| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is guaB [H]
Identifier: 119717867
GI number: 119717867
Start: 3868895
End: 3870397
Strand: Reverse
Name: guaB [H]
Synonym: Noca_3645
Alternate gene names: 119717867
Gene position: 3870397-3868895 (Counterclockwise)
Preceding gene: 119717868
Following gene: 119717863
Centisome position: 77.63
GC content: 70.19
Gene sequence:
>1503_bases GTGGAGCTGCCTGAGAAGTTCGCCGCCCTCGGCCTGACCTACGACGACGTCCTGCTGCTGCCGGGTCACTCCGACCTCGC GCCCGCGGACATCGACATGACCTCGCGGCTGACCCGCGAGATCTCGTTGAAGGTCCCGCTCGTGAGCGCCGCGATGGACA CCGTGACCGAGTCGCGGATGGCGATCGCGATGGCGCGCCAGGGCGGCCTGGGCGTGCTGCACCGCAACCTGTCGATCGAG GACCAGGCCTACCAGGTCGACCTGGTCAAGCGGACCCAGACCGGCATCATCTCCAACCCGGTGACGATCGGGCCGGACGC GACCCTCGAGCAGCTCGACCAGCTCGCCGGGGAGTACCGCATCTCCGGCTTCCCGGTCGTCGACGCCGACAACCGCCTGC TCGGCATCATCACCAACCGCGACCTGCGGTTCACCCCCGTCGCGGAGTGGGCCACCACCAAGGTCGACGAGGTGATGACG CCGATGCCGCTGATCACCGCGCCCCCCGACATCTCCCGCGAGGACGCCACCCTGCTGCTGCGCCAGCACAAGCGCGAGCG GCTGCCGCTGGTCGACGCGCAGGGCCGGCTGGCCGGCCTGATCACCGTCAAGGACTTCGTGAAGTCCGAGCAGTTCCCGC ATGCCTCCAAGGACGGCGCGGGGCGACTGATGGTGGGGGCCGCGATCGGCTACTTCGGTGACGCCTGGCAGCGCGCGACC ACGCTCGTGGAGGCCGGTGTGGACGTGCTGGTCGCCGACACCGCCCACGGTCACGTCACGCTGCTGCTCGACATGGTGCG CCGCCTCAAGGCCGACCCGGCCACCCGCCACGTCCAGGTGATCGGCGGCAACGTCGCCACCCGCGACGGCGCGCAGGCCT TCGTCGATGCCGGCGCCGACGCCGTGAAGGTCGGGTTCGGGCCCGGCTCGATCTGCACGACCCGGGTCGTCACCGGCTGC GGCGTACCCCAGATCACTGCCGTGTACGAGGCGTCGCTGGCCTGCCAGCCGGTCGGCGTGCCGGTGATCGCCGACGGCGG GCTGCAGCAGTCGGGCGACATCGCCAAGGCGATCGTTGCCGGCGCCGAGACCGTGATGATCGGCTCGCTGCTGGCCGGCT GCGAGGAGTCGCCCGGCGAGCTGATCTTCGTCAACGGCAAGCAGTACAAGTCCTACCGCGGGATGGGCTCGTTGGCGGCG ATGTCCAGCCGCGGCAAGAAGTCCTACTCCAAGGACCGGTACTTCCAGGCCGAGGTGACCAGCGACGACAAGATCGTGCC CGAGGGGATCGAGGGCCAGGTCGCCTACCGGGGCCCGCTGGCCGCGGTCGCCCACCAGCTGATCGGCGGCCTGAACCAGT CGATGTTCTACATCGGCGCGGCGACGATCCCCGAGCTCCAGGCGAAGGGCCGCTTCGTGCGGATCACCTCGGCCTCGCTC AAGGAGAGCCACCCCCACGACGTCCAGATGACCGTCGAGGCCCCCAACTACTCCGGCCGCTAG
Upstream 100 bases:
>100_bases GACCCTGCGCCGGTTCCACGGCCCCGGCCGTCCCAGGAACGACCGTCTCTCCCCTGAGCCGTGGTGCCGGGCCCGTTCCG GGCGCAGGTAGGCTGTCGGA
Downstream 100 bases:
>100_bases CGACCAAGGATCGCTAGAACGCGTAGCCCACCTGGTTGATCTTCACCCGGGCTCGCTTGGCGAGCTGGACCGTCAATCGG GTGTGGGCCGCGACCGGCAC
Product: inosine-5'-monophosphate dehydrogenase
Products: NA
Alternate protein names: IMP dehydrogenase; IMPD; IMPDH [H]
Number of amino acids: Translated: 500; Mature: 500
Protein sequence:
>500_residues MELPEKFAALGLTYDDVLLLPGHSDLAPADIDMTSRLTREISLKVPLVSAAMDTVTESRMAIAMARQGGLGVLHRNLSIE DQAYQVDLVKRTQTGIISNPVTIGPDATLEQLDQLAGEYRISGFPVVDADNRLLGIITNRDLRFTPVAEWATTKVDEVMT PMPLITAPPDISREDATLLLRQHKRERLPLVDAQGRLAGLITVKDFVKSEQFPHASKDGAGRLMVGAAIGYFGDAWQRAT TLVEAGVDVLVADTAHGHVTLLLDMVRRLKADPATRHVQVIGGNVATRDGAQAFVDAGADAVKVGFGPGSICTTRVVTGC GVPQITAVYEASLACQPVGVPVIADGGLQQSGDIAKAIVAGAETVMIGSLLAGCEESPGELIFVNGKQYKSYRGMGSLAA MSSRGKKSYSKDRYFQAEVTSDDKIVPEGIEGQVAYRGPLAAVAHQLIGGLNQSMFYIGAATIPELQAKGRFVRITSASL KESHPHDVQMTVEAPNYSGR
Sequences:
>Translated_500_residues MELPEKFAALGLTYDDVLLLPGHSDLAPADIDMTSRLTREISLKVPLVSAAMDTVTESRMAIAMARQGGLGVLHRNLSIE DQAYQVDLVKRTQTGIISNPVTIGPDATLEQLDQLAGEYRISGFPVVDADNRLLGIITNRDLRFTPVAEWATTKVDEVMT PMPLITAPPDISREDATLLLRQHKRERLPLVDAQGRLAGLITVKDFVKSEQFPHASKDGAGRLMVGAAIGYFGDAWQRAT TLVEAGVDVLVADTAHGHVTLLLDMVRRLKADPATRHVQVIGGNVATRDGAQAFVDAGADAVKVGFGPGSICTTRVVTGC GVPQITAVYEASLACQPVGVPVIADGGLQQSGDIAKAIVAGAETVMIGSLLAGCEESPGELIFVNGKQYKSYRGMGSLAA MSSRGKKSYSKDRYFQAEVTSDDKIVPEGIEGQVAYRGPLAAVAHQLIGGLNQSMFYIGAATIPELQAKGRFVRITSASL KESHPHDVQMTVEAPNYSGR >Mature_500_residues MELPEKFAALGLTYDDVLLLPGHSDLAPADIDMTSRLTREISLKVPLVSAAMDTVTESRMAIAMARQGGLGVLHRNLSIE DQAYQVDLVKRTQTGIISNPVTIGPDATLEQLDQLAGEYRISGFPVVDADNRLLGIITNRDLRFTPVAEWATTKVDEVMT PMPLITAPPDISREDATLLLRQHKRERLPLVDAQGRLAGLITVKDFVKSEQFPHASKDGAGRLMVGAAIGYFGDAWQRAT TLVEAGVDVLVADTAHGHVTLLLDMVRRLKADPATRHVQVIGGNVATRDGAQAFVDAGADAVKVGFGPGSICTTRVVTGC GVPQITAVYEASLACQPVGVPVIADGGLQQSGDIAKAIVAGAETVMIGSLLAGCEESPGELIFVNGKQYKSYRGMGSLAA MSSRGKKSYSKDRYFQAEVTSDDKIVPEGIEGQVAYRGPLAAVAHQLIGGLNQSMFYIGAATIPELQAKGRFVRITSASL KESHPHDVQMTVEAPNYSGR
Specific function: GMP biosynthesis from IMP; first step. [C]
COG id: COG0516
COG function: function code F; IMP dehydrogenase/GMP reductase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 2 CBS domains [H]
Homologues:
Organism=Homo sapiens, GI66933016, Length=489, Percent_Identity=41.3087934560327, Blast_Score=345, Evalue=4e-95, Organism=Homo sapiens, GI217035146, Length=466, Percent_Identity=41.4163090128755, Blast_Score=338, Evalue=5e-93, Organism=Homo sapiens, GI156616279, Length=466, Percent_Identity=41.4163090128755, Blast_Score=338, Evalue=1e-92, Organism=Homo sapiens, GI34328928, Length=466, Percent_Identity=41.4163090128755, Blast_Score=337, Evalue=1e-92, Organism=Homo sapiens, GI34328930, Length=466, Percent_Identity=41.4163090128755, Blast_Score=337, Evalue=1e-92, Organism=Homo sapiens, GI217035148, Length=466, Percent_Identity=40.7725321888412, Blast_Score=329, Evalue=3e-90, Organism=Homo sapiens, GI217035152, Length=458, Percent_Identity=41.0480349344978, Blast_Score=328, Evalue=9e-90, Organism=Homo sapiens, GI217035150, Length=466, Percent_Identity=39.0557939914163, Blast_Score=305, Evalue=5e-83, Organism=Homo sapiens, GI50541956, Length=232, Percent_Identity=37.0689655172414, Blast_Score=137, Evalue=2e-32, Organism=Homo sapiens, GI50541954, Length=232, Percent_Identity=37.0689655172414, Blast_Score=137, Evalue=2e-32, Organism=Homo sapiens, GI50541952, Length=232, Percent_Identity=37.0689655172414, Blast_Score=137, Evalue=2e-32, Organism=Homo sapiens, GI50541948, Length=232, Percent_Identity=37.0689655172414, Blast_Score=137, Evalue=2e-32, Organism=Homo sapiens, GI156104880, Length=244, Percent_Identity=33.1967213114754, Blast_Score=134, Evalue=2e-31, Organism=Escherichia coli, GI1788855, Length=498, Percent_Identity=50.2008032128514, Blast_Score=431, Evalue=1e-122, Organism=Escherichia coli, GI1786293, Length=229, Percent_Identity=34.9344978165939, Blast_Score=138, Evalue=9e-34, Organism=Caenorhabditis elegans, GI71994385, Length=483, Percent_Identity=37.2670807453416, Blast_Score=295, Evalue=3e-80, Organism=Caenorhabditis elegans, GI71994389, Length=433, Percent_Identity=38.568129330254, Blast_Score=284, Evalue=1e-76, Organism=Caenorhabditis elegans, GI17560440, Length=284, Percent_Identity=33.8028169014084, Blast_Score=148, Evalue=6e-36, Organism=Saccharomyces cerevisiae, GI6322012, Length=490, Percent_Identity=39.3877551020408, Blast_Score=333, Evalue=3e-92, Organism=Saccharomyces cerevisiae, GI6323585, Length=489, Percent_Identity=37.8323108384458, Blast_Score=326, Evalue=7e-90, Organism=Saccharomyces cerevisiae, GI6323464, Length=489, Percent_Identity=38.8548057259714, Blast_Score=322, Evalue=7e-89, Organism=Saccharomyces cerevisiae, GI6319352, Length=344, Percent_Identity=38.6627906976744, Blast_Score=245, Evalue=1e-65, Organism=Saccharomyces cerevisiae, GI6319353, Length=135, Percent_Identity=40, Blast_Score=83, Evalue=9e-17, Organism=Drosophila melanogaster, GI24641071, Length=484, Percent_Identity=40.0826446280992, Blast_Score=341, Evalue=6e-94, Organism=Drosophila melanogaster, GI24641073, Length=484, Percent_Identity=40.0826446280992, Blast_Score=341, Evalue=6e-94, Organism=Drosophila melanogaster, GI28571163, Length=443, Percent_Identity=39.5033860045147, Blast_Score=297, Evalue=1e-80,
Paralogues:
None
Copy number: 600 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013785 - InterPro: IPR000644 - InterPro: IPR005990 - InterPro: IPR018529 - InterPro: IPR015875 - InterPro: IPR001093 [H]
Pfam domain/function: PF00571 CBS; PF00478 IMPDH [H]
EC number: =1.1.1.205 [H]
Molecular weight: Translated: 53283; Mature: 53283
Theoretical pI: Translated: 5.84; Mature: 5.84
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MELPEKFAALGLTYDDVLLLPGHSDLAPADIDMTSRLTREISLKVPLVSAAMDTVTESRM CCCCHHHHHHCCCCCCEEEECCCCCCCCCCCCHHHHHHHEEEEECCHHHHHHHHHHHHHH AIAMARQGGLGVLHRNLSIEDQAYQVDLVKRTQTGIISNPVTIGPDATLEQLDQLAGEYR EEEECCCCCCEEEEECCCCCCCEEEEEEEHHHCCCCCCCCEEECCCCHHHHHHHHHCCEE ISGFPVVDADNRLLGIITNRDLRFTPVAEWATTKVDEVMTPMPLITAPPDISREDATLLL CCCEEEECCCCCEEEEEECCCEEEEECHHHHHHHHHHHHCCCCEEECCCCCCCCHHHHHH RQHKRERLPLVDAQGRLAGLITVKDFVKSEQFPHASKDGAGRLMVGAAIGYFGDAWQRAT HHHHHHCCCEECCCCCEEEEEEHHHHHHCCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHH TLVEAGVDVLVADTAHGHVTLLLDMVRRLKADPATRHVQVIGGNVATRDGAQAFVDAGAD HHHHCCCEEEEEECCCCHHHHHHHHHHHHCCCCCCCEEEEEECCEECCCCHHHHHHCCCC AVKVGFGPGSICTTRVVTGCGVPQITAVYEASLACQPVGVPVIADGGLQQSGDIAKAIVA EEEEECCCCCHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCEEEECCCCCCCCCHHHHHHH GAETVMIGSLLAGCEESPGELIFVNGKQYKSYRGMGSLAAMSSRGKKSYSKDRYFQAEVT CCHHHHHHHHHHCCCCCCCCEEEEECCHHHHHCCCCHHHHHHHCCCCCCCCCCEEEEEEC SDDKIVPEGIEGQVAYRGPLAAVAHQLIGGLNQSMFYIGAATIPELQAKGRFVRITSASL CCCCCCCCCCCCCEEECCHHHHHHHHHHCCCCCCEEEEECCCCCHHHHCCCEEEEEECHH KESHPHDVQMTVEAPNYSGR CCCCCCCEEEEEECCCCCCC >Mature Secondary Structure MELPEKFAALGLTYDDVLLLPGHSDLAPADIDMTSRLTREISLKVPLVSAAMDTVTESRM CCCCHHHHHHCCCCCCEEEECCCCCCCCCCCCHHHHHHHEEEEECCHHHHHHHHHHHHHH AIAMARQGGLGVLHRNLSIEDQAYQVDLVKRTQTGIISNPVTIGPDATLEQLDQLAGEYR EEEECCCCCCEEEEECCCCCCCEEEEEEEHHHCCCCCCCCEEECCCCHHHHHHHHHCCEE ISGFPVVDADNRLLGIITNRDLRFTPVAEWATTKVDEVMTPMPLITAPPDISREDATLLL CCCEEEECCCCCEEEEEECCCEEEEECHHHHHHHHHHHHCCCCEEECCCCCCCCHHHHHH RQHKRERLPLVDAQGRLAGLITVKDFVKSEQFPHASKDGAGRLMVGAAIGYFGDAWQRAT HHHHHHCCCEECCCCCEEEEEEHHHHHHCCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHH TLVEAGVDVLVADTAHGHVTLLLDMVRRLKADPATRHVQVIGGNVATRDGAQAFVDAGAD HHHHCCCEEEEEECCCCHHHHHHHHHHHHCCCCCCCEEEEEECCEECCCCHHHHHHCCCC AVKVGFGPGSICTTRVVTGCGVPQITAVYEASLACQPVGVPVIADGGLQQSGDIAKAIVA EEEEECCCCCHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCEEEECCCCCCCCCHHHHHHH GAETVMIGSLLAGCEESPGELIFVNGKQYKSYRGMGSLAAMSSRGKKSYSKDRYFQAEVT CCHHHHHHHHHHCCCCCCCCEEEEECCHHHHHCCCCHHHHHHHCCCCCCCCCCEEEEEEC SDDKIVPEGIEGQVAYRGPLAAVAHQLIGGLNQSMFYIGAATIPELQAKGRFVRITSASL CCCCCCCCCCCCCEEECCHHHHHHHHHHCCCCCCEEEEECCCCCHHHHCCCEEEEEECHH KESHPHDVQMTVEAPNYSGR CCCCCCCEEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 12788972 [H]