| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is 119718295
Identifier: 119718295
GI number: 119718295
Start: 4302335
End: 4304494
Strand: Reverse
Name: 119718295
Synonym: Noca_4076
Alternate gene names: NA
Gene position: 4304494-4302335 (Counterclockwise)
Preceding gene: 119718296
Following gene: 119718294
Centisome position: 86.33
GC content: 70.46
Gene sequence:
>2160_bases GTGGGAGATCGCCGAGGAGGGTCTGTTGACGGCGGCCGAGGCATCCGGCCTGTGGGGACCGGGCGTCGGCGACACCGCCT ACACCGTGCTGACCGCCGCCGGCGCCGACCACGGACGCATCGTCCTGCTCGAGGTCCCCCCGCAGGAGCCGGGCCCGCAC CCGCGGCAGGCGGACACCGGACTGATCGCCATCAACATGTACACCCGAGACATCCAGGTCTCGCACCGGGTGCTCACCGC GGCCGGAACGCCCTGGGCCACGCCTCCGGCGACCTGGGAGGTGCCGCTCGGCGAGAAGCTCGTGACGGTCACCCAGGGAT TCGCGCTGGCTCCCGAGTCGACGGACATCGTGTTCGTCGAGCCCGCACAGGCGCGGGGCACCGCTGCCTGGGACCGAGAC CCGGACCGGCACTACACCGAGCTGACCTCGGTGGTCTGTCACGTCGAGGACTTCCCGGCGGAGGCGGCGTTCTGGGGAGC GGACGGCCTCGGGCTGTCCAGCTGGTACGACGTCACCTTCTCCCACCCCGGCCTGGACAAGATGGCCGCGCTGCCCGAGG GGACAGTCATGCGGCTCACCTTCCTGGCCGGTCCGACGACCGCTCGCATCGAGATCACCCGCATGGAGGACCGCACCCTC GGGACGGACCTGCGGGCGACGCAACGGACGGCACGGCACCTCGGCCACTCGGGTTGGCTGGTCGAGGTCCACGATCTCGG CGCGGCCGTGGCCCGCGCCGCCGAGCGGGGCGGGCGGGTCCTCACGGCCCCCCGGGAAGGCCCCGACGCGCTGTTCGGCG GCCGCCGCGTCTGCTTCATGGACACGCCGAACGGCCTCCCCGTGACCTTCGTCCAGGCCGGTTGAACCGGGCACCCCATC CCTCCATCAAGAGAGAAGAGAACCGCATGCGACCGCACGTCGAGCTGATCCAGGAAGATGACTACGTCTGGCACACGGCT GAGCTGCCGGGTGGTGAGGGCCGCGCGAGCGAGCGCCGGCTCTCCGTGGACGAGGAGGACGGCTCCTCGTCGCTGAAGAT GGCGTTCCACACCGACTGGGGTCGTGGTCCGGGCATCCATCACGCGAACACCGAGTACTACGTGCTCGACGGGGAGATCG ACTACGGCGGCCGGAAGATCGGCACGGGTGGCTACGTCTACGCCCCCAAGGGTGTGCCCGCGGACTACATCAAGATCGCC GAGGGCACCCAGCTGCTGCACTACCGGGAGTACGGCGACGCCGGGTTCGACCAGGTGGAGTCGCTCGCCGGCGCCGCGGC ATGGGACGACGCGAGGGAGGAGATCATCGTGATCGACTCCGAGGCGATGCAGTGGGACGCGGTCCCGAACCCCGGCCCGA TGCCCGGCCTGTTCATCAAGTACCTGCACGTCGACCCGGTCACGGGCTTCTACACCCGGCTGGTGCACGCGCAGGAGGGA TGGGCCGATCACCGGCTGGCGCATCACCCCTGCTACGAGGAGGCCTACACGACCCAGGGCCACATGGAGTACAACTTCGG CACCCTGGACCTGGGCACGTACTTCTTCCGGCCGGCCCGGGTCAAGCACGGCCACTTCACGACCATGGAGGGTGGGGCGA CGTGGTTGCTCCGCTCGGACGGTGAGCTCGCCAACTGGTACACCCAGAACGAGTGGGTGCGGTGGGGAGGCGAGGGCGTC AACTACGGCCCGGACGGGCTCGACGAGTCTCCGCACCCCGCGGCGCGCTGGGCGCACTCGAGTCACGACCTGGCTCAGCC GTGGCGGACCGACGAGGACATGCGTCAGCTGACCAAGTCCTGGCAGTTCCAGAAGGACCAGGGCCAGTTCGACGCGCCAG TGCGTCACCACGGGTCGGGTGCGGACAGGTCGGCCATCGCGATCGCCAAGGCCCTCGACGCGTTCAACCTCCAGGGTGGC CACGGCGGCCACACCCACGACCACACCCACGAGGACGAGCACGTGCACCAGCCCGCGAACCTGGACTGGGGCTGGAGCGG CCGGGACACCGAGCACGCCGACGAGCGCACCGACCAGCACGCGCACAGCTGGGGTGCGGGTCGACAGTGGAAGAAGGGCG ACCCCATCCCGGCCCCCATCCTGTCCAGCCTCCCCGTCCGCAGCCGCTCCCGCGGACGCTGGGACGGCGACGGCATGTGA
Upstream 100 bases:
>100_bases CTCGGATGAGTGACCCGTACCTGGTCGGCGGCGTCAACGCGGCGTTCGTGGGTGTCAACGACCGCAAGCCGCACCTGGAC CTGTACCAGGGGCAGCTCGG
Downstream 100 bases:
>100_bases TCGCCCGGTGCGCGCGGCTCGGGACGCGCGCGACCCACCCACCCCGGCCGCCGGGCGACCGGACACCGACCCCGCACCGT CAGGAGTTCAGCCATCAGCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 719; Mature: 718
Protein sequence:
>719_residues MGDRRGGSVDGGRGIRPVGTGRRRHRLHRADRRRRRPRTHRPARGPPAGAGPAPAAGGHRTDRHQHVHPRHPGLAPGAHR GRNALGHASGDLGGAARREARDGHPGIRAGSRVDGHRVRRARTGAGHRCLGPRPGPALHRADLGGLSRRGLPGGGGVLGS GRPRAVQLVRRHLLPPRPGQDGRAARGDSHAAHLPGRSDDRSHRDHPHGGPHPRDGPAGDATDGTAPRPLGLAGRGPRSR RGRGPRRRAGRAGPHGPPGRPRRAVRRPPRLLHGHAERPPRDLRPGRLNRAPHPSIKREENRMRPHVELIQEDDYVWHTA ELPGGEGRASERRLSVDEEDGSSSLKMAFHTDWGRGPGIHHANTEYYVLDGEIDYGGRKIGTGGYVYAPKGVPADYIKIA EGTQLLHYREYGDAGFDQVESLAGAAAWDDAREEIIVIDSEAMQWDAVPNPGPMPGLFIKYLHVDPVTGFYTRLVHAQEG WADHRLAHHPCYEEAYTTQGHMEYNFGTLDLGTYFFRPARVKHGHFTTMEGGATWLLRSDGELANWYTQNEWVRWGGEGV NYGPDGLDESPHPAARWAHSSHDLAQPWRTDEDMRQLTKSWQFQKDQGQFDAPVRHHGSGADRSAIAIAKALDAFNLQGG HGGHTHDHTHEDEHVHQPANLDWGWSGRDTEHADERTDQHAHSWGAGRQWKKGDPIPAPILSSLPVRSRSRGRWDGDGM
Sequences:
>Translated_719_residues MGDRRGGSVDGGRGIRPVGTGRRRHRLHRADRRRRRPRTHRPARGPPAGAGPAPAAGGHRTDRHQHVHPRHPGLAPGAHR GRNALGHASGDLGGAARREARDGHPGIRAGSRVDGHRVRRARTGAGHRCLGPRPGPALHRADLGGLSRRGLPGGGGVLGS GRPRAVQLVRRHLLPPRPGQDGRAARGDSHAAHLPGRSDDRSHRDHPHGGPHPRDGPAGDATDGTAPRPLGLAGRGPRSR RGRGPRRRAGRAGPHGPPGRPRRAVRRPPRLLHGHAERPPRDLRPGRLNRAPHPSIKREENRMRPHVELIQEDDYVWHTA ELPGGEGRASERRLSVDEEDGSSSLKMAFHTDWGRGPGIHHANTEYYVLDGEIDYGGRKIGTGGYVYAPKGVPADYIKIA EGTQLLHYREYGDAGFDQVESLAGAAAWDDAREEIIVIDSEAMQWDAVPNPGPMPGLFIKYLHVDPVTGFYTRLVHAQEG WADHRLAHHPCYEEAYTTQGHMEYNFGTLDLGTYFFRPARVKHGHFTTMEGGATWLLRSDGELANWYTQNEWVRWGGEGV NYGPDGLDESPHPAARWAHSSHDLAQPWRTDEDMRQLTKSWQFQKDQGQFDAPVRHHGSGADRSAIAIAKALDAFNLQGG HGGHTHDHTHEDEHVHQPANLDWGWSGRDTEHADERTDQHAHSWGAGRQWKKGDPIPAPILSSLPVRSRSRGRWDGDGM >Mature_718_residues GDRRGGSVDGGRGIRPVGTGRRRHRLHRADRRRRRPRTHRPARGPPAGAGPAPAAGGHRTDRHQHVHPRHPGLAPGAHRG RNALGHASGDLGGAARREARDGHPGIRAGSRVDGHRVRRARTGAGHRCLGPRPGPALHRADLGGLSRRGLPGGGGVLGSG RPRAVQLVRRHLLPPRPGQDGRAARGDSHAAHLPGRSDDRSHRDHPHGGPHPRDGPAGDATDGTAPRPLGLAGRGPRSRR GRGPRRRAGRAGPHGPPGRPRRAVRRPPRLLHGHAERPPRDLRPGRLNRAPHPSIKREENRMRPHVELIQEDDYVWHTAE LPGGEGRASERRLSVDEEDGSSSLKMAFHTDWGRGPGIHHANTEYYVLDGEIDYGGRKIGTGGYVYAPKGVPADYIKIAE GTQLLHYREYGDAGFDQVESLAGAAAWDDAREEIIVIDSEAMQWDAVPNPGPMPGLFIKYLHVDPVTGFYTRLVHAQEGW ADHRLAHHPCYEEAYTTQGHMEYNFGTLDLGTYFFRPARVKHGHFTTMEGGATWLLRSDGELANWYTQNEWVRWGGEGVN YGPDGLDESPHPAARWAHSSHDLAQPWRTDEDMRQLTKSWQFQKDQGQFDAPVRHHGSGADRSAIAIAKALDAFNLQGGH GGHTHDHTHEDEHVHQPANLDWGWSGRDTEHADERTDQHAHSWGAGRQWKKGDPIPAPILSSLPVRSRSRGRWDGDGM
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 79133; Mature: 79002
Theoretical pI: Translated: 10.62; Mature: 10.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGDRRGGSVDGGRGIRPVGTGRRRHRLHRADRRRRRPRTHRPARGPPAGAGPAPAAGGHR CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC TDRHQHVHPRHPGLAPGAHRGRNALGHASGDLGGAARREARDGHPGIRAGSRVDGHRVRR CCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCHHHHHH ARTGAGHRCLGPRPGPALHRADLGGLSRRGLPGGGGVLGSGRPRAVQLVRRHLLPPRPGQ HHCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCC DGRAARGDSHAAHLPGRSDDRSHRDHPHGGPHPRDGPAGDATDGTAPRPLGLAGRGPRSR CCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHH RGRGPRRRAGRAGPHGPPGRPRRAVRRPPRLLHGHAERPPRDLRPGRLNRAPHPSIKREE CCCCHHHHCCCCCCCCCCCCCHHHHHCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHH NRMRPHVELIQEDDYVWHTAELPGGEGRASERRLSVDEEDGSSSLKMAFHTDWGRGPGIH HHCCCHHHHEECCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCC HANTEYYVLDGEIDYGGRKIGTGGYVYAPKGVPADYIKIAEGTQLLHYREYGDAGFDQVE CCCCEEEEEECEECCCCEEECCCCEEECCCCCCHHHEEECCCCEEEEEHHCCCCCHHHHH SLAGAAAWDDAREEIIVIDSEAMQWDAVPNPGPMPGLFIKYLHVDPVTGFYTRLVHAQEG HHHHHHHHCCCCCCEEEEECCCEEECCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHCC WADHRLAHHPCYEEAYTTQGHMEYNFGTLDLGTYFFRPARVKHGHFTTMEGGATWLLRSD CHHCCHHCCCCHHHHHCCCCCEEECCCEEEHHHHHCCCCEECCCCEEEECCCEEEEEECC GELANWYTQNEWVRWGGEGVNYGPDGLDESPHPAARWAHSSHDLAQPWRTDEDMRQLTKS CCHHHEEECCCEEEECCCCCCCCCCCCCCCCCHHHHHCCCCCCHHCCCCCCHHHHHHHHH WQFQKDQGQFDAPVRHHGSGADRSAIAIAKALDAFNLQGGHGGHTHDHTHEDEHVHQPAN HCCCCCCCCCCCCHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHCCCCCC LDWGWSGRDTEHADERTDQHAHSWGAGRQWKKGDPIPAPILSSLPVRSRSRGRWDGDGM CCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCC >Mature Secondary Structure GDRRGGSVDGGRGIRPVGTGRRRHRLHRADRRRRRPRTHRPARGPPAGAGPAPAAGGHR CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC TDRHQHVHPRHPGLAPGAHRGRNALGHASGDLGGAARREARDGHPGIRAGSRVDGHRVRR CCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCHHHHHH ARTGAGHRCLGPRPGPALHRADLGGLSRRGLPGGGGVLGSGRPRAVQLVRRHLLPPRPGQ HHCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCC DGRAARGDSHAAHLPGRSDDRSHRDHPHGGPHPRDGPAGDATDGTAPRPLGLAGRGPRSR CCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHH RGRGPRRRAGRAGPHGPPGRPRRAVRRPPRLLHGHAERPPRDLRPGRLNRAPHPSIKREE CCCCHHHHCCCCCCCCCCCCCHHHHHCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHH NRMRPHVELIQEDDYVWHTAELPGGEGRASERRLSVDEEDGSSSLKMAFHTDWGRGPGIH HHCCCHHHHEECCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCC HANTEYYVLDGEIDYGGRKIGTGGYVYAPKGVPADYIKIAEGTQLLHYREYGDAGFDQVE CCCCEEEEEECEECCCCEEECCCCEEECCCCCCHHHEEECCCCEEEEEHHCCCCCHHHHH SLAGAAAWDDAREEIIVIDSEAMQWDAVPNPGPMPGLFIKYLHVDPVTGFYTRLVHAQEG HHHHHHHHCCCCCCEEEEECCCEEECCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHCC WADHRLAHHPCYEEAYTTQGHMEYNFGTLDLGTYFFRPARVKHGHFTTMEGGATWLLRSD CHHCCHHCCCCHHHHHCCCCCEEECCCEEEHHHHHCCCCEECCCCEEEECCCEEEEEECC GELANWYTQNEWVRWGGEGVNYGPDGLDESPHPAARWAHSSHDLAQPWRTDEDMRQLTKS CCHHHEEECCCEEEECCCCCCCCCCCCCCCCCHHHHHCCCCCCHHCCCCCCHHHHHHHHH WQFQKDQGQFDAPVRHHGSGADRSAIAIAKALDAFNLQGGHGGHTHDHTHEDEHVHQPAN HCCCCCCCCCCCCHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHCCCCCC LDWGWSGRDTEHADERTDQHAHSWGAGRQWKKGDPIPAPILSSLPVRSRSRGRWDGDGM CCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA