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The map label for this gene is abgA [C]

Identifier: 119717764

GI number: 119717764

Start: 3753530

End: 3754750

Strand: Reverse

Name: abgA [C]

Synonym: Noca_3542

Alternate gene names: 119717764

Gene position: 3754750-3753530 (Counterclockwise)

Preceding gene: 119717765

Following gene: 119717763

Centisome position: 75.31

GC content: 74.04

Gene sequence:

>1221_bases
ATGCCCGAGGACGAGCCCACTCCGCCGCCGACGCGCGTCGACTCGCTGATCGAGACGACCGTCGGCGAGTCCCACGACGA
GCTGATCGCCCTGCGGCGCGACCTGCACGCCCACCCGGAGCTCTCCTGGCGCGAGCTGCGCACCACCGCCCTGGTCGCCG
CGCGGCTGCGCCGCAGCGGCTGGGGGGTGACCGAGCTCCCGCGCAGCGGGCTGCTGGCCGAGATCGGCACGGTCGGCCCG
GTCGTCGCGCTGCGGGCCGACCTCGATGCGCTCCCGGTGGCCGACCTCACCGACGACCCCTGGTCGAGCACGGTCGAGGG
CGTGACCCACGCCTGCGGCCACGACGTGCACACCACGTCCCTGGTCGGCGCCGCGCTCGCCCTCTCGCGGCTGCACGCCG
AGGGACTGCTGCCCGGCCGGGTGCGGCTGCTCTTCCAGCCGGCCGAGGAGGTGATGCCCGGCGGTGCGCTCTCCCTGATC
GAGCTCGGCGCCCTCGACGAGGTCACCCAGCTCTTCGGCCTGCACTGCGATCCCAGCCTGGACGTCGGCCGGGTCGGGCT
GCGCGAGGGCCCGATCACCGGCGCGGCCGACCACCTCGAGGTGACGCTGACCGGCTCCGGCGGGCACACCTCCCGCCCGC
ACCTGACCGAGGACCTCACCTACGCGCTCGGGAAGGTGGTCACCGAGCTGCCCTCGATCCTGTCCCGGCGGCTCGACCCG
CGCGCGGGCGTCAGCGTGGTGTGGGGCGTGGTGCGCGCCGGATCCGCCCACAACGTCATCCCCGCGACCGGCCGGATCGG
TGGCACCGTGCGGATGCTCGACGCGATCGCCTGGTCGGAGGCGGAGAAGCTGGTGCCGGTGCTGGTCGAGCAGATCGTCG
CGCCGTACGGCGTGCACGCGCAGGTCGACTACCAGCGCGGCGTGCCGCCGGTCGTCAACGACGTCGAGTCGATCGTGCTG
CTCGGCCACGCGGTCGAACGGGTGGTCGGGCAGGTTGGGCACGTTCCCACCCAGCAGAGCCTCGGCGGCGAGGACTTCGG
CTGGTACCTCGACCGGGTGCCGGGCGCGATGGGCCGGCTCGGCACGCGGACGCCAGGCGGTCCGACGTACGACCTGCATC
AGGGGAACCTGCGCGTCGACGAGCGCGCGGTGGCGATCGGCGCGAAGGTGCTGGCGCACGTCGCGGCAGAGTCCTTGGTC
ACCTCGATCGGGGACCTTTAA

Upstream 100 bases:

>100_bases
GTCGCGGCCGACCGGATCCTGACCGCCTTCGACGAGAGTCGCTGACCGCCGCGAGACACGATGCGGCGGGCGAACGGCAG
GTGAACTAACCTCGAGTGCG

Downstream 100 bases:

>100_bases
GAGGAATCTCGTGCCGTCTGGCATCGACTCGATAACAACTTCGTGATGTGGCTGTGACGGCCGGACGCAGGCCCTAGTGT
GGCCGGTGTTTCGCGCCCGG

Product: amidohydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 406; Mature: 405

Protein sequence:

>406_residues
MPEDEPTPPPTRVDSLIETTVGESHDELIALRRDLHAHPELSWRELRTTALVAARLRRSGWGVTELPRSGLLAEIGTVGP
VVALRADLDALPVADLTDDPWSSTVEGVTHACGHDVHTTSLVGAALALSRLHAEGLLPGRVRLLFQPAEEVMPGGALSLI
ELGALDEVTQLFGLHCDPSLDVGRVGLREGPITGAADHLEVTLTGSGGHTSRPHLTEDLTYALGKVVTELPSILSRRLDP
RAGVSVVWGVVRAGSAHNVIPATGRIGGTVRMLDAIAWSEAEKLVPVLVEQIVAPYGVHAQVDYQRGVPPVVNDVESIVL
LGHAVERVVGQVGHVPTQQSLGGEDFGWYLDRVPGAMGRLGTRTPGGPTYDLHQGNLRVDERAVAIGAKVLAHVAAESLV
TSIGDL

Sequences:

>Translated_406_residues
MPEDEPTPPPTRVDSLIETTVGESHDELIALRRDLHAHPELSWRELRTTALVAARLRRSGWGVTELPRSGLLAEIGTVGP
VVALRADLDALPVADLTDDPWSSTVEGVTHACGHDVHTTSLVGAALALSRLHAEGLLPGRVRLLFQPAEEVMPGGALSLI
ELGALDEVTQLFGLHCDPSLDVGRVGLREGPITGAADHLEVTLTGSGGHTSRPHLTEDLTYALGKVVTELPSILSRRLDP
RAGVSVVWGVVRAGSAHNVIPATGRIGGTVRMLDAIAWSEAEKLVPVLVEQIVAPYGVHAQVDYQRGVPPVVNDVESIVL
LGHAVERVVGQVGHVPTQQSLGGEDFGWYLDRVPGAMGRLGTRTPGGPTYDLHQGNLRVDERAVAIGAKVLAHVAAESLV
TSIGDL
>Mature_405_residues
PEDEPTPPPTRVDSLIETTVGESHDELIALRRDLHAHPELSWRELRTTALVAARLRRSGWGVTELPRSGLLAEIGTVGPV
VALRADLDALPVADLTDDPWSSTVEGVTHACGHDVHTTSLVGAALALSRLHAEGLLPGRVRLLFQPAEEVMPGGALSLIE
LGALDEVTQLFGLHCDPSLDVGRVGLREGPITGAADHLEVTLTGSGGHTSRPHLTEDLTYALGKVVTELPSILSRRLDPR
AGVSVVWGVVRAGSAHNVIPATGRIGGTVRMLDAIAWSEAEKLVPVLVEQIVAPYGVHAQVDYQRGVPPVVNDVESIVLL
GHAVERVVGQVGHVPTQQSLGGEDFGWYLDRVPGAMGRLGTRTPGGPTYDLHQGNLRVDERAVAIGAKVLAHVAAESLVT
SIGDL

Specific function: ATP-dependent carboxylate-amine ligase [H]

COG id: COG1473

COG function: function code R; Metal-dependent amidase/aminoacylase/carboxypeptidase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: In the C-terminal section; belongs to the peptidase M20 family [H]

Homologues:

Organism=Escherichia coli, GI87081880, Length=438, Percent_Identity=24.8858447488584, Blast_Score=76, Evalue=5e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011793
- InterPro:   IPR006336
- InterPro:   IPR010168
- InterPro:   IPR002933
- InterPro:   IPR011650 [H]

Pfam domain/function: PF04107 GCS2; PF01546 Peptidase_M20 [H]

EC number: NA

Molecular weight: Translated: 42963; Mature: 42832

Theoretical pI: Translated: 5.24; Mature: 5.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPEDEPTPPPTRVDSLIETTVGESHDELIALRRDLHAHPELSWRELRTTALVAARLRRSG
CCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCC
WGVTELPRSGLLAEIGTVGPVVALRADLDALPVADLTDDPWSSTVEGVTHACGHDVHTTS
CCHHHCCCCCCHHHHCCCCCHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHH
LVGAALALSRLHAEGLLPGRVRLLFQPAEEVMPGGALSLIELGALDEVTQLFGLHCDPSL
HHHHHHHHHHHHHCCCCCCHHEEEECCHHHHCCCCCCHHHHHCCHHHHHHHHCCCCCCCC
DVGRVGLREGPITGAADHLEVTLTGSGGHTSRPHLTEDLTYALGKVVTELPSILSRRLDP
CCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCC
RAGVSVVWGVVRAGSAHNVIPATGRIGGTVRMLDAIAWSEAEKLVPVLVEQIVAPYGVHA
CCCHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEE
QVDYQRGVPPVVNDVESIVLLGHAVERVVGQVGHVPTQQSLGGEDFGWYLDRVPGAMGRL
EEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCHHHHHHHHCCCHHHCC
GTRTPGGPTYDLHQGNLRVDERAVAIGAKVLAHVAAESLVTSIGDL
CCCCCCCCEEECCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
PEDEPTPPPTRVDSLIETTVGESHDELIALRRDLHAHPELSWRELRTTALVAARLRRSG
CCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCC
WGVTELPRSGLLAEIGTVGPVVALRADLDALPVADLTDDPWSSTVEGVTHACGHDVHTTS
CCHHHCCCCCCHHHHCCCCCHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHH
LVGAALALSRLHAEGLLPGRVRLLFQPAEEVMPGGALSLIELGALDEVTQLFGLHCDPSL
HHHHHHHHHHHHHCCCCCCHHEEEECCHHHHCCCCCCHHHHHCCHHHHHHHHCCCCCCCC
DVGRVGLREGPITGAADHLEVTLTGSGGHTSRPHLTEDLTYALGKVVTELPSILSRRLDP
CCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCC
RAGVSVVWGVVRAGSAHNVIPATGRIGGTVRMLDAIAWSEAEKLVPVLVEQIVAPYGVHA
CCCHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEE
QVDYQRGVPPVVNDVESIVLLGHAVERVVGQVGHVPTQQSLGGEDFGWYLDRVPGAMGRL
EEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCHHHHHHHHCCCHHHCC
GTRTPGGPTYDLHQGNLRVDERAVAIGAKVLAHVAAESLVTSIGDL
CCCCCCCCEEECCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA