| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
Click here to switch to the map view.
The map label for this gene is rimI [C]
Identifier: 119717884
GI number: 119717884
Start: 3886116
End: 3886592
Strand: Reverse
Name: rimI [C]
Synonym: Noca_3662
Alternate gene names: 119717884
Gene position: 3886592-3886116 (Counterclockwise)
Preceding gene: 119717885
Following gene: 119717883
Centisome position: 77.95
GC content: 77.15
Gene sequence:
>477_bases GTGACCGTCCGCCCGGCGACCGCCGAGGACGCCGCGGCGATCGCCGCCCTCGAGCGGGACAACCTCGGCGCCGACGCCTG GTCGCCCGCGCTCGTCCAGGAGGGTGTCGCCGGCAACCTGCCGACCGTCGCCTACCTGGTCGCCGAGGTGGACGGCGATG CCGGGCCGCAGGTCGTGGGGCACGCGGCCACCAGCGTGGTCGCTGACATCGCCGAGCTCCAGCGGATCGCGGTCGATCCC GCCCATCGGCGTACCGGTGTGGCGACCGAGCTCCTCGACGCGGCGGTCGCGGCCGCCCGGGCGGGCGGCGCCGACCGGCT GCTGCTGGAGGTGCGCGAGGACAACGCGGGCGCGCTGGCCTTCTACGCCGCCCGGGGCTTCGTCGAGGTCGACCGGCGCC GCCGCTACTACCGCGACGGCGCCACCGCTGTCGTCCTGCGCCTGGGCCTCGGCCCGGCGTGCTCCTACGGCAGGTAG
Upstream 100 bases:
>100_bases CGCGGGTCGTGACCGACGAGCGCGCCGAGCTGTGCGACCCCGAGCCGCTGTACCTGCGGCGTCCCGACGCGGCGACCCCG CACGCGCCGAAGCGCGTGTC
Downstream 100 bases:
>100_bases CTCCTACGGCAGGTAGCTCCTACGGCAGGTAGTACGTCGGGTCGGGGAGCTTCACGGCCCGGTCGGACGAGCCGCCGATC AGGTCGCCGTACTCACCTCT
Product: 30S ribosomal protein S18P alanine acetyltransferase
Products: CoA; ribosomal-protein N-acetyl-L-alanine
Alternate protein names: NA
Number of amino acids: Translated: 158; Mature: 157
Protein sequence:
>158_residues MTVRPATAEDAAAIAALERDNLGADAWSPALVQEGVAGNLPTVAYLVAEVDGDAGPQVVGHAATSVVADIAELQRIAVDP AHRRTGVATELLDAAVAAARAGGADRLLLEVREDNAGALAFYAARGFVEVDRRRRYYRDGATAVVLRLGLGPACSYGR
Sequences:
>Translated_158_residues MTVRPATAEDAAAIAALERDNLGADAWSPALVQEGVAGNLPTVAYLVAEVDGDAGPQVVGHAATSVVADIAELQRIAVDP AHRRTGVATELLDAAVAAARAGGADRLLLEVREDNAGALAFYAARGFVEVDRRRRYYRDGATAVVLRLGLGPACSYGR >Mature_157_residues TVRPATAEDAAAIAALERDNLGADAWSPALVQEGVAGNLPTVAYLVAEVDGDAGPQVVGHAATSVVADIAELQRIAVDPA HRRTGVATELLDAAVAAARAGGADRLLLEVREDNAGALAFYAARGFVEVDRRRRYYRDGATAVVLRLGLGPACSYGR
Specific function: This Enzyme Acetylates The N-Terminal Alanine Of Ribosomal Protein S18. [C]
COG id: COG0456
COG function: function code R; Acetyltransferases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 2.3.1.128
Molecular weight: Translated: 16380; Mature: 16248
Theoretical pI: Translated: 4.78; Mature: 4.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTVRPATAEDAAAIAALERDNLGADAWSPALVQEGVAGNLPTVAYLVAEVDGDAGPQVVG CCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHCCCCCCCCHHHHEEEECCCCCCCHHHH HAATSVVADIAELQRIAVDPAHRRTGVATELLDAAVAAARAGGADRLLLEVREDNAGALA HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCEEE FYAARGFVEVDRRRRYYRDGATAVVLRLGLGPACSYGR EEECCCHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCC >Mature Secondary Structure TVRPATAEDAAAIAALERDNLGADAWSPALVQEGVAGNLPTVAYLVAEVDGDAGPQVVG CCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHCCCCCCCCHHHHEEEECCCCCCCHHHH HAATSVVADIAELQRIAVDPAHRRTGVATELLDAAVAAARAGGADRLLLEVREDNAGALA HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCEEE FYAARGFVEVDRRRRYYRDGATAVVLRLGLGPACSYGR EEECCCHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: acetyl-CoA; ribosomal-protein L-alanine
Specific reaction: acetyl-CoA + ribosomal-protein L-alanine = CoA + ribosomal-protein N-acetyl-L-alanine
General reaction: Acyl group transfer [C]
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA