BacMap

Definition	Nocardioides sp. JS614 chromosome, complete genome.
Accession	NC_008699
Length	4,985,871

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The map label for this gene is gabD2 [H]

Identifier: 119718223

GI number: 119718223

Start: 4225593

End: 4227152

Strand: Reverse

Name: gabD2 [H]

Synonym: Noca_4004

Alternate gene names: 119718223

Gene position: 4227152-4225593 (Counterclockwise)

Preceding gene: 119718224

Following gene: 119718220

Centisome position: 84.78

GC content: 69.74

Gene sequence:

>1560_bases
ATGGCACTCCAGCGACCGGCGTCGATCACCGACGCGTTCCTCGAGCGGCTCGTGGCCCGCGTGCCGTCGACCAGCGGCGG
CACCTGGAAGCTCACCGAGGTCTACACCGGTGACCTGCTCGTGGAGCTCCCGCAGTCGACACCCGCCGACATCGAGGCGG
CGTTCGCGGCGGCGCGCGCGGCCCAGCGCTCGTGGGCGGCCCGACCGCTCAAGGAGCGGCTCGAGGTGTTCAAGCGCGCG
CACGCCCTGTTCCTCGACAACGCCCACACCACGACCGACCTGATCCAGGTCGAGAGCGGCAAGAACCGGCGGATGGCCAT
CGAGGAGACCTGCGACCCGGTGATGGTGATGAGCCACTACCTCAAGCGGGCCCCGCACCTCCTCAAGCCGGTCAAGCGCG
GCGGGCCGATCCCGTTCTTGTCCAGCTCGACCGAGATCCGCCAGCCCAAGGGCGTCGTCGGGATCATCGCGCCGTGGAAC
TTCCCGTTCGCGACCGGCATCTCCGACTCGATCCCGGCGCTGATGGCCGGCAACGCGATCGTGCTCAAGCCGGACAACAA
GACGGCGCTCTCGCCGCTGTACGGCGTGCAGATGCTCGAGGAGGCCGGCCTGCCGAAGGGGCTCTTCCAGGTGGTCTGCG
GCGAGGGCCCGGACGTCGGCCCGACGCTGATCGACAACGCCAACTACGTGATGTTCACCGGCTCGACCGCGACCGGTCGG
GTGATCGGGGAGCGGGCCGGGCGCAACCTAATCGGCTGCTGCCTCGAGCTCGGCGGCAAGAACCCGATGATCGTGCTCGA
GGACGCGGACCTCGACGAGGTCGTGCAGGGCGCGATCTTCGGCGCGTTCGGCAACACCGGCCAGATCTGCATGCACATCG
AGCGGATGTACCTGCCCGCGTCGAGGTACGACGAGTTCCGCTCGCGGTTCGTCGCTGCGACCGAGGCGCTGACCATCGGC
GCGGCGTACGACTTCGGCCCCGACATGGGCTCGCTGGTCTCGCCGGACCACATGGAGCGGGTCCGGGGGCACGTCGACGA
CGCCGTGGCCAAGGGCGCCACCGTGCTCACCGGCGGCCGGTCACGGCCCGACCTCGGCCCGGCCTTCTTCGAGCCGACCA
TCCTGGAGGGCGTCACCCAGGACATGCTCTGCGGCGTCACCGAGACCTTCGGCCCGGTCGTCGCGCTGCACCGGTACGCG
ACCGTCGACGAGGCGATCGCACTCGCGAACGACACCGACTACGGGCTGAACGCCTCGGTGTGGGGCGGCGACATCGCCAG
CGCCTGCCAGGTCGGCCAGCGGATCGAGACGGGCAACGTGAACGTCAACGACATCCTCGCGACGGCGTACGCGTCCAAGG
GCACGCCCTCGGGCGGCGTCAAGCAGTCCGGCGTGGGCGCCCGGCACGGCGACCAGGGCCTGCTGAAGTACACCGACGTG
CAGAACCTCGCCGTCTTGAAGAAGCAGGTGATGGGCGCGCGGCCCGGCCAGGACTACGAGAAGTACGTCAAGGGGATGCT
CAGCGGCCTGCGGATGATGCGCAAGACCGGCATCCGCTAG

Upstream 100 bases:

>100_bases
CGTCGATCACCGGGGGCAACACCAACGCGCCCGCGATCATGATCGGTGAGCGCGGCGCGGACCTCGTTCTCGGCACCGTT
CTCGGAAGGGCGTGAGCACG

Downstream 100 bases:

>100_bases
TGGTTCGGGCGGTCGGGCGCTCGGGCAGTTTCCCCGGTGGGCCGGGGAAACTGCCACTTCCTGGGGGAAGTTTCGGCCCA
ACAGTTACGGTTTCCCCGGT

Product: succinic semialdehyde dehydrogenase

Products: NA

Alternate protein names: SSADH 2; SSDH 2 [H]

Number of amino acids: Translated: 519; Mature: 518

Protein sequence:

>519_residues
MALQRPASITDAFLERLVARVPSTSGGTWKLTEVYTGDLLVELPQSTPADIEAAFAAARAAQRSWAARPLKERLEVFKRA
HALFLDNAHTTTDLIQVESGKNRRMAIEETCDPVMVMSHYLKRAPHLLKPVKRGGPIPFLSSSTEIRQPKGVVGIIAPWN
FPFATGISDSIPALMAGNAIVLKPDNKTALSPLYGVQMLEEAGLPKGLFQVVCGEGPDVGPTLIDNANYVMFTGSTATGR
VIGERAGRNLIGCCLELGGKNPMIVLEDADLDEVVQGAIFGAFGNTGQICMHIERMYLPASRYDEFRSRFVAATEALTIG
AAYDFGPDMGSLVSPDHMERVRGHVDDAVAKGATVLTGGRSRPDLGPAFFEPTILEGVTQDMLCGVTETFGPVVALHRYA
TVDEAIALANDTDYGLNASVWGGDIASACQVGQRIETGNVNVNDILATAYASKGTPSGGVKQSGVGARHGDQGLLKYTDV
QNLAVLKKQVMGARPGQDYEKYVKGMLSGLRMMRKTGIR

Sequences:

>Translated_519_residues
MALQRPASITDAFLERLVARVPSTSGGTWKLTEVYTGDLLVELPQSTPADIEAAFAAARAAQRSWAARPLKERLEVFKRA
HALFLDNAHTTTDLIQVESGKNRRMAIEETCDPVMVMSHYLKRAPHLLKPVKRGGPIPFLSSSTEIRQPKGVVGIIAPWN
FPFATGISDSIPALMAGNAIVLKPDNKTALSPLYGVQMLEEAGLPKGLFQVVCGEGPDVGPTLIDNANYVMFTGSTATGR
VIGERAGRNLIGCCLELGGKNPMIVLEDADLDEVVQGAIFGAFGNTGQICMHIERMYLPASRYDEFRSRFVAATEALTIG
AAYDFGPDMGSLVSPDHMERVRGHVDDAVAKGATVLTGGRSRPDLGPAFFEPTILEGVTQDMLCGVTETFGPVVALHRYA
TVDEAIALANDTDYGLNASVWGGDIASACQVGQRIETGNVNVNDILATAYASKGTPSGGVKQSGVGARHGDQGLLKYTDV
QNLAVLKKQVMGARPGQDYEKYVKGMLSGLRMMRKTGIR
>Mature_518_residues
ALQRPASITDAFLERLVARVPSTSGGTWKLTEVYTGDLLVELPQSTPADIEAAFAAARAAQRSWAARPLKERLEVFKRAH
ALFLDNAHTTTDLIQVESGKNRRMAIEETCDPVMVMSHYLKRAPHLLKPVKRGGPIPFLSSSTEIRQPKGVVGIIAPWNF
PFATGISDSIPALMAGNAIVLKPDNKTALSPLYGVQMLEEAGLPKGLFQVVCGEGPDVGPTLIDNANYVMFTGSTATGRV
IGERAGRNLIGCCLELGGKNPMIVLEDADLDEVVQGAIFGAFGNTGQICMHIERMYLPASRYDEFRSRFVAATEALTIGA
AYDFGPDMGSLVSPDHMERVRGHVDDAVAKGATVLTGGRSRPDLGPAFFEPTILEGVTQDMLCGVTETFGPVVALHRYAT
VDEAIALANDTDYGLNASVWGGDIASACQVGQRIETGNVNVNDILATAYASKGTPSGGVKQSGVGARHGDQGLLKYTDVQ
NLAVLKKQVMGARPGQDYEKYVKGMLSGLRMMRKTGIR

Specific function: Catalyzes the NADP(+)-dependent oxidation of succinate semialdehyde to succinate. Although it has succinate semialdehyde dehydrogenase activity, is likely to act physiologically on a different aldehyde(s) [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the aldehyde dehydrogenase family [H]

Homologues:

Organism=Homo sapiens, GI12007648, Length=460, Percent_Identity=31.5217391304348, Blast_Score=236, Evalue=3e-62,
Organism=Homo sapiens, GI25777724, Length=472, Percent_Identity=33.2627118644068, Blast_Score=221, Evalue=1e-57,
Organism=Homo sapiens, GI25777732, Length=458, Percent_Identity=32.9694323144105, Blast_Score=219, Evalue=5e-57,
Organism=Homo sapiens, GI25777730, Length=470, Percent_Identity=32.3404255319149, Blast_Score=218, Evalue=1e-56,
Organism=Homo sapiens, GI153266822, Length=481, Percent_Identity=31.6008316008316, Blast_Score=218, Evalue=2e-56,
Organism=Homo sapiens, GI25777728, Length=342, Percent_Identity=38.0116959064327, Blast_Score=217, Evalue=2e-56,
Organism=Homo sapiens, GI4507229, Length=428, Percent_Identity=34.1121495327103, Blast_Score=215, Evalue=7e-56,
Organism=Homo sapiens, GI21361176, Length=346, Percent_Identity=36.4161849710983, Blast_Score=209, Evalue=4e-54,
Organism=Homo sapiens, GI25777721, Length=441, Percent_Identity=33.1065759637188, Blast_Score=206, Evalue=6e-53,
Organism=Homo sapiens, GI115387104, Length=480, Percent_Identity=31.25, Blast_Score=205, Evalue=7e-53,
Organism=Homo sapiens, GI238814322, Length=433, Percent_Identity=30.2540415704388, Blast_Score=196, Evalue=4e-50,
Organism=Homo sapiens, GI21614513, Length=342, Percent_Identity=35.0877192982456, Blast_Score=196, Evalue=6e-50,
Organism=Homo sapiens, GI25777726, Length=470, Percent_Identity=30.6382978723404, Blast_Score=182, Evalue=5e-46,
Organism=Homo sapiens, GI188035924, Length=458, Percent_Identity=30.3493449781659, Blast_Score=171, Evalue=2e-42,
Organism=Homo sapiens, GI310128103, Length=453, Percent_Identity=30.6843267108168, Blast_Score=171, Evalue=2e-42,
Organism=Homo sapiens, GI310128093, Length=453, Percent_Identity=30.4635761589404, Blast_Score=169, Evalue=5e-42,
Organism=Homo sapiens, GI25952152, Length=454, Percent_Identity=27.5330396475771, Blast_Score=168, Evalue=1e-41,
Organism=Homo sapiens, GI301500698, Length=284, Percent_Identity=33.0985915492958, Blast_Score=164, Evalue=1e-40,
Organism=Homo sapiens, GI11095441, Length=462, Percent_Identity=26.1904761904762, Blast_Score=161, Evalue=1e-39,
Organism=Homo sapiens, GI310128091, Length=447, Percent_Identity=29.9776286353468, Blast_Score=154, Evalue=2e-37,
Organism=Homo sapiens, GI25777736, Length=477, Percent_Identity=27.0440251572327, Blast_Score=143, Evalue=4e-34,
Organism=Homo sapiens, GI25777734, Length=477, Percent_Identity=27.0440251572327, Blast_Score=143, Evalue=4e-34,
Organism=Homo sapiens, GI238859541, Length=477, Percent_Identity=27.0440251572327, Blast_Score=142, Evalue=6e-34,
Organism=Homo sapiens, GI4557303, Length=427, Percent_Identity=26.2295081967213, Blast_Score=142, Evalue=1e-33,
Organism=Homo sapiens, GI73466520, Length=427, Percent_Identity=26.2295081967213, Blast_Score=141, Evalue=1e-33,
Organism=Homo sapiens, GI206597441, Length=444, Percent_Identity=26.3513513513513, Blast_Score=140, Evalue=3e-33,
Organism=Homo sapiens, GI206597439, Length=444, Percent_Identity=26.3513513513513, Blast_Score=140, Evalue=3e-33,
Organism=Homo sapiens, GI22907049, Length=444, Percent_Identity=26.3513513513513, Blast_Score=140, Evalue=3e-33,
Organism=Homo sapiens, GI310128089, Length=291, Percent_Identity=33.3333333333333, Blast_Score=136, Evalue=4e-32,
Organism=Homo sapiens, GI310128097, Length=261, Percent_Identity=33.7164750957854, Blast_Score=124, Evalue=3e-28,
Organism=Homo sapiens, GI73695881, Length=328, Percent_Identity=28.9634146341463, Blast_Score=120, Evalue=2e-27,
Organism=Homo sapiens, GI73695879, Length=328, Percent_Identity=28.9634146341463, Blast_Score=120, Evalue=2e-27,
Organism=Homo sapiens, GI4502043, Length=340, Percent_Identity=29.4117647058824, Blast_Score=119, Evalue=8e-27,
Organism=Homo sapiens, GI238814371, Length=340, Percent_Identity=29.4117647058824, Blast_Score=119, Evalue=8e-27,
Organism=Homo sapiens, GI71773324, Length=340, Percent_Identity=29.4117647058824, Blast_Score=119, Evalue=9e-27,
Organism=Homo sapiens, GI310128095, Length=318, Percent_Identity=29.874213836478, Blast_Score=114, Evalue=2e-25,
Organism=Homo sapiens, GI223972651, Length=454, Percent_Identity=27.9735682819383, Blast_Score=110, Evalue=3e-24,
Organism=Homo sapiens, GI310128087, Length=270, Percent_Identity=31.8518518518519, Blast_Score=106, Evalue=6e-23,
Organism=Homo sapiens, GI223972653, Length=448, Percent_Identity=23.8839285714286, Blast_Score=72, Evalue=2e-12,
Organism=Homo sapiens, GI310128099, Length=211, Percent_Identity=27.9620853080569, Blast_Score=67, Evalue=5e-11,
Organism=Homo sapiens, GI310128101, Length=211, Percent_Identity=27.9620853080569, Blast_Score=67, Evalue=6e-11,
Organism=Escherichia coli, GI1789015, Length=469, Percent_Identity=33.2622601279318, Blast_Score=240, Evalue=2e-64,
Organism=Escherichia coli, GI87081896, Length=465, Percent_Identity=34.1935483870968, Blast_Score=228, Evalue=9e-61,
Organism=Escherichia coli, GI1787684, Length=452, Percent_Identity=32.7433628318584, Blast_Score=221, Evalue=9e-59,
Organism=Escherichia coli, GI1786504, Length=471, Percent_Identity=32.484076433121, Blast_Score=211, Evalue=1e-55,
Organism=Escherichia coli, GI87082295, Length=501, Percent_Identity=34.3313373253493, Blast_Score=206, Evalue=4e-54,
Organism=Escherichia coli, GI1787715, Length=455, Percent_Identity=32.967032967033, Blast_Score=199, Evalue=3e-52,
Organism=Escherichia coli, GI87081926, Length=450, Percent_Identity=31.1111111111111, Blast_Score=191, Evalue=8e-50,
Organism=Escherichia coli, GI1787558, Length=455, Percent_Identity=30.5494505494506, Blast_Score=186, Evalue=3e-48,
Organism=Escherichia coli, GI1788042, Length=438, Percent_Identity=32.1917808219178, Blast_Score=160, Evalue=3e-40,
Organism=Escherichia coli, GI1787250, Length=448, Percent_Identity=27.9017857142857, Blast_Score=136, Evalue=4e-33,
Organism=Escherichia coli, GI1787653, Length=271, Percent_Identity=27.6752767527675, Blast_Score=85, Evalue=1e-17,
Organism=Caenorhabditis elegans, GI25143876, Length=465, Percent_Identity=31.8279569892473, Blast_Score=211, Evalue=7e-55,
Organism=Caenorhabditis elegans, GI25143874, Length=465, Percent_Identity=32.0430107526882, Blast_Score=211, Evalue=9e-55,
Organism=Caenorhabditis elegans, GI17562198, Length=473, Percent_Identity=31.5010570824524, Blast_Score=211, Evalue=9e-55,
Organism=Caenorhabditis elegans, GI25144435, Length=476, Percent_Identity=31.3025210084034, Blast_Score=204, Evalue=6e-53,
Organism=Caenorhabditis elegans, GI133930964, Length=476, Percent_Identity=29.4117647058824, Blast_Score=196, Evalue=2e-50,
Organism=Caenorhabditis elegans, GI32564736, Length=344, Percent_Identity=35.7558139534884, Blast_Score=196, Evalue=3e-50,
Organism=Caenorhabditis elegans, GI71995606, Length=482, Percent_Identity=30.2904564315353, Blast_Score=194, Evalue=1e-49,
Organism=Caenorhabditis elegans, GI17534119, Length=465, Percent_Identity=29.4623655913978, Blast_Score=190, Evalue=1e-48,
Organism=Caenorhabditis elegans, GI17551164, Length=489, Percent_Identity=27.4028629856851, Blast_Score=179, Evalue=3e-45,
Organism=Caenorhabditis elegans, GI71995613, Length=420, Percent_Identity=30.7142857142857, Blast_Score=176, Evalue=3e-44,
Organism=Caenorhabditis elegans, GI115534176, Length=444, Percent_Identity=30.8558558558559, Blast_Score=175, Evalue=4e-44,
Organism=Caenorhabditis elegans, GI17534447, Length=455, Percent_Identity=29.2307692307692, Blast_Score=141, Evalue=1e-33,
Organism=Caenorhabditis elegans, GI71986308, Length=422, Percent_Identity=26.5402843601896, Blast_Score=139, Evalue=3e-33,
Organism=Caenorhabditis elegans, GI32564151, Length=407, Percent_Identity=29.7297297297297, Blast_Score=137, Evalue=2e-32,
Organism=Caenorhabditis elegans, GI25146391, Length=439, Percent_Identity=25.5125284738041, Blast_Score=134, Evalue=8e-32,
Organism=Caenorhabditis elegans, GI32566756, Length=439, Percent_Identity=25.5125284738041, Blast_Score=134, Evalue=9e-32,
Organism=Caenorhabditis elegans, GI25146394, Length=439, Percent_Identity=25.5125284738041, Blast_Score=134, Evalue=1e-31,
Organism=Caenorhabditis elegans, GI17564084, Length=430, Percent_Identity=26.5116279069767, Blast_Score=133, Evalue=2e-31,
Organism=Caenorhabditis elegans, GI115532534, Length=347, Percent_Identity=30.835734870317, Blast_Score=125, Evalue=4e-29,
Organism=Caenorhabditis elegans, GI71990744, Length=298, Percent_Identity=29.5302013422819, Blast_Score=101, Evalue=1e-21,
Organism=Saccharomyces cerevisiae, GI6319478, Length=454, Percent_Identity=31.7180616740088, Blast_Score=239, Evalue=1e-63,
Organism=Saccharomyces cerevisiae, GI6320917, Length=467, Percent_Identity=35.117773019272, Blast_Score=235, Evalue=1e-62,
Organism=Saccharomyces cerevisiae, GI6324950, Length=469, Percent_Identity=33.0490405117271, Blast_Score=228, Evalue=3e-60,
Organism=Saccharomyces cerevisiae, GI6323821, Length=477, Percent_Identity=30.188679245283, Blast_Score=205, Evalue=1e-53,
Organism=Saccharomyces cerevisiae, GI6321828, Length=485, Percent_Identity=31.340206185567, Blast_Score=202, Evalue=1e-52,
Organism=Saccharomyces cerevisiae, GI6323822, Length=468, Percent_Identity=29.9145299145299, Blast_Score=195, Evalue=1e-50,
Organism=Saccharomyces cerevisiae, GI6325196, Length=470, Percent_Identity=29.3617021276596, Blast_Score=192, Evalue=1e-49,
Organism=Saccharomyces cerevisiae, GI6323757, Length=435, Percent_Identity=25.9770114942529, Blast_Score=115, Evalue=2e-26,
Organism=Saccharomyces cerevisiae, GI6321826, Length=482, Percent_Identity=26.5560165975104, Blast_Score=112, Evalue=2e-25,
Organism=Drosophila melanogaster, GI281362580, Length=472, Percent_Identity=31.7796610169492, Blast_Score=232, Evalue=4e-61,
Organism=Drosophila melanogaster, GI62472918, Length=472, Percent_Identity=31.7796610169492, Blast_Score=232, Evalue=4e-61,
Organism=Drosophila melanogaster, GI62472926, Length=472, Percent_Identity=31.7796610169492, Blast_Score=232, Evalue=4e-61,
Organism=Drosophila melanogaster, GI62472936, Length=472, Percent_Identity=31.7796610169492, Blast_Score=232, Evalue=4e-61,
Organism=Drosophila melanogaster, GI21356737, Length=472, Percent_Identity=31.7796610169492, Blast_Score=232, Evalue=4e-61,
Organism=Drosophila melanogaster, GI20129399, Length=476, Percent_Identity=33.8235294117647, Blast_Score=223, Evalue=2e-58,
Organism=Drosophila melanogaster, GI24650465, Length=474, Percent_Identity=30.5907172995781, Blast_Score=206, Evalue=3e-53,
Organism=Drosophila melanogaster, GI24585660, Length=458, Percent_Identity=29.0393013100437, Blast_Score=195, Evalue=6e-50,
Organism=Drosophila melanogaster, GI24666674, Length=471, Percent_Identity=27.1762208067941, Blast_Score=143, Evalue=3e-34,
Organism=Drosophila melanogaster, GI24668425, Length=455, Percent_Identity=26.5934065934066, Blast_Score=142, Evalue=8e-34,
Organism=Drosophila melanogaster, GI24668417, Length=455, Percent_Identity=26.5934065934066, Blast_Score=142, Evalue=8e-34,
Organism=Drosophila melanogaster, GI24668413, Length=455, Percent_Identity=26.5934065934066, Blast_Score=142, Evalue=8e-34,
Organism=Drosophila melanogaster, GI24638876, Length=468, Percent_Identity=27.1367521367521, Blast_Score=141, Evalue=1e-33,
Organism=Drosophila melanogaster, GI24638878, Length=468, Percent_Identity=27.1367521367521, Blast_Score=140, Evalue=2e-33,
Organism=Drosophila melanogaster, GI281360299, Length=333, Percent_Identity=28.2282282282282, Blast_Score=122, Evalue=8e-28,
Organism=Drosophila melanogaster, GI281360297, Length=333, Percent_Identity=28.2282282282282, Blast_Score=122, Evalue=8e-28,
Organism=Drosophila melanogaster, GI281360295, Length=333, Percent_Identity=28.2282282282282, Blast_Score=122, Evalue=8e-28,
Organism=Drosophila melanogaster, GI24586250, Length=333, Percent_Identity=28.2282282282282, Blast_Score=122, Evalue=8e-28,
Organism=Drosophila melanogaster, GI281360301, Length=333, Percent_Identity=28.2282282282282, Blast_Score=122, Evalue=8e-28,
Organism=Drosophila melanogaster, GI45552499, Length=333, Percent_Identity=27.3273273273273, Blast_Score=118, Evalue=1e-26,
Organism=Drosophila melanogaster, GI281360303, Length=333, Percent_Identity=27.3273273273273, Blast_Score=117, Evalue=1e-26,
Organism=Drosophila melanogaster, GI28574525, Length=446, Percent_Identity=26.2331838565022, Blast_Score=107, Evalue=2e-23,
Organism=Drosophila melanogaster, GI28571798, Length=463, Percent_Identity=24.4060475161987, Blast_Score=100, Evalue=2e-21,
Organism=Drosophila melanogaster, GI28571796, Length=463, Percent_Identity=24.4060475161987, Blast_Score=100, Evalue=2e-21,
Organism=Drosophila melanogaster, GI28571794, Length=463, Percent_Identity=24.4060475161987, Blast_Score=100, Evalue=2e-21,
Organism=Drosophila melanogaster, GI28571806, Length=463, Percent_Identity=24.4060475161987, Blast_Score=100, Evalue=2e-21,
Organism=Drosophila melanogaster, GI28571802, Length=463, Percent_Identity=24.4060475161987, Blast_Score=100, Evalue=2e-21,
Organism=Drosophila melanogaster, GI28571800, Length=463, Percent_Identity=24.4060475161987, Blast_Score=100, Evalue=2e-21,
Organism=Drosophila melanogaster, GI281360293, Length=143, Percent_Identity=31.4685314685315, Blast_Score=81, Evalue=2e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016161
- InterPro:   IPR016163
- InterPro:   IPR016160
- InterPro:   IPR016162
- InterPro:   IPR015590 [H]

Pfam domain/function: PF00171 Aldedh [H]

EC number: =1.2.1.79 [H]

Molecular weight: Translated: 55580; Mature: 55449

Theoretical pI: Translated: 6.60; Mature: 6.60

Prosite motif: PS00687 ALDEHYDE_DEHYDR_GLU

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MALQRPASITDAFLERLVARVPSTSGGTWKLTEVYTGDLLVELPQSTPADIEAAFAAARA
CCCCCCCHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCEEEECCCCCCCHHHHHHHHHHH
AQRSWAARPLKERLEVFKRAHALFLDNAHTTTDLIQVESGKNRRMAIEETCDPVMVMSHY
HHHHHHHCHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCEEHHHHCCHHHHHHHH
LKRAPHLLKPVKRGGPIPFLSSSTEIRQPKGVVGIIAPWNFPFATGISDSIPALMAGNAI
HHHCCHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCHHHCCCEE
VLKPDNKTALSPLYGVQMLEEAGLPKGLFQVVCGEGPDVGPTLIDNANYVMFTGSTATGR
EECCCCCCCCCHHHHHHHHHHCCCCHHHHHHHCCCCCCCCCEEECCCCEEEEECCCCCCH
VIGERAGRNLIGCCLELGGKNPMIVLEDADLDEVVQGAIFGAFGNTGQICMHIERMYLPA
HHHHHHCCHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHEECCCCCCHHHHHHHHHHCCH
SRYDEFRSRFVAATEALTIGAAYDFGPDMGSLVSPDHMERVRGHVDDAVAKGATVLTGGR
HHHHHHHHHHHHHHHHEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCEEEECCC
SRPDLGPAFFEPTILEGVTQDMLCGVTETFGPVVALHRYATVDEAIALANDTDYGLNASV
CCCCCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
WGGDIASACQVGQRIETGNVNVNDILATAYASKGTPSGGVKQSGVGARHGDQGLLKYTDV
CCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEECCH
QNLAVLKKQVMGARPGQDYEKYVKGMLSGLRMMRKTGIR
HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
ALQRPASITDAFLERLVARVPSTSGGTWKLTEVYTGDLLVELPQSTPADIEAAFAAARA
CCCCCCHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCEEEECCCCCCCHHHHHHHHHHH
AQRSWAARPLKERLEVFKRAHALFLDNAHTTTDLIQVESGKNRRMAIEETCDPVMVMSHY
HHHHHHHCHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCEEHHHHCCHHHHHHHH
LKRAPHLLKPVKRGGPIPFLSSSTEIRQPKGVVGIIAPWNFPFATGISDSIPALMAGNAI
HHHCCHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCHHHCCCEE
VLKPDNKTALSPLYGVQMLEEAGLPKGLFQVVCGEGPDVGPTLIDNANYVMFTGSTATGR
EECCCCCCCCCHHHHHHHHHHCCCCHHHHHHHCCCCCCCCCEEECCCCEEEEECCCCCCH
VIGERAGRNLIGCCLELGGKNPMIVLEDADLDEVVQGAIFGAFGNTGQICMHIERMYLPA
HHHHHHCCHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHEECCCCCCHHHHHHHHHHCCH
SRYDEFRSRFVAATEALTIGAAYDFGPDMGSLVSPDHMERVRGHVDDAVAKGATVLTGGR
HHHHHHHHHHHHHHHHEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCEEEECCC
SRPDLGPAFFEPTILEGVTQDMLCGVTETFGPVVALHRYATVDEAIALANDTDYGLNASV
CCCCCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
WGGDIASACQVGQRIETGNVNVNDILATAYASKGTPSGGVKQSGVGARHGDQGLLKYTDV
CCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEECCH
QNLAVLKKQVMGARPGQDYEKYVKGMLSGLRMMRKTGIR
HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 12788972 [H]