| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is 119718371
Identifier: 119718371
GI number: 119718371
Start: 4386370
End: 4386975
Strand: Reverse
Name: 119718371
Synonym: Noca_4152
Alternate gene names: NA
Gene position: 4386975-4386370 (Counterclockwise)
Preceding gene: 119718372
Following gene: 119718370
Centisome position: 87.99
GC content: 76.57
Gene sequence:
>606_bases GTGGGGCTCGGGGTCGGCGGGCGCGAGGAGGACTACCGGGCGGCCGGGGCGGAGCTCGGCACCCGGACGATGGCCGAGCT GGCCGGCCGGGTCGCGGTGCTGCGCCGGGTGTGGGCGGGTGAGCGGGTGGTGGACGCCGTACGACCCGTCGGGCCGCCTC CGGTCCGTCCCGGCGGGCCGGAGCTGCTCGTCGGGACGCTGGGACCGCGCACGATCCGCAGCGCCGCGGCGTGGGCCGAC GGCCTCGCCGGGATGTCGCTCGACGTCGACCTCGCGGAGATGGAGCGGGTCTTCGCGCTGACCCGGGACGCGTGGCGCGA GGCGGGGCGGCCGGCGCCGCGCGTGACGACGTCGTTCTGGTGCGCGCTCGACGACGGCGACGGGACCGCGCGCGAGCAGG TGCGCCGGCACCTGCGCCACTACCTGAACTGGATCCCGGTCGAGATCGTCGACGCCATGGCCGCGACCGCGGGCTTCGCG GGTACGCCGGACCAGCTGCGGGAGGTGCTGCGCCGGATCGCGGACCTCGGCGCGGACGAGGTGCAGCTGATCCCGACCGG CTCGGACGTGGACCAGGTGCATCGGATCGCTCACCTGATCGGGTGA
Upstream 100 bases:
>100_bases GCTAACTGGGATAGTCCCTGACGATTGTGCGGTCGTTCGCGCCGGAACGGCCCGCAATCGTCAGGGACTATCGCCCCGGC TCTGCGGTGGCCGGCTCACG
Downstream 100 bases:
>100_bases TTGCCGGGGCCGCTGTGGACGTTCGGGAGCCACCGGGGTCCGCAGGCCCTACCGTGTGCTCGTGCGGATGGACTGGCTGC CGGTCTCGGCGGCGCTGCTG
Product: hypothetical protein
Products: NA
Alternate protein names: MmcJ Protein; Luciferase-Like Protein; Flavin-Dependent Oxidoreductase
Number of amino acids: Translated: 201; Mature: 200
Protein sequence:
>201_residues MGLGVGGREEDYRAAGAELGTRTMAELAGRVAVLRRVWAGERVVDAVRPVGPPPVRPGGPELLVGTLGPRTIRSAAAWAD GLAGMSLDVDLAEMERVFALTRDAWREAGRPAPRVTTSFWCALDDGDGTAREQVRRHLRHYLNWIPVEIVDAMAATAGFA GTPDQLREVLRRIADLGADEVQLIPTGSDVDQVHRIAHLIG
Sequences:
>Translated_201_residues MGLGVGGREEDYRAAGAELGTRTMAELAGRVAVLRRVWAGERVVDAVRPVGPPPVRPGGPELLVGTLGPRTIRSAAAWAD GLAGMSLDVDLAEMERVFALTRDAWREAGRPAPRVTTSFWCALDDGDGTAREQVRRHLRHYLNWIPVEIVDAMAATAGFA GTPDQLREVLRRIADLGADEVQLIPTGSDVDQVHRIAHLIG >Mature_200_residues GLGVGGREEDYRAAGAELGTRTMAELAGRVAVLRRVWAGERVVDAVRPVGPPPVRPGGPELLVGTLGPRTIRSAAAWADG LAGMSLDVDLAEMERVFALTRDAWREAGRPAPRVTTSFWCALDDGDGTAREQVRRHLRHYLNWIPVEIVDAMAATAGFAG TPDQLREVLRRIADLGADEVQLIPTGSDVDQVHRIAHLIG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21658; Mature: 21527
Theoretical pI: Translated: 5.70; Mature: 5.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGLGVGGREEDYRAAGAELGTRTMAELAGRVAVLRRVWAGERVVDAVRPVGPPPVRPGGP CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCCCCCC ELLVGTLGPRTIRSAAAWADGLAGMSLDVDLAEMERVFALTRDAWREAGRPAPRVTTSFW CEEEECCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCEEE CALDDGDGTAREQVRRHLRHYLNWIPVEIVDAMAATAGFAGTPDQLREVLRRIADLGADE EEEECCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCC VQLIPTGSDVDQVHRIAHLIG EEEEECCCCHHHHHHHHHHHC >Mature Secondary Structure GLGVGGREEDYRAAGAELGTRTMAELAGRVAVLRRVWAGERVVDAVRPVGPPPVRPGGP CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCCCCCC ELLVGTLGPRTIRSAAAWADGLAGMSLDVDLAEMERVFALTRDAWREAGRPAPRVTTSFW CEEEECCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCEEE CALDDGDGTAREQVRRHLRHYLNWIPVEIVDAMAATAGFAGTPDQLREVLRRIADLGADE EEEECCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCC VQLIPTGSDVDQVHRIAHLIG EEEEECCCCHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA