| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is cysO [H]
Identifier: 119718205
GI number: 119718205
Start: 4205937
End: 4206218
Strand: Reverse
Name: cysO [H]
Synonym: Noca_3986
Alternate gene names: 119718205
Gene position: 4206218-4205937 (Counterclockwise)
Preceding gene: 119718206
Following gene: 119718204
Centisome position: 84.36
GC content: 70.92
Gene sequence:
>282_bases ATGAGCGTCTCCGTCCGGATCCCCACGATCCTGCGCACCTACACCGGCGGCGAGTCCGAGGTGAGCGCCTCCGGCGCCAC GCTGGCCGAGGTCCTCGACGACCTCGACGGCAGCTACGGCGGGATCAAGGCCCGGATCCTCGACGACGCCGGCGAGCTGC GCCGCTTCGTCAACGTCTACGTCGGCAACGACGACGTGCGGTTCCTCGACAACCTGGCGACGCCCACGCCCGACGGCGCC CAGATCTCGGTCATCCCGGCCGTCGCCGGCGGTTGCTGCTGA
Upstream 100 bases:
>100_bases TCTCCGGCACCGTGGCGCCCGCCGCGACCATCGACCCGTCGTACCCTGCCTTCGCCGCCACCGGCCTGGCCTGAGCACCC GAGCACCCGAGGAGCTGACC
Downstream 100 bases:
>100_bases GGCTGCCCGCTCGTCATGCGTGCGGGCGGCCCGCGACACGTCGCGTTCACCCGGGCATGATTGAACGGACCGGTGACCCG TGCCCGGACCCGTCTCGCCG
Product: sulfur transfer protein ThiS
Products: NA
Alternate protein names: 9.5 kDa culture filtrate antigen cfp10A [H]
Number of amino acids: Translated: 93; Mature: 92
Protein sequence:
>93_residues MSVSVRIPTILRTYTGGESEVSASGATLAEVLDDLDGSYGGIKARILDDAGELRRFVNVYVGNDDVRFLDNLATPTPDGA QISVIPAVAGGCC
Sequences:
>Translated_93_residues MSVSVRIPTILRTYTGGESEVSASGATLAEVLDDLDGSYGGIKARILDDAGELRRFVNVYVGNDDVRFLDNLATPTPDGA QISVIPAVAGGCC >Mature_92_residues SVSVRIPTILRTYTGGESEVSASGATLAEVLDDLDGSYGGIKARILDDAGELRRFVNVYVGNDDVRFLDNLATPTPDGAQ ISVIPAVAGGCC
Specific function: In its thiocarboxylated form (CysO-COSH), is the sulfur donor in the CysM-dependent cysteine biosynthetic pathway [H]
COG id: COG1977
COG function: function code H; Molybdopterin converting factor, small subunit
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the sulfur carrier protein CysO family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012675 - InterPro: IPR016155 - InterPro: IPR003749 [H]
Pfam domain/function: PF02597 ThiS [H]
EC number: NA
Molecular weight: Translated: 9675; Mature: 9544
Theoretical pI: Translated: 4.06; Mature: 4.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSVSVRIPTILRTYTGGESEVSASGATLAEVLDDLDGSYGGIKARILDDAGELRRFVNVY CCEEEECCCEEEECCCCCCCCCCCCCHHHHHHHHCCCCCCCEEEEEECCHHHHHHHHEEE VGNDDVRFLDNLATPTPDGAQISVIPAVAGGCC ECCCCHHHHHHCCCCCCCCCEEEEECCCCCCCC >Mature Secondary Structure SVSVRIPTILRTYTGGESEVSASGATLAEVLDDLDGSYGGIKARILDDAGELRRFVNVY CEEEECCCEEEECCCCCCCCCCCCCHHHHHHHHCCCCCCCEEEEEECCHHHHHHHHEEE VGNDDVRFLDNLATPTPDGAQISVIPAVAGGCC ECCCCHHHHHHCCCCCCCCCEEEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12788972 [H]