| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is dksA [C]
Identifier: 119717974
GI number: 119717974
Start: 3971291
End: 3971623
Strand: Reverse
Name: dksA [C]
Synonym: Noca_3752
Alternate gene names: 119717974
Gene position: 3971623-3971291 (Counterclockwise)
Preceding gene: 119717975
Following gene: 119717972
Centisome position: 79.66
GC content: 76.28
Gene sequence:
>333_bases GTGACCGGCCCACGCGGGCGGCTCGACGAGGAGCGTCGCCGTACGACGGCCCGGCTGGCGGAACTCCGCGGGGAGTACCG CGGGTTCGTCGACGCCTCGCGCGACACCAACGCCGACGACGAGCACGACCCGGAGGGGGCGACGATCGCCTTCGAGCGCG AGCAGGTCGGCGCCCTGGTGCGCCGAGCCGAGCAGCGGCTGACCGAGGTCGCAGACGCGCTGGCCCGCCTCGACGACGGG ACCTACGGGGCATGCGCCCGGTGCGGAGCACCGATCGCCGCCGAGCGCCTCGACGTGCGGCCCACCGCGACGACCTGCGT CGGCTGCGCCTGA
Upstream 100 bases:
>100_bases ACCTGGACGCGATGCCCTCGCTGCGCCCGGTGCGCGCGCAGCTGCTCGACATGTTCCCGAACACCGCGCACTACGAGGTC CTCGCGCTGCTGGAGCGGTT
Downstream 100 bases:
>100_bases GCCGGGCCGGGCCGGGCTGGGCCGGGCCGGGCCGGGCCGCGGGCTACTTCGCGGGCAGGGTGCGGGCGTAGCCGGCACCG ACCTCGGCCCAGCGCTCGAG
Product: putative suppressor protein DnaK
Products: NA
Alternate protein names: TraR/DksA Family Transcriptional Regulator; Suppressor Protein DNAK; DNAK Suppressor Protein; Dksa/Trar Family Transcriptional Regulator
Number of amino acids: Translated: 110; Mature: 109
Protein sequence:
>110_residues MTGPRGRLDEERRRTTARLAELRGEYRGFVDASRDTNADDEHDPEGATIAFEREQVGALVRRAEQRLTEVADALARLDDG TYGACARCGAPIAAERLDVRPTATTCVGCA
Sequences:
>Translated_110_residues MTGPRGRLDEERRRTTARLAELRGEYRGFVDASRDTNADDEHDPEGATIAFEREQVGALVRRAEQRLTEVADALARLDDG TYGACARCGAPIAAERLDVRPTATTCVGCA >Mature_109_residues TGPRGRLDEERRRTTARLAELRGEYRGFVDASRDTNADDEHDPEGATIAFEREQVGALVRRAEQRLTEVADALARLDDGT YGACARCGAPIAAERLDVRPTATTCVGCA
Specific function: Dosage-Dependent Suppressor Of A Dnak Deletion Mutation. It Suppressed Not Only The Temperature-Sensitive Growth But Also The Filamentous Phenotype Of The Dnak Deletion Strain, While The Defect Of Lambda Growth Is Not Suppressed. [C]
COG id: COG1734
COG function: function code T; DnaK suppressor protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11979; Mature: 11848
Theoretical pI: Translated: 4.80; Mature: 4.80
Prosite motif: PS51128 ZF_DKSA_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.6 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 3.7 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTGPRGRLDEERRRTTARLAELRGEYRGFVDASRDTNADDEHDPEGATIAFEREQVGALV CCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEECHHHHHHHH RRAEQRLTEVADALARLDDGTYGACARCGAPIAAERLDVRPTATTCVGCA HHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCHHHHCCCCCCCCCCCCCC >Mature Secondary Structure TGPRGRLDEERRRTTARLAELRGEYRGFVDASRDTNADDEHDPEGATIAFEREQVGALV CCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEECHHHHHHHH RRAEQRLTEVADALARLDDGTYGACARCGAPIAAERLDVRPTATTCVGCA HHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCHHHHCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA