| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
Click here to switch to the map view.
The map label for this gene is 119718055
Identifier: 119718055
GI number: 119718055
Start: 4054562
End: 4055278
Strand: Reverse
Name: 119718055
Synonym: Noca_3835
Alternate gene names: NA
Gene position: 4055278-4054562 (Counterclockwise)
Preceding gene: 119718057
Following gene: 119718047
Centisome position: 81.34
GC content: 76.99
Gene sequence:
>717_bases GTGGTCCTCCGGGGGGTCGCGAGCCCGGGCTCGCGCAGGTCTGTACGCCGTCGCACGGCGGCGATCGGCGCGCTCCTCGT GTTCCTCCTGGCCTCCGCGCTGATCCTGCGCGTCGCCGACCGTGCCGGCGCGGACGCCGACCGATGCCGGGCCTTCACGG CCGACTCCGTCGCCCGGGCCGCCCAGGTCAGCGGCTCCGGCGACCGGGTCGTCGTGATCGGCGACTCCTGGTCCGCGGGC CTCGGTCTGGACCGGCCGGCCGCCTCCTGGCCCTCGCGGCTGCCCGGTGCGGTGCACGTGGCCGGGTTCTCCGGCTCCGG TTTCAGCGTGCACGCGAGCGCCTGCGCCGGGGTCTCGTTCGCCGACCGGGCGCCGGCCGCCCTGCGCGGCGGCGCCGACC TCGTGGTGGTCGAGGGCGGGCTGAACGACTACGACCGGCCCGACAGCGAGATCCGGGCCGGGTTCGCGCGGCTGATGACC GCCCTGGACGGGCAGCGGGTGGTCGTGGTCGGCCCGGCCAGCGCGCCGTCCCGCGCGGCCGCCGTACCCCACGTCGACGC GCTGCTCGCCTCCCTCTCCGACTGGTACGGCGTCCCCTACATCCGCACGTCCGGCCTCCGGCTGGACTACCTCGGCGACC GTCTCCACCTCACCCTCGCCGGCCACGACGCCTTCGGCGACTACGTCGCCTCGCGGCTCGCCCGCCTGCCCTCCTGA
Upstream 100 bases:
>100_bases TACTCACTCATCCGACCAGCCTGCCAGGGTTTCTTGCAGGTTCATCACGGGTTGGCAACATCCCGGGCGGGCGGTCGCGC CGCGACGCATCATTGCTCGC
Downstream 100 bases:
>100_bases GCTGTAACGCCCGTTTACCCTGCCCTCCCACCGTGCTGCAACATCCCGGGTAGATCGGGTAACAGGGCGTTACAGCGTTC GGCGCCGGGCGGTTGGCGCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 238; Mature: 238
Protein sequence:
>238_residues MVLRGVASPGSRRSVRRRTAAIGALLVFLLASALILRVADRAGADADRCRAFTADSVARAAQVSGSGDRVVVIGDSWSAG LGLDRPAASWPSRLPGAVHVAGFSGSGFSVHASACAGVSFADRAPAALRGGADLVVVEGGLNDYDRPDSEIRAGFARLMT ALDGQRVVVVGPASAPSRAAAVPHVDALLASLSDWYGVPYIRTSGLRLDYLGDRLHLTLAGHDAFGDYVASRLARLPS
Sequences:
>Translated_238_residues MVLRGVASPGSRRSVRRRTAAIGALLVFLLASALILRVADRAGADADRCRAFTADSVARAAQVSGSGDRVVVIGDSWSAG LGLDRPAASWPSRLPGAVHVAGFSGSGFSVHASACAGVSFADRAPAALRGGADLVVVEGGLNDYDRPDSEIRAGFARLMT ALDGQRVVVVGPASAPSRAAAVPHVDALLASLSDWYGVPYIRTSGLRLDYLGDRLHLTLAGHDAFGDYVASRLARLPS >Mature_238_residues MVLRGVASPGSRRSVRRRTAAIGALLVFLLASALILRVADRAGADADRCRAFTADSVARAAQVSGSGDRVVVIGDSWSAG LGLDRPAASWPSRLPGAVHVAGFSGSGFSVHASACAGVSFADRAPAALRGGADLVVVEGGLNDYDRPDSEIRAGFARLMT ALDGQRVVVVGPASAPSRAAAVPHVDALLASLSDWYGVPYIRTSGLRLDYLGDRLHLTLAGHDAFGDYVASRLARLPS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24572; Mature: 24572
Theoretical pI: Translated: 9.94; Mature: 9.94
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVLRGVASPGSRRSVRRRTAAIGALLVFLLASALILRVADRAGADADRCRAFTADSVARA CEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCHHHHHHH AQVSGSGDRVVVIGDSWSAGLGLDRPAASWPSRLPGAVHVAGFSGSGFSVHASACAGVSF HHCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCEEEHHHHCCCCC ADRAPAALRGGADLVVVEGGLNDYDRPDSEIRAGFARLMTALDGQRVVVVGPASAPSRAA CCCCCHHHCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCC AVPHVDALLASLSDWYGVPYIRTSGLRLDYLGDRLHLTLAGHDAFGDYVASRLARLPS CCCHHHHHHHHHHHHCCCCEEEECCEEEEECCCEEEEEEECCCHHHHHHHHHHHHCCC >Mature Secondary Structure MVLRGVASPGSRRSVRRRTAAIGALLVFLLASALILRVADRAGADADRCRAFTADSVARA CEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCHHHHHHH AQVSGSGDRVVVIGDSWSAGLGLDRPAASWPSRLPGAVHVAGFSGSGFSVHASACAGVSF HHCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCEEEHHHHCCCCC ADRAPAALRGGADLVVVEGGLNDYDRPDSEIRAGFARLMTALDGQRVVVVGPASAPSRAA CCCCCHHHCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCC AVPHVDALLASLSDWYGVPYIRTSGLRLDYLGDRLHLTLAGHDAFGDYVASRLARLPS CCCHHHHHHHHHHHHCCCCEEEECCEEEEECCCEEEEEEECCCHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA