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The map label for this gene is 119717845

Identifier: 119717845

GI number: 119717845

Start: 3842783

End: 3843433

Strand: Reverse

Name: 119717845

Synonym: Noca_3623

Alternate gene names: NA

Gene position: 3843433-3842783 (Counterclockwise)

Preceding gene: 119717850

Following gene: 119717842

Centisome position: 77.09

GC content: 76.19

Gene sequence:

>651_bases
ATGCCCGAGGAGCGGCCCGGCGCCGGCGCGTGGATCCCCGAGAGCCTCAGCCTGCGGGCCCTGCGCGCGGCCGCGCAGGC
GTGCCGCGGCTGCGAGCTCTACCGCGACGCCACCCAGGCCGTGATGGGCGACGGGCGGCGCGACGCCGACCTGATGCTGC
TCGGGGAGCAACCCGGCGACCGCGAGGACCGGGTGGGAGAGCCGTTCGTCGGGCCGGCGGGGAAGGTGCTCGACGAGGCA
CTCGCGGAGGTCGGCATCGCGCCGGCGGACGTCTACACGACCAACGTGGTCAAGCACTTCCGCTGGTCGGGGACCCGGGG
CAAGCAGCGCATCCACAAGTCGCCGAGCCGGGCGCACGTCGCGGCCTGCGGGCCCTGGCTCGAGGCGGAGCTGCGGCTGG
TACGGCCCACGGGCGTGGTGCTGCTGGGCGGCACCGCCGGCAAGGCGGTGTACGGCGCGGGCTTCCGAGTGGGCGAGTCA
CGGGGCCGGATCCACGACTGGCCGGCCTCGTTCCCCGTGGCGCGGCCGCCCGCCTGGGTGCTCGCGACCACGCACCCGTC
CGCCGTGCTGCGGGCCGACGACCGCAGGTCGGCGTACGAGGGTCTCGTCGCCGACCTGCGGGTCGTGGCGCAGCGGCTGA
TGGACCACTGA

Upstream 100 bases:

>100_bases
AGCTGGACTCGGCCGGGGAGGGCTTGAGCGTGCAGACGAGGACGAGGGCGCGCAGGGGGGTGTCGGTCATGCCGGCCCGG
TTCCCGGGTACCGGCGGACC

Downstream 100 bases:

>100_bases
GCTGGATGGGTCTCGACACGCCGGTCGCGACCTCGCAGGCTCGGTCGCGCGTCTCGCTCGACCACCATCAGCCGGTCCGC
TGGCGCGTCCCGGCTAGGTG

Product: phage SPO1 DNA polymerase-like protein

Products: diphosphate; DNAn+1

Alternate protein names: Uracil-DNA Glycosylase; DNA Polymerase Related Protein; Phage SPO1 DNA Polymerase-Like Protein; Uracil DNA Glycosylase Superfamily Protein; Uracil-DNA Glycosylase Superfamily Protein; Uracil-DNA Glycosylase Superfamily; DNA Polymerase; DNA Polymerase Bacteriophage-Type; DNA-Directed DNA Polymerase Protein; Uracil-DNA Glycosylase Family 4 Protein; Phage DNA Polymerase; DNA Polymerase-Related Protein; DNA Polymerase-Related Protein Bacteriophage-Type; Phage Related DNA Polymerase; DNA Glycosylase; Uracil DNA Glycosylase Protein; Arginine Biosynthesis Bifunctional Protein ArgJ; Bacteriophage-Type DNA Polymerase; Uracil DNA Glycosylase; DNA-Directed DNA Polymerase Bacteriophage-Type; Uracil DNA Glycosylase Superfamily; Uracil-DNA Glycosylase Phage-Related Protein; Phage Spo1 DNA Polymerase-Related Protein; Phage SPO1 DNA Polymerase; DNA-Directed DNA Polymerase; Transcriptional Regulator Fis Family; Uracil-DNA Glycosylase-Related Protein; N-Terminus Of Phage SPO1 DNA Polymerase; Helicase/Glycosylase; Fis Family Transcriptional Regulator; DNA Polymerase-Like Protein

Number of amino acids: Translated: 216; Mature: 215

Protein sequence:

>216_residues
MPEERPGAGAWIPESLSLRALRAAAQACRGCELYRDATQAVMGDGRRDADLMLLGEQPGDREDRVGEPFVGPAGKVLDEA
LAEVGIAPADVYTTNVVKHFRWSGTRGKQRIHKSPSRAHVAACGPWLEAELRLVRPTGVVLLGGTAGKAVYGAGFRVGES
RGRIHDWPASFPVARPPAWVLATTHPSAVLRADDRRSAYEGLVADLRVVAQRLMDH

Sequences:

>Translated_216_residues
MPEERPGAGAWIPESLSLRALRAAAQACRGCELYRDATQAVMGDGRRDADLMLLGEQPGDREDRVGEPFVGPAGKVLDEA
LAEVGIAPADVYTTNVVKHFRWSGTRGKQRIHKSPSRAHVAACGPWLEAELRLVRPTGVVLLGGTAGKAVYGAGFRVGES
RGRIHDWPASFPVARPPAWVLATTHPSAVLRADDRRSAYEGLVADLRVVAQRLMDH
>Mature_215_residues
PEERPGAGAWIPESLSLRALRAAAQACRGCELYRDATQAVMGDGRRDADLMLLGEQPGDREDRVGEPFVGPAGKVLDEAL
AEVGIAPADVYTTNVVKHFRWSGTRGKQRIHKSPSRAHVAACGPWLEAELRLVRPTGVVLLGGTAGKAVYGAGFRVGESR
GRIHDWPASFPVARPPAWVLATTHPSAVLRADDRRSAYEGLVADLRVVAQRLMDH

Specific function: Unknown

COG id: COG1573

COG function: function code L; Uracil-DNA glycosylase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 2.7.7.7

Molecular weight: Translated: 23317; Mature: 23186

Theoretical pI: Translated: 8.87; Mature: 8.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPEERPGAGAWIPESLSLRALRAAAQACRGCELYRDATQAVMGDGRRDADLMLLGEQPGD
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCEEEEECCCCCC
REDRVGEPFVGPAGKVLDEALAEVGIAPADVYTTNVVKHFRWSGTRGKQRIHKSPSRAHV
CCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCEE
AACGPWLEAELRLVRPTGVVLLGGTAGKAVYGAGFRVGESRGRIHDWPASFPVARPPAWV
EECCCCCCCCEEEECCCCEEEECCCCCCEEECCCEEECCCCCCCCCCCCCCCCCCCCEEE
LATTHPSAVLRADDRRSAYEGLVADLRVVAQRLMDH
EEECCCCCEEECCCHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
PEERPGAGAWIPESLSLRALRAAAQACRGCELYRDATQAVMGDGRRDADLMLLGEQPGD
CCCCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCEEEEECCCCCC
REDRVGEPFVGPAGKVLDEALAEVGIAPADVYTTNVVKHFRWSGTRGKQRIHKSPSRAHV
CCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCEE
AACGPWLEAELRLVRPTGVVLLGGTAGKAVYGAGFRVGESRGRIHDWPASFPVARPPAWV
EECCCCCCCCEEEECCCCEEEECCCCCCEEECCCEEECCCCCCCCCCCCCCCCCCCCEEE
LATTHPSAVLRADDRRSAYEGLVADLRVVAQRLMDH
EEECCCCCEEECCCHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: deoxynucleoside triphosphate; DNAn

Specific reaction: deoxynucleoside triphosphate + DNA(n) = diphosphate + DNA(n+1)

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA