Definition Nocardioides sp. JS614 chromosome, complete genome.
Accession NC_008699
Length 4,985,871

Click here to switch to the map view.

The map label for this gene is 119717883

Identifier: 119717883

GI number: 119717883

Start: 3885716

End: 3885961

Strand: Reverse

Name: 119717883

Synonym: Noca_3661

Alternate gene names: NA

Gene position: 3885961-3885716 (Counterclockwise)

Preceding gene: 119717884

Following gene: 119717882

Centisome position: 77.94

GC content: 66.26

Gene sequence:

>246_bases
ATGCGGCAGATCCGCGCGATACCACTTTGGTATCATCGCGGGATGGCCATGACTTTGCGATTGAGTTCAGAGGACGAGCG
TCTCCTGGCCGCGCTGGCGGAGGCTGAGGGGGTGAGTCGACACGAGGCGACCCTGCGCGCGATCCGTGAGGCGGCCTCTC
GCCATGCGCACCAGGCCAAGGTGGCCGACCTGTCTGCCCGGGCTCGTGAGCGCTATGCAGACGTACTGGACCGGCTCGGC
CGTTGA

Upstream 100 bases:

>100_bases
CGGCCCGGTCGGACGAGCCGCCGATCAGGTCGCCGTACTCACCTCTCGCGTGCTCAGGTGGCAGGCGCACACTCCGTGCC
GCAGCGTGACCTCGCACGGA

Downstream 100 bases:

>100_bases
CGGTTCTGCTCACGGTCGAGGATCTCCTGTCCCTCGTGGCGGACCTCGGGGTCGGACCGGTGCGCGACGTGGGTCTGCTG
GACTCGGCAGCTCATCGGCC

Product: CopG/DNA-binding domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 81; Mature: 81

Protein sequence:

>81_residues
MRQIRAIPLWYHRGMAMTLRLSSEDERLLAALAEAEGVSRHEATLRAIREAASRHAHQAKVADLSARARERYADVLDRLG
R

Sequences:

>Translated_81_residues
MRQIRAIPLWYHRGMAMTLRLSSEDERLLAALAEAEGVSRHEATLRAIREAASRHAHQAKVADLSARARERYADVLDRLG
R
>Mature_81_residues
MRQIRAIPLWYHRGMAMTLRLSSEDERLLAALAEAEGVSRHEATLRAIREAASRHAHQAKVADLSARARERYADVLDRLG
R

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 9220; Mature: 9220

Theoretical pI: Translated: 11.09; Mature: 11.09

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRQIRAIPLWYHRGMAMTLRLSSEDERLLAALAEAEGVSRHEATLRAIREAASRHAHQAK
CCCCCCCHHHHHCCEEEEEEECCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH
VADLSARARERYADVLDRLGR
HHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MRQIRAIPLWYHRGMAMTLRLSSEDERLLAALAEAEGVSRHEATLRAIREAASRHAHQAK
CCCCCCCHHHHHCCEEEEEEECCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH
VADLSARARERYADVLDRLGR
HHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA