TGDFMAIDYVAHEMGHQFGGNHTFNGVQYACSGGNRNAGTSVEPGSGSSVMAYAGICLQD
CCCEEEHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCEEEEEECEEEEC
DLQPHTDPYFSQRTLDEVNAYTSGTAPAPVEVQNVSLTGFDTDGESIMIGYPGGGAPVTL
CCCCCCCCCCCHHHHHHHHHHCCCCCCCCEEEEEEEEEEECCCCCEEEEEECCCCCCEEE
TRGSTYTAANIETAVEGLTGENVTVTGWGYDPYAGGSTYPAPLTAPDDTGFQVIFAGDAD
ECCCEEEECCHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCC
PYTADSDRADMNDLQVTTSSAGVTAFVGETAKGGEPGNHGFAINPTDNRNPIVTAPANKT
CCCCCCCCCCCCCEEEEECCCCEEEEECCCCCCCCCCCCCEEECCCCCCCCEEECCCCCC
IPTRTPFTLTGSGTDPDGDPLVYVWEQNDDASGHAGTALVSNTKKWGPLFRVFGTFANVT
CCCCCCEEEECCCCCCCCCCEEEEEECCCCCCCCCCEEEECCCCHHHHHHHHHHHHHCCC
DDGTLQYHSPGENVATAAGRTRTFPDLAQILAGNTNAETGTCPRVPPLPDNLDDYVPVRP
CCCEEEECCCCCCHHHCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
RPRDCYSEFLPTSAYQGALHFRLTARDQIVGGGGVGSDQVTLRVASSAGPFLVTSFAKGG
CCHHHHHHHCCCCCCCCEEEEEEEECCEEEECCCCCCCEEEEEEECCCCCEEEEECCCCC
KVDGGKKKAITWKVNGTKKLAKRIRIVLSTDNGRTWDNVLATTANDGRARVRIPNVRTGK
CCCCCCCEEEEEEECCHHHHHCEEEEEEECCCCCCHHHEEEECCCCCEEEEECCCCCCCC
AWLKIEAVGNYFFDLSDRSFRIR
EEEEEEEECCEEEEECCCCEEEC
>Mature Secondary Structure 
PRPFRILAALFALALAAAVLPLAWSSATAAPNDAIYRPLKGFEPTGPRVRVDPDQYAAV
CCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHCCCCCCCCCCCEEEECCCCEEEE
RVDTGLVRAALRGAPRAGAAGSTVFAVPTPAGGTERFAVQRTQLMQAGLAAAHPEIATWA
EECHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHC
GRSLDHPGTTIAMDVTPMGFHASVRSGGQTAWYVDPAYNRRGTTEHLSYYGGSLPQETER
CCCCCCCCCEEEEEECCCCEEHHHCCCCCEEEEECCCCCCCCCHHHHHHHCCCCCHHHHH
VAERELPDVQRAIERRATQRRAADDTVQQRVYRLALVSDPTYATYFGSANVTAEKVTLMN
HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCEEEEECCCCCCHHHHHHHH
RVNQIYNDDLAINMILVDGTDELNLDTEAKASGPNGPCGAHPCFDPPSGDPESPDYVPGQ
HHHHHHCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
LEYCDVPGLVRNQVVLGQIIGASNYDIGHLMLGVNGGGIAGLGVVGSIEKGLGCTGLPDP
EEEECCCCHHHCCEEEEEEECCCCCCCEEEEEEECCCCEEEECEEECHHHCCCCCCCCCC
TGDFMAIDYVAHEMGHQFGGNHTFNGVQYACSGGNRNAGTSVEPGSGSSVMAYAGICLQD
CCCEEEHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCEEEEEECEEEEC
DLQPHTDPYFSQRTLDEVNAYTSGTAPAPVEVQNVSLTGFDTDGESIMIGYPGGGAPVTL
CCCCCCCCCCCHHHHHHHHHHCCCCCCCCEEEEEEEEEEECCCCCEEEEEECCCCCCEEE
TRGSTYTAANIETAVEGLTGENVTVTGWGYDPYAGGSTYPAPLTAPDDTGFQVIFAGDAD
ECCCEEEECCHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCC
PYTADSDRADMNDLQVTTSSAGVTAFVGETAKGGEPGNHGFAINPTDNRNPIVTAPANKT
CCCCCCCCCCCCCEEEEECCCCEEEEECCCCCCCCCCCCCEEECCCCCCCCEEECCCCCC
IPTRTPFTLTGSGTDPDGDPLVYVWEQNDDASGHAGTALVSNTKKWGPLFRVFGTFANVT
CCCCCCEEEECCCCCCCCCCEEEEEECCCCCCCCCCEEEECCCCHHHHHHHHHHHHHCCC
DDGTLQYHSPGENVATAAGRTRTFPDLAQILAGNTNAETGTCPRVPPLPDNLDDYVPVRP
CCCEEEECCCCCCHHHCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
RPRDCYSEFLPTSAYQGALHFRLTARDQIVGGGGVGSDQVTLRVASSAGPFLVTSFAKGG
CCHHHHHHHCCCCCCCCEEEEEEEECCEEEECCCCCCCEEEEEEECCCCCEEEEECCCCC
KVDGGKKKAITWKVNGTKKLAKRIRIVLSTDNGRTWDNVLATTANDGRARVRIPNVRTGK
CCCCCCCEEEEEEECCHHHHHCEEEEEEECCCCCCHHHEEEECCCCCEEEEECCCCCCCC
AWLKIEAVGNYFFDLSDRSFRIR
EEEEEEEECCEEEEECCCCEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA