| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is 119717801
Identifier: 119717801
GI number: 119717801
Start: 3797797
End: 3798486
Strand: Reverse
Name: 119717801
Synonym: Noca_3579
Alternate gene names: NA
Gene position: 3798486-3797797 (Counterclockwise)
Preceding gene: 119717802
Following gene: 119717799
Centisome position: 76.19
GC content: 74.64
Gene sequence:
>690_bases TTGATCGCGCTGAGCCCGGGGCTCGAACGGGGCCTGGACCGGCTCACCGCCAGCCCGCTGGTCGGGACCGTCGCCTCGCG GTTCATGGGCCGGATCGTCGGCGAGGTGCTCCAGGCCAACAAGGCGGTCGCCGACCGCGTCCCCGGCCTCGGCTCCCTGA TGTCGTTCGGCACCAGCGCCGCGTCGAAGGTGATGGGCGTGGCGGACAAGCAGTTCGAGGGGCTGATCGGCGACACCGTC GGGCGCGGCGGCACCTACGCCGTCGGCCGGCTCAACAAGATCCTGGTCGAGACCGTGCGGGACCCCACGACCCGCGCGGC GGTGCTGCAGGTGTGGGAGCTGGCCGCCGCCGAGCCGATCTCGGGGCTGAGCCGCAGCGTCACCCGCGAGCAGCTCGCCG GGCTCGTCGACGCGGCGTACGACCTGGTCGTGACCGCCGCCGCGGGGGAGCCGGCCGCGGGGCTGGTCGAGGCCGCGGTC GACGGGCTGCTGGAGCGGCTCGGCGGCTACACGCCCACCGAGCTGCTCGATGAGCTCGGCCTGGACCGGGCCGACGTCGT CGCGGACGTCGTGCGGCTCGCGCCGTACGCCGTGGCGGCGCTGCACGAGTCCGGTGAGCTGGAGCGGATCATCCGCGCCC GGCTCACGCCGTTCTACGACTCGGCCGCGGTCAGGTCCCTGCTGGGCTGA
Upstream 100 bases:
>100_bases CGTCGAGGTCCTCGCCGACGTCGTCCACGACGGGCCGGTCGACCGGCACCTGCTCGGCGAGCTGGCCGACCGGGAGCAGA TCGAGGCGCTGCTCGACTAG
Downstream 100 bases:
>100_bases GTTGTCGGGGCCGACCCGTCAGATCAGCCCCAGCTCCTTGACGGCCTCGCGCTCGTCGGCGAGCTCGGCGGTCGAGGCGT CGATCTTGGCGCGCGAGAAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 229; Mature: 229
Protein sequence:
>229_residues MIALSPGLERGLDRLTASPLVGTVASRFMGRIVGEVLQANKAVADRVPGLGSLMSFGTSAASKVMGVADKQFEGLIGDTV GRGGTYAVGRLNKILVETVRDPTTRAAVLQVWELAAAEPISGLSRSVTREQLAGLVDAAYDLVVTAAAGEPAAGLVEAAV DGLLERLGGYTPTELLDELGLDRADVVADVVRLAPYAVAALHESGELERIIRARLTPFYDSAAVRSLLG
Sequences:
>Translated_229_residues MIALSPGLERGLDRLTASPLVGTVASRFMGRIVGEVLQANKAVADRVPGLGSLMSFGTSAASKVMGVADKQFEGLIGDTV GRGGTYAVGRLNKILVETVRDPTTRAAVLQVWELAAAEPISGLSRSVTREQLAGLVDAAYDLVVTAAAGEPAAGLVEAAV DGLLERLGGYTPTELLDELGLDRADVVADVVRLAPYAVAALHESGELERIIRARLTPFYDSAAVRSLLG >Mature_229_residues MIALSPGLERGLDRLTASPLVGTVASRFMGRIVGEVLQANKAVADRVPGLGSLMSFGTSAASKVMGVADKQFEGLIGDTV GRGGTYAVGRLNKILVETVRDPTTRAAVLQVWELAAAEPISGLSRSVTREQLAGLVDAAYDLVVTAAAGEPAAGLVEAAV DGLLERLGGYTPTELLDELGLDRADVVADVVRLAPYAVAALHESGELERIIRARLTPFYDSAAVRSLLG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23810; Mature: 23810
Theoretical pI: Translated: 4.68; Mature: 4.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIALSPGLERGLDRLTASPLVGTVASRFMGRIVGEVLQANKAVADRVPGLGSLMSFGTSA CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH ASKVMGVADKQFEGLIGDTVGRGGTYAVGRLNKILVETVRDPTTRAAVLQVWELAAAEPI HHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCHH SGLSRSVTREQLAGLVDAAYDLVVTAAAGEPAAGLVEAAVDGLLERLGGYTPTELLDELG HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHC LDRADVVADVVRLAPYAVAALHESGELERIIRARLTPFYDSAAVRSLLG CCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHC >Mature Secondary Structure MIALSPGLERGLDRLTASPLVGTVASRFMGRIVGEVLQANKAVADRVPGLGSLMSFGTSA CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH ASKVMGVADKQFEGLIGDTVGRGGTYAVGRLNKILVETVRDPTTRAAVLQVWELAAAEPI HHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCHH SGLSRSVTREQLAGLVDAAYDLVVTAAAGEPAAGLVEAAVDGLLERLGGYTPTELLDELG HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHC LDRADVVADVVRLAPYAVAALHESGELERIIRARLTPFYDSAAVRSLLG CCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA