Definition Nocardioides sp. JS614 chromosome, complete genome.
Accession NC_008699
Length 4,985,871

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The map label for this gene is 119718055

Identifier: 119718055

GI number: 119718055

Start: 4054562

End: 4055278

Strand: Reverse

Name: 119718055

Synonym: Noca_3835

Alternate gene names: NA

Gene position: 4055278-4054562 (Counterclockwise)

Preceding gene: 119718057

Following gene: 119718047

Centisome position: 81.34

GC content: 76.99

Gene sequence:

>717_bases
GTGGTCCTCCGGGGGGTCGCGAGCCCGGGCTCGCGCAGGTCTGTACGCCGTCGCACGGCGGCGATCGGCGCGCTCCTCGT
GTTCCTCCTGGCCTCCGCGCTGATCCTGCGCGTCGCCGACCGTGCCGGCGCGGACGCCGACCGATGCCGGGCCTTCACGG
CCGACTCCGTCGCCCGGGCCGCCCAGGTCAGCGGCTCCGGCGACCGGGTCGTCGTGATCGGCGACTCCTGGTCCGCGGGC
CTCGGTCTGGACCGGCCGGCCGCCTCCTGGCCCTCGCGGCTGCCCGGTGCGGTGCACGTGGCCGGGTTCTCCGGCTCCGG
TTTCAGCGTGCACGCGAGCGCCTGCGCCGGGGTCTCGTTCGCCGACCGGGCGCCGGCCGCCCTGCGCGGCGGCGCCGACC
TCGTGGTGGTCGAGGGCGGGCTGAACGACTACGACCGGCCCGACAGCGAGATCCGGGCCGGGTTCGCGCGGCTGATGACC
GCCCTGGACGGGCAGCGGGTGGTCGTGGTCGGCCCGGCCAGCGCGCCGTCCCGCGCGGCCGCCGTACCCCACGTCGACGC
GCTGCTCGCCTCCCTCTCCGACTGGTACGGCGTCCCCTACATCCGCACGTCCGGCCTCCGGCTGGACTACCTCGGCGACC
GTCTCCACCTCACCCTCGCCGGCCACGACGCCTTCGGCGACTACGTCGCCTCGCGGCTCGCCCGCCTGCCCTCCTGA

Upstream 100 bases:

>100_bases
TACTCACTCATCCGACCAGCCTGCCAGGGTTTCTTGCAGGTTCATCACGGGTTGGCAACATCCCGGGCGGGCGGTCGCGC
CGCGACGCATCATTGCTCGC

Downstream 100 bases:

>100_bases
GCTGTAACGCCCGTTTACCCTGCCCTCCCACCGTGCTGCAACATCCCGGGTAGATCGGGTAACAGGGCGTTACAGCGTTC
GGCGCCGGGCGGTTGGCGCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 238; Mature: 238

Protein sequence:

>238_residues
MVLRGVASPGSRRSVRRRTAAIGALLVFLLASALILRVADRAGADADRCRAFTADSVARAAQVSGSGDRVVVIGDSWSAG
LGLDRPAASWPSRLPGAVHVAGFSGSGFSVHASACAGVSFADRAPAALRGGADLVVVEGGLNDYDRPDSEIRAGFARLMT
ALDGQRVVVVGPASAPSRAAAVPHVDALLASLSDWYGVPYIRTSGLRLDYLGDRLHLTLAGHDAFGDYVASRLARLPS

Sequences:

>Translated_238_residues
MVLRGVASPGSRRSVRRRTAAIGALLVFLLASALILRVADRAGADADRCRAFTADSVARAAQVSGSGDRVVVIGDSWSAG
LGLDRPAASWPSRLPGAVHVAGFSGSGFSVHASACAGVSFADRAPAALRGGADLVVVEGGLNDYDRPDSEIRAGFARLMT
ALDGQRVVVVGPASAPSRAAAVPHVDALLASLSDWYGVPYIRTSGLRLDYLGDRLHLTLAGHDAFGDYVASRLARLPS
>Mature_238_residues
MVLRGVASPGSRRSVRRRTAAIGALLVFLLASALILRVADRAGADADRCRAFTADSVARAAQVSGSGDRVVVIGDSWSAG
LGLDRPAASWPSRLPGAVHVAGFSGSGFSVHASACAGVSFADRAPAALRGGADLVVVEGGLNDYDRPDSEIRAGFARLMT
ALDGQRVVVVGPASAPSRAAAVPHVDALLASLSDWYGVPYIRTSGLRLDYLGDRLHLTLAGHDAFGDYVASRLARLPS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24572; Mature: 24572

Theoretical pI: Translated: 9.94; Mature: 9.94

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVLRGVASPGSRRSVRRRTAAIGALLVFLLASALILRVADRAGADADRCRAFTADSVARA
CEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCHHHHHHH
AQVSGSGDRVVVIGDSWSAGLGLDRPAASWPSRLPGAVHVAGFSGSGFSVHASACAGVSF
HHCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCEEEHHHHCCCCC
ADRAPAALRGGADLVVVEGGLNDYDRPDSEIRAGFARLMTALDGQRVVVVGPASAPSRAA
CCCCCHHHCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCC
AVPHVDALLASLSDWYGVPYIRTSGLRLDYLGDRLHLTLAGHDAFGDYVASRLARLPS
CCCHHHHHHHHHHHHCCCCEEEECCEEEEECCCEEEEEEECCCHHHHHHHHHHHHCCC
>Mature Secondary Structure
MVLRGVASPGSRRSVRRRTAAIGALLVFLLASALILRVADRAGADADRCRAFTADSVARA
CEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCHHHHHHH
AQVSGSGDRVVVIGDSWSAGLGLDRPAASWPSRLPGAVHVAGFSGSGFSVHASACAGVSF
HHCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCEEEHHHHCCCCC
ADRAPAALRGGADLVVVEGGLNDYDRPDSEIRAGFARLMTALDGQRVVVVGPASAPSRAA
CCCCCHHHCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCC
AVPHVDALLASLSDWYGVPYIRTSGLRLDYLGDRLHLTLAGHDAFGDYVASRLARLPS
CCCHHHHHHHHHHHHCCCCEEEECCEEEEECCCEEEEEEECCCHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA