| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is 119717850
Identifier: 119717850
GI number: 119717850
Start: 3846015
End: 3846470
Strand: Reverse
Name: 119717850
Synonym: Noca_3628
Alternate gene names: NA
Gene position: 3846470-3846015 (Counterclockwise)
Preceding gene: 119717853
Following gene: 119717845
Centisome position: 77.15
GC content: 72.59
Gene sequence:
>456_bases ATGGCGATCAACACCCGCAGGATGAAGGCCACTCCCGAGCAGGTCTGGGATGTGCTGGCCGACGGCTGGCTCTACCCGCT CTGGGTGGTCGGCGCCTCCCGGATGCGCGAGGTCGACGACGCCTGGCCCGTGGTCGGCTCGCAGCTGCACCACTCGGTCG GCACCTGGCCGGCGCTCCTGGACGACAGCACCGAGGTGGTGGAGTCGACCCCGGGCTCGACGCTGGTGCTGCACGCCCGG GCCTGGCCGACCGGTGCCGCCCGGGTGACGATCCGGCTGGAGGCGGTCGGCGTCGAGACCGACGTCAGCATCGAGGAGGA CGCCGTCAGCGGCCCTGCGCTCCTGATCCCGAAGCCGGTTCGCGACCTGCAGCTGACGTGGCGCAACTCCGAGAGCCTGC GGCGGCTCGCCTACATCGCCGAGCGCCGCAGCGCCGGGAGGACCTCCGCCTCGTAG
Upstream 100 bases:
>100_bases TCAGGTTGGGTAGAGTTTTCAACGAACCGCCGGGGACCCGAGACCCCGGCGGTTCTTCCATTTCCTCGAATGGATCCCGG CCAGTGGGTACAGCGCTGCC
Downstream 100 bases:
>100_bases GCGCGGAAGAAGTCGTCCTGGTCCGGGCCCACCTGCGCGACGTACAGCTCGTCGAACCCGGCCTCGGCGTACTTCGCCAG CTTGGTGACGTGCTCCTCGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 151; Mature: 150
Protein sequence:
>151_residues MAINTRRMKATPEQVWDVLADGWLYPLWVVGASRMREVDDAWPVVGSQLHHSVGTWPALLDDSTEVVESTPGSTLVLHAR AWPTGAARVTIRLEAVGVETDVSIEEDAVSGPALLIPKPVRDLQLTWRNSESLRRLAYIAERRSAGRTSAS
Sequences:
>Translated_151_residues MAINTRRMKATPEQVWDVLADGWLYPLWVVGASRMREVDDAWPVVGSQLHHSVGTWPALLDDSTEVVESTPGSTLVLHAR AWPTGAARVTIRLEAVGVETDVSIEEDAVSGPALLIPKPVRDLQLTWRNSESLRRLAYIAERRSAGRTSAS >Mature_150_residues AINTRRMKATPEQVWDVLADGWLYPLWVVGASRMREVDDAWPVVGSQLHHSVGTWPALLDDSTEVVESTPGSTLVLHARA WPTGAARVTIRLEAVGVETDVSIEEDAVSGPALLIPKPVRDLQLTWRNSESLRRLAYIAERRSAGRTSAS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16624; Mature: 16493
Theoretical pI: Translated: 5.69; Mature: 5.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAINTRRMKATPEQVWDVLADGWLYPLWVVGASRMREVDDAWPVVGSQLHHSVGTWPALL CCCCCCCCCCCHHHHHHHHHCCCHHHHHHHCHHHHHHHHHHCCHHHHHHHHHCCCCCHHC DDSTEVVESTPGSTLVLHARAWPTGAARVTIRLEAVGVETDVSIEEDAVSGPALLIPKPV CCCHHHHHCCCCCEEEEEEECCCCCCEEEEEEEEEECCCCCCCCCCCCCCCCEEECCCCC RDLQLTWRNSESLRRLAYIAERRSAGRTSAS CCEEEEECCHHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure AINTRRMKATPEQVWDVLADGWLYPLWVVGASRMREVDDAWPVVGSQLHHSVGTWPALL CCCCCCCCCCHHHHHHHHHCCCHHHHHHHCHHHHHHHHHHCCHHHHHHHHHCCCCCHHC DDSTEVVESTPGSTLVLHARAWPTGAARVTIRLEAVGVETDVSIEEDAVSGPALLIPKPV CCCHHHHHCCCCCEEEEEEECCCCCCEEEEEEEEEECCCCCCCCCCCCCCCCEEECCCCC RDLQLTWRNSESLRRLAYIAERRSAGRTSAS CCEEEEECCHHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA