Definition Nocardioides sp. JS614 chromosome, complete genome.
Accession NC_008699
Length 4,985,871

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The map label for this gene is 119717799

Identifier: 119717799

GI number: 119717799

Start: 3796036

End: 3796713

Strand: Reverse

Name: 119717799

Synonym: Noca_3577

Alternate gene names: NA

Gene position: 3796713-3796036 (Counterclockwise)

Preceding gene: 119717801

Following gene: 119717797

Centisome position: 76.15

GC content: 75.66

Gene sequence:

>678_bases
GTGCGGCCCCTCCTCCTGGCGGCCGCACTCGCCGTCCTGGCCGGCTGTGGCACCGCATCGGCGCCGAGCCCGCCGGCCGG
GGTGGACGAGCTCACGATCCCCACCCCGTCCCCGGACCCCGGCGACTTCGTCGCGACCGTGGACAACCCCTGGTTCCCGC
TCGAGGCCGGCGATTCGTGGGTCTACGCCGTCACCGACGCCGAGGGCGCGCACCGGATGCGGGTCACCGTGGAGACCGGC
CCGGAGGTCGCCGGCGTGGCCACGACCAGCCGCGTGACGACCGAGCCGTCCGGGGTCGTCACCGACTGGTTCGCGCAGGA
CGAGCGCGGCAACGTGTGGTGGTTCGGCCGCGCCGGCAGCTGGCGGGCGGGGGAGGACGGCGCCGAGGCGGGCATCGCGA
TGCTGGCTCGGCCCCGGGTCGGTGACGGCTACCGGACGGGCTACCTGGAGGGAGTCGTGGAGGACACGGCCCGCGTGGTG
TCGCTGGACGAGAGCGCCGAGGTCGCCGCCGGGTCGTACGACGACCTCCTGCTCCTCGAGCAGCAGAGCGCGCTCGAGCC
CGGGGCCACGGCCGAGCTCTCCTACGGCCGGGACGTGGGTCTGGTGGAGGCCCGGCTGGTCTCCGACAGCTACCGGACCG
TGCGGCTGGTGCGGGGACCTACTCCGCCGGCGGCCTGA

Upstream 100 bases:

>100_bases
CCTTCAACGGGGTAGAGCTCACGACGACTCCTTCACGCGACGGTTTCTCGTCCCGACGCTAGCAGCGGCTCCGCCTCCTG
CGATGCTGGGGTCCATGACC

Downstream 100 bases:

>100_bases
TCCGGGTCCCGCCGTCGTCCGACTCATCCTGGGCCGCCTGCTCGGCCGCCTGCTGGACGCGCCACTGCTCGGGCGTCTGC
CCCACGGGGTGCCACTGCTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 225; Mature: 225

Protein sequence:

>225_residues
MRPLLLAAALAVLAGCGTASAPSPPAGVDELTIPTPSPDPGDFVATVDNPWFPLEAGDSWVYAVTDAEGAHRMRVTVETG
PEVAGVATTSRVTTEPSGVVTDWFAQDERGNVWWFGRAGSWRAGEDGAEAGIAMLARPRVGDGYRTGYLEGVVEDTARVV
SLDESAEVAAGSYDDLLLLEQQSALEPGATAELSYGRDVGLVEARLVSDSYRTVRLVRGPTPPAA

Sequences:

>Translated_225_residues
MRPLLLAAALAVLAGCGTASAPSPPAGVDELTIPTPSPDPGDFVATVDNPWFPLEAGDSWVYAVTDAEGAHRMRVTVETG
PEVAGVATTSRVTTEPSGVVTDWFAQDERGNVWWFGRAGSWRAGEDGAEAGIAMLARPRVGDGYRTGYLEGVVEDTARVV
SLDESAEVAAGSYDDLLLLEQQSALEPGATAELSYGRDVGLVEARLVSDSYRTVRLVRGPTPPAA
>Mature_225_residues
MRPLLLAAALAVLAGCGTASAPSPPAGVDELTIPTPSPDPGDFVATVDNPWFPLEAGDSWVYAVTDAEGAHRMRVTVETG
PEVAGVATTSRVTTEPSGVVTDWFAQDERGNVWWFGRAGSWRAGEDGAEAGIAMLARPRVGDGYRTGYLEGVVEDTARVV
SLDESAEVAAGSYDDLLLLEQQSALEPGATAELSYGRDVGLVEARLVSDSYRTVRLVRGPTPPAA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23572; Mature: 23572

Theoretical pI: Translated: 4.04; Mature: 4.04

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRPLLLAAALAVLAGCGTASAPSPPAGVDELTIPTPSPDPGDFVATVDNPWFPLEAGDSW
CCHHHHHHHHHHHHCCCCCCCCCCCCCCCEEECCCCCCCCCCEEEECCCCEEEEECCCCE
VYAVTDAEGAHRMRVTVETGPEVAGVATTSRVTTEPSGVVTDWFAQDERGNVWWFGRAGS
EEEEECCCCCEEEEEEEECCCCEEEEEECCEEEECCCCCEEEEECCCCCCCEEEEECCCC
WRAGEDGAEAGIAMLARPRVGDGYRTGYLEGVVEDTARVVSLDESAEVAAGSYDDLLLLE
CCCCCCCHHCCEEEEECCCCCCCCCCHHHHHHHHHHEEEEECCCCCCCCCCCCCCEEEEE
QQSALEPGATAELSYGRDVGLVEARLVSDSYRTVRLVRGPTPPAA
CCCCCCCCCCEEECCCCCCCEEEEEEECCCCEEEEEEECCCCCCC
>Mature Secondary Structure
MRPLLLAAALAVLAGCGTASAPSPPAGVDELTIPTPSPDPGDFVATVDNPWFPLEAGDSW
CCHHHHHHHHHHHHCCCCCCCCCCCCCCCEEECCCCCCCCCCEEEECCCCEEEEECCCCE
VYAVTDAEGAHRMRVTVETGPEVAGVATTSRVTTEPSGVVTDWFAQDERGNVWWFGRAGS
EEEEECCCCCEEEEEEEECCCCEEEEEECCEEEECCCCCEEEEECCCCCCCEEEEECCCC
WRAGEDGAEAGIAMLARPRVGDGYRTGYLEGVVEDTARVVSLDESAEVAAGSYDDLLLLE
CCCCCCCHHCCEEEEECCCCCCCCCCHHHHHHHHHHEEEEECCCCCCCCCCCCCCEEEEE
QQSALEPGATAELSYGRDVGLVEARLVSDSYRTVRLVRGPTPPAA
CCCCCCCCCCEEECCCCCCCEEEEEEECCCCEEEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA