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The map label for this gene is sgcQ [H]

Identifier: 119717908

GI number: 119717908

Start: 3909391

End: 3910209

Strand: Reverse

Name: sgcQ [H]

Synonym: Noca_3686

Alternate gene names: 119717908

Gene position: 3910209-3909391 (Counterclockwise)

Preceding gene: 119717910

Following gene: 119717907

Centisome position: 78.43

GC content: 64.96

Gene sequence:

>819_bases
ATGCAGTGGTTGAAGGAGACCTTCGGCGTCGACAGGCCGATCATCGCCATGCTCCACCTCAAGCCGCTGCCGGGGGACCC
GCACTATGACGCGACCACCGGCATGGCGGCCGTGCTCCGTGCGGCAGGGGAGGATCTGCGTGCGCTCCAGGACGGTGGTG
TGGACGCGGTGATGTTCTCCAACGAGTTCTCGCTCCCCTATCTGACCAAGACCGAGCCCATCACCGCGATCTCGATGGCA
CGCATCATCGGTGAGCTCGCCAGCGACATTCGTGTCCCGTTCGGCGTGAACGTGCTCTGGGACGGCCCGGCCAGCATCGA
TCTGGCTGCTGCGACGGGTGCACAGTTCGTGCGCGAGATCTTCTCGGGCGTCTACGCCTCGGACTTCGGACTTTGGAACA
CCAACGTCGGGCTGTCGGCCCGGCGTCAACGCCAGCACGACGCCATGGGAGTGCGACTGCTGTTCAACATCGTCCCGGAA
GCAGCGCAGTACCTGGCACACCGAGACCTGGCGAGTATCGCTCGCACGACCGTCTTCAACTGCGCGCCTGACGGATTGTG
TGTCTCCGGAGCCACCGCGGGTGCGGCGACAGACACCGATCAACTTCGGGTGGTGAAGCAGGCTGCTGGTGACACGCCGG
TGTTCGTCAACACTGGCGTGCGGGTCGCCACCCTCGAGACACAGTTGAGCGCCGCAGACGGTGCGATCGTCGGGACCGCC
TTCAAGTACGACGGGATCTTCGAGAACCAGGTCGACGTCAGCCGGGTGACCGAGTTCATGGTCGAGGCACGGCGCGTCCG
CGACCTGGTTGACGCCTGA

Upstream 100 bases:

>100_bases
CGGTGATTCTGAGATTTTTTGACCTCAACCCTAGTCAAGACCACATCGAACCCCTACTGTTCGTGAAAGATTCACGTTCG
AGTGTGATTGGAGAACATTC

Downstream 100 bases:

>100_bases
GATCGTGACCGTCATGCCCAGGACCGAAGGCCGCTCACTCTCTATTGGCGACGAAGTGACCGTCGGCGTCGACATCGGCT
CGAGTGGCGTGAAGGTCCTC

Product: photosystem I assembly BtpA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 272; Mature: 272

Protein sequence:

>272_residues
MQWLKETFGVDRPIIAMLHLKPLPGDPHYDATTGMAAVLRAAGEDLRALQDGGVDAVMFSNEFSLPYLTKTEPITAISMA
RIIGELASDIRVPFGVNVLWDGPASIDLAAATGAQFVREIFSGVYASDFGLWNTNVGLSARRQRQHDAMGVRLLFNIVPE
AAQYLAHRDLASIARTTVFNCAPDGLCVSGATAGAATDTDQLRVVKQAAGDTPVFVNTGVRVATLETQLSAADGAIVGTA
FKYDGIFENQVDVSRVTEFMVEARRVRDLVDA

Sequences:

>Translated_272_residues
MQWLKETFGVDRPIIAMLHLKPLPGDPHYDATTGMAAVLRAAGEDLRALQDGGVDAVMFSNEFSLPYLTKTEPITAISMA
RIIGELASDIRVPFGVNVLWDGPASIDLAAATGAQFVREIFSGVYASDFGLWNTNVGLSARRQRQHDAMGVRLLFNIVPE
AAQYLAHRDLASIARTTVFNCAPDGLCVSGATAGAATDTDQLRVVKQAAGDTPVFVNTGVRVATLETQLSAADGAIVGTA
FKYDGIFENQVDVSRVTEFMVEARRVRDLVDA
>Mature_272_residues
MQWLKETFGVDRPIIAMLHLKPLPGDPHYDATTGMAAVLRAAGEDLRALQDGGVDAVMFSNEFSLPYLTKTEPITAISMA
RIIGELASDIRVPFGVNVLWDGPASIDLAAATGAQFVREIFSGVYASDFGLWNTNVGLSARRQRQHDAMGVRLLFNIVPE
AAQYLAHRDLASIARTTVFNCAPDGLCVSGATAGAATDTDQLRVVKQAAGDTPVFVNTGVRVATLETQLSAADGAIVGTA
FKYDGIFENQVDVSRVTEFMVEARRVRDLVDA

Specific function: Unknown

COG id: COG0434

COG function: function code R; Predicted TIM-barrel enzyme

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the BtpA family [H]

Homologues:

Organism=Escherichia coli, GI1790757, Length=267, Percent_Identity=60.2996254681648, Blast_Score=330, Evalue=4e-92,
Organism=Caenorhabditis elegans, GI115532828, Length=260, Percent_Identity=26.9230769230769, Blast_Score=77, Evalue=1e-14,
Organism=Drosophila melanogaster, GI24659916, Length=265, Percent_Identity=24.9056603773585, Blast_Score=65, Evalue=5e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR005137
- InterPro:   IPR011060
- ProDom:   PD011184 [H]

Pfam domain/function: PF03437 BtpA [H]

EC number: NA

Molecular weight: Translated: 29203; Mature: 29203

Theoretical pI: Translated: 4.71; Mature: 4.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQWLKETFGVDRPIIAMLHLKPLPGDPHYDATTGMAAVLRAAGEDLRALQDGGVDAVMFS
CCHHHHHHCCCCCEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEC
NEFSLPYLTKTEPITAISMARIIGELASDIRVPFGVNVLWDGPASIDLAAATGAQFVREI
CCCCCCEECCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCEEEHHHHHHHHHHHH
FSGVYASDFGLWNTNVGLSARRQRQHDAMGVRLLFNIVPEAAQYLAHRDLASIARTTVFN
HHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
CAPDGLCVSGATAGAATDTDQLRVVKQAAGDTPVFVNTGVRVATLETQLSAADGAIVGTA
CCCCCEEECCCCCCCCCCHHHHHHHHHHCCCCCEEEECCEEEEEEEHHHHCCCCCEEEEE
FKYDGIFENQVDVSRVTEFMVEARRVRDLVDA
EEECCCCCCCCCHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MQWLKETFGVDRPIIAMLHLKPLPGDPHYDATTGMAAVLRAAGEDLRALQDGGVDAVMFS
CCHHHHHHCCCCCEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEC
NEFSLPYLTKTEPITAISMARIIGELASDIRVPFGVNVLWDGPASIDLAAATGAQFVREI
CCCCCCEECCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCEEEHHHHHHHHHHHH
FSGVYASDFGLWNTNVGLSARRQRQHDAMGVRLLFNIVPEAAQYLAHRDLASIARTTVFN
HHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
CAPDGLCVSGATAGAATDTDQLRVVKQAAGDTPVFVNTGVRVATLETQLSAADGAIVGTA
CCCCCEEECCCCCCCCCCHHHHHHHHHHCCCCCEEEECCEEEEEEEHHHHCCCCCEEEEE
FKYDGIFENQVDVSRVTEFMVEARRVRDLVDA
EEECCCCCCCCCHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7610040; 9278503 [H]