Definition Nocardioides sp. JS614 chromosome, complete genome.
Accession NC_008699
Length 4,985,871

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The map label for this gene is 119717801

Identifier: 119717801

GI number: 119717801

Start: 3797797

End: 3798486

Strand: Reverse

Name: 119717801

Synonym: Noca_3579

Alternate gene names: NA

Gene position: 3798486-3797797 (Counterclockwise)

Preceding gene: 119717802

Following gene: 119717799

Centisome position: 76.19

GC content: 74.64

Gene sequence:

>690_bases
TTGATCGCGCTGAGCCCGGGGCTCGAACGGGGCCTGGACCGGCTCACCGCCAGCCCGCTGGTCGGGACCGTCGCCTCGCG
GTTCATGGGCCGGATCGTCGGCGAGGTGCTCCAGGCCAACAAGGCGGTCGCCGACCGCGTCCCCGGCCTCGGCTCCCTGA
TGTCGTTCGGCACCAGCGCCGCGTCGAAGGTGATGGGCGTGGCGGACAAGCAGTTCGAGGGGCTGATCGGCGACACCGTC
GGGCGCGGCGGCACCTACGCCGTCGGCCGGCTCAACAAGATCCTGGTCGAGACCGTGCGGGACCCCACGACCCGCGCGGC
GGTGCTGCAGGTGTGGGAGCTGGCCGCCGCCGAGCCGATCTCGGGGCTGAGCCGCAGCGTCACCCGCGAGCAGCTCGCCG
GGCTCGTCGACGCGGCGTACGACCTGGTCGTGACCGCCGCCGCGGGGGAGCCGGCCGCGGGGCTGGTCGAGGCCGCGGTC
GACGGGCTGCTGGAGCGGCTCGGCGGCTACACGCCCACCGAGCTGCTCGATGAGCTCGGCCTGGACCGGGCCGACGTCGT
CGCGGACGTCGTGCGGCTCGCGCCGTACGCCGTGGCGGCGCTGCACGAGTCCGGTGAGCTGGAGCGGATCATCCGCGCCC
GGCTCACGCCGTTCTACGACTCGGCCGCGGTCAGGTCCCTGCTGGGCTGA

Upstream 100 bases:

>100_bases
CGTCGAGGTCCTCGCCGACGTCGTCCACGACGGGCCGGTCGACCGGCACCTGCTCGGCGAGCTGGCCGACCGGGAGCAGA
TCGAGGCGCTGCTCGACTAG

Downstream 100 bases:

>100_bases
GTTGTCGGGGCCGACCCGTCAGATCAGCCCCAGCTCCTTGACGGCCTCGCGCTCGTCGGCGAGCTCGGCGGTCGAGGCGT
CGATCTTGGCGCGCGAGAAG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 229; Mature: 229

Protein sequence:

>229_residues
MIALSPGLERGLDRLTASPLVGTVASRFMGRIVGEVLQANKAVADRVPGLGSLMSFGTSAASKVMGVADKQFEGLIGDTV
GRGGTYAVGRLNKILVETVRDPTTRAAVLQVWELAAAEPISGLSRSVTREQLAGLVDAAYDLVVTAAAGEPAAGLVEAAV
DGLLERLGGYTPTELLDELGLDRADVVADVVRLAPYAVAALHESGELERIIRARLTPFYDSAAVRSLLG

Sequences:

>Translated_229_residues
MIALSPGLERGLDRLTASPLVGTVASRFMGRIVGEVLQANKAVADRVPGLGSLMSFGTSAASKVMGVADKQFEGLIGDTV
GRGGTYAVGRLNKILVETVRDPTTRAAVLQVWELAAAEPISGLSRSVTREQLAGLVDAAYDLVVTAAAGEPAAGLVEAAV
DGLLERLGGYTPTELLDELGLDRADVVADVVRLAPYAVAALHESGELERIIRARLTPFYDSAAVRSLLG
>Mature_229_residues
MIALSPGLERGLDRLTASPLVGTVASRFMGRIVGEVLQANKAVADRVPGLGSLMSFGTSAASKVMGVADKQFEGLIGDTV
GRGGTYAVGRLNKILVETVRDPTTRAAVLQVWELAAAEPISGLSRSVTREQLAGLVDAAYDLVVTAAAGEPAAGLVEAAV
DGLLERLGGYTPTELLDELGLDRADVVADVVRLAPYAVAALHESGELERIIRARLTPFYDSAAVRSLLG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23810; Mature: 23810

Theoretical pI: Translated: 4.68; Mature: 4.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIALSPGLERGLDRLTASPLVGTVASRFMGRIVGEVLQANKAVADRVPGLGSLMSFGTSA
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
ASKVMGVADKQFEGLIGDTVGRGGTYAVGRLNKILVETVRDPTTRAAVLQVWELAAAEPI
HHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCHH
SGLSRSVTREQLAGLVDAAYDLVVTAAAGEPAAGLVEAAVDGLLERLGGYTPTELLDELG
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHC
LDRADVVADVVRLAPYAVAALHESGELERIIRARLTPFYDSAAVRSLLG
CCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHC
>Mature Secondary Structure
MIALSPGLERGLDRLTASPLVGTVASRFMGRIVGEVLQANKAVADRVPGLGSLMSFGTSA
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
ASKVMGVADKQFEGLIGDTVGRGGTYAVGRLNKILVETVRDPTTRAAVLQVWELAAAEPI
HHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCHH
SGLSRSVTREQLAGLVDAAYDLVVTAAAGEPAAGLVEAAVDGLLERLGGYTPTELLDELG
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHC
LDRADVVADVVRLAPYAVAALHESGELERIIRARLTPFYDSAAVRSLLG
CCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA