Definition Nocardioides sp. JS614 chromosome, complete genome.
Accession NC_008699
Length 4,985,871

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The map label for this gene is 119718071

Identifier: 119718071

GI number: 119718071

Start: 4069801

End: 4070685

Strand: Reverse

Name: 119718071

Synonym: Noca_3851

Alternate gene names: NA

Gene position: 4070685-4069801 (Counterclockwise)

Preceding gene: 119718072

Following gene: 119718070

Centisome position: 81.64

GC content: 76.84

Gene sequence:

>885_bases
ATGGGCACGCGGCAGGGTCGTTCGAGTCGTTCGGGCCAACCGGGTCGGTGGCGGTGGTGGGCGGCGCAGGTCGCGGTGCC
GCTGCTGGTGGCCGCCTGCGGGACGCCGGGCTCGGACCCCGGCGCGGCCCGGGACGCGACGCCTGAGCCCACGCAGGCCT
CCACCCCGGCGTCCCCGCCGGATCCGAGTGGCCAGGCCTACGCACCGGGCACGATGCCCGACCTCGTCGGGCTCGGCTCG
GCCGAGGCCGGCCGCTTGCTCGGCGCGCTCGAGCTGGGCTCGGAGTGGAGCACCGTCGCCGTGCGCTGCGAGGCCCGGCC
CGGCACCGTCGTCCGCCAGGCACCGGCCGCCGGCTCGGTGCTCACCGACCACACGGTGGTGCGGCTGCGCACCGCGACTC
TCGACCTCGAGGCGTTCCGCGGGCCCTGCGAGGCCGAGGAGCTCGGGCCCGTGACGGGCGCGGACGCCGTGCTGGCCCGC
AAGCTCTACCGGTTCGCGGCCGACCCCTCGGTCGGGGCGCCGTTCGTCGCCGGTGAGGTGTGGACCGGCATCGAGGACGG
CCTGGCGTCGACGACCGTCGGCGCCGCGGAGCGGACCGACCTCGCCGCCTGGCAGCTCGACGCGGAGTACGCCGAGCGCG
GCGGCCCGTTCTCGGCGCTGGACGTCCTGGCGAGCAGCGGCGGGTACTACGAGCTGCACCGCGGCATCGTCGGCACCTGC
CCGGGCGGCAACGCGAAGGCGCCGGCCGGGCTCGCCGGGCTGCGCGCGATCAGCCTCACCGTCCCCGAGGACGCGATCGA
CTCCTGCCTGCAGTGGTGGGGCGTGACCGTGTTCTTGGACCACGACCAGATCCGCGGCGTCGCGCTCCGGCTCGGATCGC
CGTGA

Upstream 100 bases:

>100_bases
GGTCGACCCCCTCGCCGCGCGCGCCGCGCGCCTGAGCGGTCCGGTAAACCCGGCGGCTCCACCGCGCGTCCCACTTGTAG
GACACCAGGGGAGGCGCGAG

Downstream 100 bases:

>100_bases
CCCTGGCCGACGCAGGGCCGGCGGTGGCCCAGCAACCGTCCGGGGGTCGGGTTCGGCTGCCTGGGCACCGCTGGCCGGCG
GCAACCGGTTACTGGTCGGT

Product: PASTA domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 294; Mature: 293

Protein sequence:

>294_residues
MGTRQGRSSRSGQPGRWRWWAAQVAVPLLVAACGTPGSDPGAARDATPEPTQASTPASPPDPSGQAYAPGTMPDLVGLGS
AEAGRLLGALELGSEWSTVAVRCEARPGTVVRQAPAAGSVLTDHTVVRLRTATLDLEAFRGPCEAEELGPVTGADAVLAR
KLYRFAADPSVGAPFVAGEVWTGIEDGLASTTVGAAERTDLAAWQLDAEYAERGGPFSALDVLASSGGYYELHRGIVGTC
PGGNAKAPAGLAGLRAISLTVPEDAIDSCLQWWGVTVFLDHDQIRGVALRLGSP

Sequences:

>Translated_294_residues
MGTRQGRSSRSGQPGRWRWWAAQVAVPLLVAACGTPGSDPGAARDATPEPTQASTPASPPDPSGQAYAPGTMPDLVGLGS
AEAGRLLGALELGSEWSTVAVRCEARPGTVVRQAPAAGSVLTDHTVVRLRTATLDLEAFRGPCEAEELGPVTGADAVLAR
KLYRFAADPSVGAPFVAGEVWTGIEDGLASTTVGAAERTDLAAWQLDAEYAERGGPFSALDVLASSGGYYELHRGIVGTC
PGGNAKAPAGLAGLRAISLTVPEDAIDSCLQWWGVTVFLDHDQIRGVALRLGSP
>Mature_293_residues
GTRQGRSSRSGQPGRWRWWAAQVAVPLLVAACGTPGSDPGAARDATPEPTQASTPASPPDPSGQAYAPGTMPDLVGLGSA
EAGRLLGALELGSEWSTVAVRCEARPGTVVRQAPAAGSVLTDHTVVRLRTATLDLEAFRGPCEAEELGPVTGADAVLARK
LYRFAADPSVGAPFVAGEVWTGIEDGLASTTVGAAERTDLAAWQLDAEYAERGGPFSALDVLASSGGYYELHRGIVGTCP
GGNAKAPAGLAGLRAISLTVPEDAIDSCLQWWGVTVFLDHDQIRGVALRLGSP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30265; Mature: 30134

Theoretical pI: Translated: 4.65; Mature: 4.65

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
0.3 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGTRQGRSSRSGQPGRWRWWAAQVAVPLLVAACGTPGSDPGAARDATPEPTQASTPASPP
CCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCC
DPSGQAYAPGTMPDLVGLGSAEAGRLLGALELGSEWSTVAVRCEARPGTVVRQAPAAGSV
CCCCCCCCCCCCHHHHCCCCCCHHHHEEHHHCCCCCCEEEEEEECCCCCEEEECCCCCCE
LTDHTVVRLRTATLDLEAFRGPCEAEELGPVTGADAVLARKLYRFAADPSVGAPFVAGEV
ECCCEEEEEEEEEEEHHHHCCCCCHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCEECCHH
WTGIEDGLASTTVGAAERTDLAAWQLDAEYAERGGPFSALDVLASSGGYYELHRGIVGTC
HCCHHHCHHHHHCCCCCCCCHHEEEECHHHHHCCCCHHHHHHHHCCCCEEEECCCEEEEC
PGGNAKAPAGLAGLRAISLTVPEDAIDSCLQWWGVTVFLDHDQIRGVALRLGSP
CCCCCCCCCCHHCEEEEEEECCHHHHHHHHHHCCEEEEEECCCCCEEEEEECCC
>Mature Secondary Structure 
GTRQGRSSRSGQPGRWRWWAAQVAVPLLVAACGTPGSDPGAARDATPEPTQASTPASPP
CCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCC
DPSGQAYAPGTMPDLVGLGSAEAGRLLGALELGSEWSTVAVRCEARPGTVVRQAPAAGSV
CCCCCCCCCCCCHHHHCCCCCCHHHHEEHHHCCCCCCEEEEEEECCCCCEEEECCCCCCE
LTDHTVVRLRTATLDLEAFRGPCEAEELGPVTGADAVLARKLYRFAADPSVGAPFVAGEV
ECCCEEEEEEEEEEEHHHHCCCCCHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCEECCHH
WTGIEDGLASTTVGAAERTDLAAWQLDAEYAERGGPFSALDVLASSGGYYELHRGIVGTC
HCCHHHCHHHHHCCCCCCCCHHEEEECHHHHHCCCCHHHHHHHHCCCCEEEECCCEEEEC
PGGNAKAPAGLAGLRAISLTVPEDAIDSCLQWWGVTVFLDHDQIRGVALRLGSP
CCCCCCCCCCHHCEEEEEEECCHHHHHHHHHHCCEEEEEECCCCCEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA