| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is 119717802
Identifier: 119717802
GI number: 119717802
Start: 3798487
End: 3798837
Strand: Reverse
Name: 119717802
Synonym: Noca_3580
Alternate gene names: NA
Gene position: 3798837-3798487 (Counterclockwise)
Preceding gene: 119717803
Following gene: 119717801
Centisome position: 76.19
GC content: 75.78
Gene sequence:
>351_bases GTGACCGACCCCTCCCGCGCCCCCTCCGATGTCGCGGCCCTCGCCGACCAGCTCCTCGACGCGCAGGTGGCCTACCACGT GGCCCGGTTGAGCGGAGCCGGCCTGTCGGAGACCGTCGCCGGGCTCGCCGACGACCTGCTCGCGGCGTCCGCCGGGCAGC CGATCGCCGACCTCGTCGACCGGGACACCCTGGTCGCGATCGCGACGCGCCTGCTGCAGAGCGTGCCGGGCAGTGCCGCC ACCGGCGCGGTCGTCGAGGTCCTCGCCGACGTCGTCCACGACGGGCCGGTCGACCGGCACCTGCTCGGCGAGCTGGCCGA CCGGGAGCAGATCGAGGCGCTGCTCGACTAG
Upstream 100 bases:
>100_bases TTCCTGCTCGCCGGCGTCGGCGTCGCACTGATCCTGCTGGCCGGCTCGATCCCCGACCAGCCGCTGTAGCCCGCACCGCT CCCTCGCGTACGGTCGGTCC
Downstream 100 bases:
>100_bases TTGATCGCGCTGAGCCCGGGGCTCGAACGGGGCCTGGACCGGCTCACCGCCAGCCCGCTGGTCGGGACCGTCGCCTCGCG GTTCATGGGCCGGATCGTCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 116; Mature: 115
Protein sequence:
>116_residues MTDPSRAPSDVAALADQLLDAQVAYHVARLSGAGLSETVAGLADDLLAASAGQPIADLVDRDTLVAIATRLLQSVPGSAA TGAVVEVLADVVHDGPVDRHLLGELADREQIEALLD
Sequences:
>Translated_116_residues MTDPSRAPSDVAALADQLLDAQVAYHVARLSGAGLSETVAGLADDLLAASAGQPIADLVDRDTLVAIATRLLQSVPGSAA TGAVVEVLADVVHDGPVDRHLLGELADREQIEALLD >Mature_115_residues TDPSRAPSDVAALADQLLDAQVAYHVARLSGAGLSETVAGLADDLLAASAGQPIADLVDRDTLVAIATRLLQSVPGSAAT GAVVEVLADVVHDGPVDRHLLGELADREQIEALLD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11844; Mature: 11713
Theoretical pI: Translated: 3.93; Mature: 3.93
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 0.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDPSRAPSDVAALADQLLDAQVAYHVARLSGAGLSETVAGLADDLLAASAGQPIADLVD CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCHHHHHHH RDTLVAIATRLLQSVPGSAATGAVVEVLADVVHDGPVDRHLLGELADREQIEALLD HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCC >Mature Secondary Structure TDPSRAPSDVAALADQLLDAQVAYHVARLSGAGLSETVAGLADDLLAASAGQPIADLVD CCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCHHHHHHH RDTLVAIATRLLQSVPGSAATGAVVEVLADVVHDGPVDRHLLGELADREQIEALLD HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA