| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is thrC [H]
Identifier: 119718206
GI number: 119718206
Start: 4206245
End: 4207519
Strand: Reverse
Name: thrC [H]
Synonym: Noca_3987
Alternate gene names: 119718206
Gene position: 4207519-4206245 (Counterclockwise)
Preceding gene: 119718207
Following gene: 119718205
Centisome position: 84.39
GC content: 70.35
Gene sequence:
>1275_bases ATGAGCGCCGTCGTCATCGAGAAGACCAGCACGCCGGGCCTGCGCGAGGGCGCGTTCGGCAACGCCACCGCCCTCTCCTG CCGCGAGTGCGGCCACCAGGTCGAGCTCGGACCGCACTACGCGTGTCCGGAGTGCTTCGGCCCCCTGGAGATCGCCTACG ACTTCCCCCGGGTCACCCGCGAGGAGATCGAGGCCGGCCCGCGCAACATCTGGCGCTACAAGGCGCTGCTGCCGGTGCCC GCCGACATCGAGGACAGCCCCAACACCGAGCCCGGCTTCACCCGCCTGCTGCGTGCGGGCAACCTGGCCGCCGAGCTCGG GATCGCGAACCTGTGGGTCAAGGACGACTCCACCAACCCCACCAACTCCTTCAAGGACCGCGTCGTCGCCTGCGCGCTGA GCGCGGCCCGCGAGTTCGGCAGCAAGGTCTTCGCCTGTCCGAGCACCGGCAACCTCGCCAACGCGGTCGCCGCCGCGGGC GCCCGCGCCGGCATCAAGACCGTGGTGTTCATCCCGAGCAACCTCGAGCAGCCCAAGCAGGTCAACTCCGCCGTCTTCAC CGACTCCCTGGTGGCCGTCAACGGCAACTACGACGACGTCAACCGGCTCGCTTCCGAGATCGCCGGCGAGGAGGAGGGCT GGGCGTTCGTGAACGTCAACGTCCGCCCCTACTACGCCGAGGGCTCCAAGACCCTCGGCTACGAGATCGCCGAGCAGCTC GGCTGGCGGCTGCCGGACCAGATCGTGATCCCGGTCGCGAGCGGCTCGCAGCTGACCAAGGTGCACAAGGCCTTCCAGGA GCTGATCCGGCTCGGCCTCGTGGAGGACAAGCCCTACCGCGTGTACGGCGCGCAGGCCGCGGGCTGCTCCCCGGTCTCGG TCGCCTACAAGGCCGGCGTCGACGCCATCCGCCCGGTCAAGCCGGACACGATCGCCAAGAGCCTGGCGATCGGCAACCCC GCCGACGGCATCTACGTCCTCGACATCTGCCGCGAGACCGGCGGCGCGGTCGAGGACGTCACCGACGACGAGATCCGCGC CGGCATCGTGCTGCTGGCCCGCACCGAGGGGATCTTCACCGAGACCGCCGGCGGCACCACCGTCGCCGTGTTGAAGAAGC TCGTCGAGACCGGCCAGCTCGACACCTCGCTCGAGACCGTGGTGATCAACACCGGCCACGGCCTGAAGACCCTGGACGCG GTCTCCGGCACCGTGGCGCCCGCCGCGACCATCGACCCGTCGTACCCTGCCTTCGCCGCCACCGGCCTGGCCTGA
Upstream 100 bases:
>100_bases CTCCGCCGCCCGGCATCCAGCCAGGAAGCGGTTCGCGGAAACGGTGCCAATTCCGCCCGGGGCGACCGCCGCACCCGGGG AAGATGAGAAGGAGGACTTC
Downstream 100 bases:
>100_bases GCACCCGAGCACCCGAGGAGCTGACCATGAGCGTCTCCGTCCGGATCCCCACGATCCTGCGCACCTACACCGGCGGCGAG TCCGAGGTGAGCGCCTCCGG
Product: threonine synthase
Products: NA
Alternate protein names: TS [H]
Number of amino acids: Translated: 424; Mature: 423
Protein sequence:
>424_residues MSAVVIEKTSTPGLREGAFGNATALSCRECGHQVELGPHYACPECFGPLEIAYDFPRVTREEIEAGPRNIWRYKALLPVP ADIEDSPNTEPGFTRLLRAGNLAAELGIANLWVKDDSTNPTNSFKDRVVACALSAAREFGSKVFACPSTGNLANAVAAAG ARAGIKTVVFIPSNLEQPKQVNSAVFTDSLVAVNGNYDDVNRLASEIAGEEEGWAFVNVNVRPYYAEGSKTLGYEIAEQL GWRLPDQIVIPVASGSQLTKVHKAFQELIRLGLVEDKPYRVYGAQAAGCSPVSVAYKAGVDAIRPVKPDTIAKSLAIGNP ADGIYVLDICRETGGAVEDVTDDEIRAGIVLLARTEGIFTETAGGTTVAVLKKLVETGQLDTSLETVVINTGHGLKTLDA VSGTVAPAATIDPSYPAFAATGLA
Sequences:
>Translated_424_residues MSAVVIEKTSTPGLREGAFGNATALSCRECGHQVELGPHYACPECFGPLEIAYDFPRVTREEIEAGPRNIWRYKALLPVP ADIEDSPNTEPGFTRLLRAGNLAAELGIANLWVKDDSTNPTNSFKDRVVACALSAAREFGSKVFACPSTGNLANAVAAAG ARAGIKTVVFIPSNLEQPKQVNSAVFTDSLVAVNGNYDDVNRLASEIAGEEEGWAFVNVNVRPYYAEGSKTLGYEIAEQL GWRLPDQIVIPVASGSQLTKVHKAFQELIRLGLVEDKPYRVYGAQAAGCSPVSVAYKAGVDAIRPVKPDTIAKSLAIGNP ADGIYVLDICRETGGAVEDVTDDEIRAGIVLLARTEGIFTETAGGTTVAVLKKLVETGQLDTSLETVVINTGHGLKTLDA VSGTVAPAATIDPSYPAFAATGLA >Mature_423_residues SAVVIEKTSTPGLREGAFGNATALSCRECGHQVELGPHYACPECFGPLEIAYDFPRVTREEIEAGPRNIWRYKALLPVPA DIEDSPNTEPGFTRLLRAGNLAAELGIANLWVKDDSTNPTNSFKDRVVACALSAAREFGSKVFACPSTGNLANAVAAAGA RAGIKTVVFIPSNLEQPKQVNSAVFTDSLVAVNGNYDDVNRLASEIAGEEEGWAFVNVNVRPYYAEGSKTLGYEIAEQLG WRLPDQIVIPVASGSQLTKVHKAFQELIRLGLVEDKPYRVYGAQAAGCSPVSVAYKAGVDAIRPVKPDTIAKSLAIGNPA DGIYVLDICRETGGAVEDVTDDEIRAGIVLLARTEGIFTETAGGTTVAVLKKLVETGQLDTSLETVVINTGHGLKTLDAV SGTVAPAATIDPSYPAFAATGLA
Specific function: Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine [H]
COG id: COG0498
COG function: function code E; Threonine synthase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the threonine synthase family [H]
Homologues:
None
Paralogues:
None
Copy number: 1344 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 800 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001926 - InterPro: IPR000634 - InterPro: IPR004450 [H]
Pfam domain/function: PF00291 PALP [H]
EC number: =4.2.3.1 [H]
Molecular weight: Translated: 44779; Mature: 44648
Theoretical pI: Translated: 4.64; Mature: 4.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 0.2 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAVVIEKTSTPGLREGAFGNATALSCRECGHQVELGPHYACPECFGPLEIAYDFPRVTR CCEEEEECCCCCCCCCCCCCCCCCHHHHHCCCEEECCCCCCCHHHCCCHHEEECCCCCCH EEIEAGPRNIWRYKALLPVPADIEDSPNTEPGFTRLLRAGNLAAELGIANLWVKDDSTNP HHHHCCCCCEEEEEEECCCCCCCCCCCCCCHHHHHHHHHCCHHHHCCEEEEEEECCCCCC TNSFKDRVVACALSAAREFGSKVFACPSTGNLANAVAAAGARAGIKTVVFIPSNLEQPKQ CHHHHHHHHHHHHHHHHHHCCEEEECCCCCCHHHHHHHHCCCCCCEEEEECCCCCCCHHH VNSAVFTDSLVAVNGNYDDVNRLASEIAGEEEGWAFVNVNVRPYYAEGSKTLGYEIAEQL HHHHHEECEEEEEECCHHHHHHHHHHHCCCCCCEEEEEEEEEEEECCCCCCHHHHHHHHH GWRLPDQIVIPVASGSQLTKVHKAFQELIRLGLVEDKPYRVYGAQAAGCSPVSVAYKAGV CCCCCCCEEEEECCCCHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCHHHHHHCCC DAIRPVKPDTIAKSLAIGNPADGIYVLDICRETGGAVEDVTDDEIRAGIVLLARTEGIFT CCCCCCCCHHHHHHHCCCCCCCCEEEEEEEHHCCCCCCCCCCCHHHCCEEEEEECCCCEE ETAGGTTVAVLKKLVETGQLDTSLETVVINTGHGLKTLDAVSGTVAPAATIDPSYPAFAA ECCCCHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCHHHHHCCCCCCCCCCCCCCCCHHH TGLA CCCC >Mature Secondary Structure SAVVIEKTSTPGLREGAFGNATALSCRECGHQVELGPHYACPECFGPLEIAYDFPRVTR CEEEEECCCCCCCCCCCCCCCCCHHHHHCCCEEECCCCCCCHHHCCCHHEEECCCCCCH EEIEAGPRNIWRYKALLPVPADIEDSPNTEPGFTRLLRAGNLAAELGIANLWVKDDSTNP HHHHCCCCCEEEEEEECCCCCCCCCCCCCCHHHHHHHHHCCHHHHCCEEEEEEECCCCCC TNSFKDRVVACALSAAREFGSKVFACPSTGNLANAVAAAGARAGIKTVVFIPSNLEQPKQ CHHHHHHHHHHHHHHHHHHCCEEEECCCCCCHHHHHHHHCCCCCCEEEEECCCCCCCHHH VNSAVFTDSLVAVNGNYDDVNRLASEIAGEEEGWAFVNVNVRPYYAEGSKTLGYEIAEQL HHHHHEECEEEEEECCHHHHHHHHHHHCCCCCCEEEEEEEEEEEECCCCCCHHHHHHHHH GWRLPDQIVIPVASGSQLTKVHKAFQELIRLGLVEDKPYRVYGAQAAGCSPVSVAYKAGV CCCCCCCEEEEECCCCHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCHHHHHHCCC DAIRPVKPDTIAKSLAIGNPADGIYVLDICRETGGAVEDVTDDEIRAGIVLLARTEGIFT CCCCCCCCHHHHHHHCCCCCCCCEEEEEEEHHCCCCCCCCCCCHHHCCEEEEEECCCCEE ETAGGTTVAVLKKLVETGQLDTSLETVVINTGHGLKTLDAVSGTVAPAATIDPSYPAFAA ECCCCHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCHHHHHCCCCCCCCCCCCCCCCHHH TGLA CCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]