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The map label for this gene is xylB [H]

Identifier: 119717907

GI number: 119717907

Start: 3907845

End: 3909377

Strand: Reverse

Name: xylB [H]

Synonym: Noca_3685

Alternate gene names: 119717907

Gene position: 3909377-3907845 (Counterclockwise)

Preceding gene: 119717908

Following gene: 119717906

Centisome position: 78.41

GC content: 68.3

Gene sequence:

>1533_bases
ATGCCCAGGACCGAAGGCCGCTCACTCTCTATTGGCGACGAAGTGACCGTCGGCGTCGACATCGGCTCGAGTGGCGTGAA
GGTCCTCGCGCACTCTCGCGTGCGCGGGGTTCTTGCCACCGCCTCGGTGCCGGTTGAGCTCTACTCGCCGGAGCCCGGGT
GGGCCGAGGCCGACCCCGAGGAGTGGTGGGAAGCCACCTGCCGCGCGACTCGGCAGGTTGTGCACGACCTGCCCGAGGGC
CTTCCGGTGAGCGTCGTCGCGGTTTCCGGCATGGTCCCGGCCGTGGTGTGCGTCGACGCACGAGGAGGCTCCCTCGGCCC
TGCCATGCTGCAGAACGATGCGCGCGCGACCCGCGAGATCGCCGAGCTTGCTCGCGAGCTGGCCGGTATCGACCTGCTCG
AGCGCACCGGCTCGGTACTCAGCCAGCAATCGGTTGCACCCTCTGTGCGGTGGCTGCAACGTCACGAACCTGATCGTTGG
GCGAAGACCCGGTGGGTGGTCGGCTCCTACGACTACGTCGCCATGCGGATGGGCGCATCACCACATGTGGAGTTGAACTG
GGCGATCGAAAGTGGCTTGTACGACCTTGCCGGGGAGCCTGTTGCCGCGGTGTGGGACGCGGTGCGTCTGGATGCCGACC
GCGTTCCAGCGCTCCATCGGCCGGGCGACGCGGTCGGCACCCTCTCGGCCAGCGCCGCAGCGGACCTGGGTCTGCGGGGA
GGAACCACCATCGTCGTCGGCGGGGCCGATCACGTGATGTCGGCCTATGCCGCGGGGCTTGCCGAGGAAGGAGATGTGCT
GGTCAAGCTCGGTGGCGCCGGTGACATCCTCGCGGTCGCCAACGGCCCGGTGCTCGACTCTCGTCTCTACCTCGACGCCC
ATCCCATCCCCAACCGATGGCTGCCCAATGGTTGCATGGCCACCAGCGGGTCGATGCTGCGGTGGTTGCAGACCATCCAC
GGCAGGCAGGACCTAGAACAGCTCGACCAAGAGGCGACGGGTAGGCCGGCTGCCGCGCTCGTGGCGCTGCCCTATCTCCT
CGGAGAGAAGACGCCGCACCACGATCCGTGGCTGCGTGGCGCGTTCCTGGGCGTCCACCTGGGGACGACCGCCGCGGACT
TGCATCGGGCGGCCCTGGAGGCCATCGCGTACGGATTCCGCCAGCACGTCGAGGTCCTCCGGGAGGCGGGGGTGGCAGTG
ACCACGGTGCGGGTCACCAATGGCGGGTCGCGGTCCGTGTTGTGGAAGCAGGTCCTGGCCGACGTTCTCAACATGCCGCT
GATCCCCGTGCGTGACCATCCGGGGGCTTCGCTCGGTGCCGCGCTCGCCGGATCCGTACAAGGCCCTGACGACTGGGTGC
GGGCAGCCGCCGGCATCCAGTACGACACGCCGATTGAGCCCGACGGTGATCGGACTCGAAGATACGCCGACGCGTATCAG
ATCTTCTTGGACCTGCAGGAGCAGGTGAATCCGCTCGCCAGACGGCTTGCTCGCCTGGGCGCCGACGAGGACACAACGGA
GAGGACCGGATGA

Upstream 100 bases:

>100_bases
GGGATCTTCGAGAACCAGGTCGACGTCAGCCGGGTGACCGAGTTCATGGTCGAGGCACGGCGCGTCCGCGACCTGGTTGA
CGCCTGAGATCGTGACCGTC

Downstream 100 bases:

>100_bases
TGGACACGCTCGAGGAGGTGGCTGTCGTCACCGGCGCCGGATCTGGCATTGGGGCTGCGATCGGTCGCGAGCTCGCCAGC
CGGGGCTACCGGGTGGTGTT

Product: carbohydrate kinase

Products: ADP; D-xylulose 5-phosphate

Alternate protein names: NA

Number of amino acids: Translated: 510; Mature: 509

Protein sequence:

>510_residues
MPRTEGRSLSIGDEVTVGVDIGSSGVKVLAHSRVRGVLATASVPVELYSPEPGWAEADPEEWWEATCRATRQVVHDLPEG
LPVSVVAVSGMVPAVVCVDARGGSLGPAMLQNDARATREIAELARELAGIDLLERTGSVLSQQSVAPSVRWLQRHEPDRW
AKTRWVVGSYDYVAMRMGASPHVELNWAIESGLYDLAGEPVAAVWDAVRLDADRVPALHRPGDAVGTLSASAAADLGLRG
GTTIVVGGADHVMSAYAAGLAEEGDVLVKLGGAGDILAVANGPVLDSRLYLDAHPIPNRWLPNGCMATSGSMLRWLQTIH
GRQDLEQLDQEATGRPAAALVALPYLLGEKTPHHDPWLRGAFLGVHLGTTAADLHRAALEAIAYGFRQHVEVLREAGVAV
TTVRVTNGGSRSVLWKQVLADVLNMPLIPVRDHPGASLGAALAGSVQGPDDWVRAAAGIQYDTPIEPDGDRTRRYADAYQ
IFLDLQEQVNPLARRLARLGADEDTTERTG

Sequences:

>Translated_510_residues
MPRTEGRSLSIGDEVTVGVDIGSSGVKVLAHSRVRGVLATASVPVELYSPEPGWAEADPEEWWEATCRATRQVVHDLPEG
LPVSVVAVSGMVPAVVCVDARGGSLGPAMLQNDARATREIAELARELAGIDLLERTGSVLSQQSVAPSVRWLQRHEPDRW
AKTRWVVGSYDYVAMRMGASPHVELNWAIESGLYDLAGEPVAAVWDAVRLDADRVPALHRPGDAVGTLSASAAADLGLRG
GTTIVVGGADHVMSAYAAGLAEEGDVLVKLGGAGDILAVANGPVLDSRLYLDAHPIPNRWLPNGCMATSGSMLRWLQTIH
GRQDLEQLDQEATGRPAAALVALPYLLGEKTPHHDPWLRGAFLGVHLGTTAADLHRAALEAIAYGFRQHVEVLREAGVAV
TTVRVTNGGSRSVLWKQVLADVLNMPLIPVRDHPGASLGAALAGSVQGPDDWVRAAAGIQYDTPIEPDGDRTRRYADAYQ
IFLDLQEQVNPLARRLARLGADEDTTERTG
>Mature_509_residues
PRTEGRSLSIGDEVTVGVDIGSSGVKVLAHSRVRGVLATASVPVELYSPEPGWAEADPEEWWEATCRATRQVVHDLPEGL
PVSVVAVSGMVPAVVCVDARGGSLGPAMLQNDARATREIAELARELAGIDLLERTGSVLSQQSVAPSVRWLQRHEPDRWA
KTRWVVGSYDYVAMRMGASPHVELNWAIESGLYDLAGEPVAAVWDAVRLDADRVPALHRPGDAVGTLSASAAADLGLRGG
TTIVVGGADHVMSAYAAGLAEEGDVLVKLGGAGDILAVANGPVLDSRLYLDAHPIPNRWLPNGCMATSGSMLRWLQTIHG
RQDLEQLDQEATGRPAAALVALPYLLGEKTPHHDPWLRGAFLGVHLGTTAADLHRAALEAIAYGFRQHVEVLREAGVAVT
TVRVTNGGSRSVLWKQVLADVLNMPLIPVRDHPGASLGAALAGSVQGPDDWVRAAAGIQYDTPIEPDGDRTRRYADAYQI
FLDLQEQVNPLARRLARLGADEDTTERTG

Specific function: Unknown

COG id: COG1070

COG function: function code G; Sugar (pentulose and hexulose) kinases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the FGGY kinase family [H]

Homologues:

Organism=Homo sapiens, GI164663828, Length=544, Percent_Identity=23.5294117647059, Blast_Score=89, Evalue=9e-18,
Organism=Escherichia coli, GI1789987, Length=491, Percent_Identity=29.1242362525458, Blast_Score=176, Evalue=4e-45,
Organism=Escherichia coli, GI1790005, Length=444, Percent_Identity=27.2522522522523, Blast_Score=132, Evalue=6e-32,
Organism=Escherichia coli, GI1787789, Length=459, Percent_Identity=24.8366013071895, Blast_Score=91, Evalue=2e-19,
Organism=Escherichia coli, GI1789138, Length=511, Percent_Identity=22.8962818003914, Blast_Score=68, Evalue=2e-12,
Organism=Escherichia coli, GI1790361, Length=466, Percent_Identity=21.4592274678112, Blast_Score=66, Evalue=5e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000577
- InterPro:   IPR018485
- InterPro:   IPR018483
- InterPro:   IPR018484
- InterPro:   IPR006000 [H]

Pfam domain/function: PF02782 FGGY_C; PF00370 FGGY_N [H]

EC number: 2.7.1.17

Molecular weight: Translated: 54378; Mature: 54247

Theoretical pI: Translated: 5.03; Mature: 5.03

Prosite motif: PS00445 FGGY_KINASES_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPRTEGRSLSIGDEVTVGVDIGSSGVKVLAHSRVRGVLATASVPVELYSPEPGWAEADPE
CCCCCCCEEECCCCEEEEEEECCCCHHHHHHHHHHHEEEECCCCEEEECCCCCCCCCCHH
EWWEATCRATRQVVHDLPEGLPVSVVAVSGMVPAVVCVDARGGSLGPAMLQNDARATREI
HHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCEEEEEECCCCCCCHHHHHHHHHHHHHH
AELARELAGIDLLERTGSVLSQQSVAPSVRWLQRHEPDRWAKTRWVVGSYDYVAMRMGAS
HHHHHHHHCHHHHHHHHHHHHHHHCCHHHHHHHHCCCCHHHHCEEEECCCCEEEEECCCC
PHVELNWAIESGLYDLAGEPVAAVWDAVRLDADRVPALHRPGDAVGTLSASAAADLGLRG
CCEEEEEEECCCCHHHCCCCHHHHHHHHHCCHHCCCCCCCCCCCHHCCCHHHHHHCCCCC
GTTIVVGGADHVMSAYAAGLAEEGDVLVKLGGAGDILAVANGPVLDSRLYLDAHPIPNRW
CCEEEECCHHHHHHHHHHCCCCCCCEEEEECCCCCEEEEECCCEECCEEEEECCCCCCCC
LPNGCMATSGSMLRWLQTIHGRQDLEQLDQEATGRPAAALVALPYLLGEKTPHHDPWLRG
CCCCCCCCCHHHHHHHHHHHCHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCHHH
AFLGVHLGTTAADLHRAALEAIAYGFRQHVEVLREAGVAVTTVRVTNGGSRSVLWKQVLA
EEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCHHHHHHHHHH
DVLNMPLIPVRDHPGASLGAALAGSVQGPDDWVRAAAGIQYDTPIEPDGDRTRRYADAYQ
HHHCCCEEEECCCCCCHHHHHHHCCCCCHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHH
IFLDLQEQVNPLARRLARLGADEDTTERTG
HHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure 
PRTEGRSLSIGDEVTVGVDIGSSGVKVLAHSRVRGVLATASVPVELYSPEPGWAEADPE
CCCCCCEEECCCCEEEEEEECCCCHHHHHHHHHHHEEEECCCCEEEECCCCCCCCCCHH
EWWEATCRATRQVVHDLPEGLPVSVVAVSGMVPAVVCVDARGGSLGPAMLQNDARATREI
HHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCEEEEEECCCCCCCHHHHHHHHHHHHHH
AELARELAGIDLLERTGSVLSQQSVAPSVRWLQRHEPDRWAKTRWVVGSYDYVAMRMGAS
HHHHHHHHCHHHHHHHHHHHHHHHCCHHHHHHHHCCCCHHHHCEEEECCCCEEEEECCCC
PHVELNWAIESGLYDLAGEPVAAVWDAVRLDADRVPALHRPGDAVGTLSASAAADLGLRG
CCEEEEEEECCCCHHHCCCCHHHHHHHHHCCHHCCCCCCCCCCCHHCCCHHHHHHCCCCC
GTTIVVGGADHVMSAYAAGLAEEGDVLVKLGGAGDILAVANGPVLDSRLYLDAHPIPNRW
CCEEEECCHHHHHHHHHHCCCCCCCEEEEECCCCCEEEEECCCEECCEEEEECCCCCCCC
LPNGCMATSGSMLRWLQTIHGRQDLEQLDQEATGRPAAALVALPYLLGEKTPHHDPWLRG
CCCCCCCCCHHHHHHHHHHHCHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCHHH
AFLGVHLGTTAADLHRAALEAIAYGFRQHVEVLREAGVAVTTVRVTNGGSRSVLWKQVLA
EEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCHHHHHHHHHH
DVLNMPLIPVRDHPGASLGAALAGSVQGPDDWVRAAAGIQYDTPIEPDGDRTRRYADAYQ
HHHCCCEEEECCCCCCHHHHHHHCCCCCHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHH
IFLDLQEQVNPLARRLARLGADEDTTERTG
HHHHHHHHHHHHHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; D-xylulose

Specific reaction: ATP + D-xylulose = ADP + D-xylulose 5-phosphate

General reaction: Phospho group transfer [C]

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA