| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is 119718070
Identifier: 119718070
GI number: 119718070
Start: 4069225
End: 4069689
Strand: Reverse
Name: 119718070
Synonym: Noca_3850
Alternate gene names: NA
Gene position: 4069689-4069225 (Counterclockwise)
Preceding gene: 119718071
Following gene: 119718067
Centisome position: 81.62
GC content: 70.54
Gene sequence:
>465_bases ATGAGCCAAGTCCTGACGATGTGGCAGAGGACGAGCGCGGTCCCCGTGGTGGGCAGCCGGCTGTTCTCGGTGCTGTTCGC GCAGAAGGCGCCGTACTTCGCCTCGATCCGCCCGCGCTTCCTGAGCATCGAGCCGAACCGGGTCGAGCTGCTGATCCCCA AGCGACGCCGGGTCCACAACCACCTCGGGACCGTGCACGCGATCGCGCTGTGCAACGGGCTCGAGGCCGCGATGGGGGCG CTCGCCGAGGCCACGATCCCCGCCGACAGGCGCTGGATCCCCAAGGGGATGGAGGTCGCCTACACCGCCAAGGCCACCAG CGACATCGTGTGCGTCGCCGAGACCGACCCCGAGCAGTGGGTGTCGGGCGACCCGGACCTGCCCGTGCGGGTGCACGGCA TCCGCGACGACGGCACCGTCGTGATCGAGGGCGTGATCCGGCTCTGGGTCACCCCGCGGTCGTGA
Upstream 100 bases:
>100_bases GCAGGGCCGGCGGTGGCCCAGCAACCGTCCGGGGGTCGGGTTCGGCTGCCTGGGCACCGCTGGCCGGCGGCAACCGGTTA CTGGTCGGTAATATCACCGC
Downstream 100 bases:
>100_bases GGAAGATCGGGTTCGTCAGCGCCACCATCTGCCCGGTGGCCGACTCCCGGCGTACCTCCGCCCGGACGAACGCCGTCCCA CCGGGCACCGCGGCGTCGAG
Product: hypothetical protein
Products: NA
Alternate protein names: Thioesterase; Phenylacetic Acid Degradation-Like Protein; Thioesterase Superfamily Protein
Number of amino acids: Translated: 154; Mature: 153
Protein sequence:
>154_residues MSQVLTMWQRTSAVPVVGSRLFSVLFAQKAPYFASIRPRFLSIEPNRVELLIPKRRRVHNHLGTVHAIALCNGLEAAMGA LAEATIPADRRWIPKGMEVAYTAKATSDIVCVAETDPEQWVSGDPDLPVRVHGIRDDGTVVIEGVIRLWVTPRS
Sequences:
>Translated_154_residues MSQVLTMWQRTSAVPVVGSRLFSVLFAQKAPYFASIRPRFLSIEPNRVELLIPKRRRVHNHLGTVHAIALCNGLEAAMGA LAEATIPADRRWIPKGMEVAYTAKATSDIVCVAETDPEQWVSGDPDLPVRVHGIRDDGTVVIEGVIRLWVTPRS >Mature_153_residues SQVLTMWQRTSAVPVVGSRLFSVLFAQKAPYFASIRPRFLSIEPNRVELLIPKRRRVHNHLGTVHAIALCNGLEAAMGAL AEATIPADRRWIPKGMEVAYTAKATSDIVCVAETDPEQWVSGDPDLPVRVHGIRDDGTVVIEGVIRLWVTPRS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17037; Mature: 16906
Theoretical pI: Translated: 9.32; Mature: 9.32
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQVLTMWQRTSAVPVVGSRLFSVLFAQKAPYFASIRPRFLSIEPNRVELLIPKRRRVHN CCHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCEECCCCEEEEECCCEEEEEECCHHHHHH HLGTVHAIALCNGLEAAMGALAEATIPADRRWIPKGMEVAYTAKATSDIVCVAETDPEQW HHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCCCCEEEEECCCHHHH VSGDPDLPVRVHGIRDDGTVVIEGVIRLWVTPRS CCCCCCCCEEEEEECCCCEEEEEEEEEEEEECCC >Mature Secondary Structure SQVLTMWQRTSAVPVVGSRLFSVLFAQKAPYFASIRPRFLSIEPNRVELLIPKRRRVHN CHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCEECCCCEEEEECCCEEEEEECCHHHHHH HLGTVHAIALCNGLEAAMGALAEATIPADRRWIPKGMEVAYTAKATSDIVCVAETDPEQW HHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCCCCEEEEECCCHHHH VSGDPDLPVRVHGIRDDGTVVIEGVIRLWVTPRS CCCCCCCCEEEEEECCCCEEEEEEEEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA