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The map label for this gene is yngJ [H]

Identifier: 119717728

GI number: 119717728

Start: 3713970

End: 3715169

Strand: Reverse

Name: yngJ [H]

Synonym: Noca_3506

Alternate gene names: 119717728

Gene position: 3715169-3713970 (Counterclockwise)

Preceding gene: 119717729

Following gene: 119717727

Centisome position: 74.51

GC content: 71.25

Gene sequence:

>1200_bases
ATGAGCGAGTCGTCGACCTACGAGCTGTCCCGCGAGCACGAGGAGTTCCGTCGCAGCGTCCGCGAGTTCGCGGAGGCCGA
GATCGGGCCGCACGCGGCGCAGTGGGACCGAGAGCACCACTTCCCGATCGACGTCGTGCGCAAGATGGGCGCTCTGGGGC
TCTTCGGCCTCACCGCCCCGGAGGAGTACGGCGGGGCCGGCGAGGACGGTGACTTCACCAGCCTGTGCGTGGCGATCGAG
GAGATCGGTCGCGTGGACCAGTCGCTGGGCATCACGCTCGAGGCCGCGGTCGGCCTCGGCATCAACCCGATCCTGGCCTA
CGGCACCGCCGACCAGCGGGACACCTGGCTCCCGGACCTGGTCTCCGGGGAGCGGCTCGCCGGGTTCGGGCTGACCGAGC
CGGGTGCGGGCTCCGACGCCGGCGCGACGAAGACCCGCGCCGTCCTCGAGAACGGTGAGTGGGTGGTCAACGGTTCCAAG
CAGTTCATCACCAACTCGGGCTCGGAGCTGACCAGCGTCGTGACCGTGACCGCGCGCACCGGGACCCGGGAGAACGGGTC
CGCCGAGATCAGCACGATCATGGTGCCGAGCGGGACGCCCGGCTTCACGGCCGAGAAGGCCTACGACAAGCTCGGCTGGC
ACGCCTCCGACACCCACCCGTTGAGCCTCGAGGACGTGCGGGTCCCCGAGGCCAACCTGCTCGGCGAGCGCGGCCGCGGC
TACGCCCAGTTCCTGGCGACGCTCGACGACGGGCGGGTCGCGATCGCCGCCCTCGCCGTGGGCTGCATCCAGGCGTGCCT
GGAGCTCAGCCTGGAGTACGCCGGCGAGCGGCAGACCTTCGGCGGCCCGATCGGACGCAAGCAGGGGGTGGCCTTCCAGA
TCGCCGACCTCGAGGTGATGCTGCACGCCAGCCGACTGCTCACCTACCGCGCCGCCGCGATGAAGGACAGCCAGCGCGAC
GGGGGCGGCGCCTCGATGAAGGAGTTCAAGCAGGCCGCCGCCGTCGCCAAGCTCTACGCGACCGAGTCGGCGGTGACCGC
CACCCGGATCGCCACCCAGGTCTTCGGCGGCTACGGCTTCATGGAGGAGTACCCCGTCGCCCGCTTCTACCGCGACGCCA
AGGTCCTCGAGATCGGCGAGGGCACCTCCGAGGTGCAGCGGCTGCTCATCGCCCGCGGGCTGGGCCTGCCCGTCGAATAG

Upstream 100 bases:

>100_bases
ATGGCTGCTCCTCCGTCCTACTGGGTGGGCGGGGCCGCGGCCGGCCGGGCCGCGGATCGATGGTTAACAATCGCTAACCG
GACGGGTTAGGGTGGCGGCC

Downstream 100 bases:

>100_bases
CCTCCGCGTCCCGGAGTTGGTCGGTCGACCGGTTAGCCTTGTCAACATGGGAGGCCGGTGGGAACGCGTCTTCACCGAGG
CGTACCGGTTCCTCGCTGTG

Product: butyryl-CoA dehydrogenase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 399; Mature: 398

Protein sequence:

>399_residues
MSESSTYELSREHEEFRRSVREFAEAEIGPHAAQWDREHHFPIDVVRKMGALGLFGLTAPEEYGGAGEDGDFTSLCVAIE
EIGRVDQSLGITLEAAVGLGINPILAYGTADQRDTWLPDLVSGERLAGFGLTEPGAGSDAGATKTRAVLENGEWVVNGSK
QFITNSGSELTSVVTVTARTGTRENGSAEISTIMVPSGTPGFTAEKAYDKLGWHASDTHPLSLEDVRVPEANLLGERGRG
YAQFLATLDDGRVAIAALAVGCIQACLELSLEYAGERQTFGGPIGRKQGVAFQIADLEVMLHASRLLTYRAAAMKDSQRD
GGGASMKEFKQAAAVAKLYATESAVTATRIATQVFGGYGFMEEYPVARFYRDAKVLEIGEGTSEVQRLLIARGLGLPVE

Sequences:

>Translated_399_residues
MSESSTYELSREHEEFRRSVREFAEAEIGPHAAQWDREHHFPIDVVRKMGALGLFGLTAPEEYGGAGEDGDFTSLCVAIE
EIGRVDQSLGITLEAAVGLGINPILAYGTADQRDTWLPDLVSGERLAGFGLTEPGAGSDAGATKTRAVLENGEWVVNGSK
QFITNSGSELTSVVTVTARTGTRENGSAEISTIMVPSGTPGFTAEKAYDKLGWHASDTHPLSLEDVRVPEANLLGERGRG
YAQFLATLDDGRVAIAALAVGCIQACLELSLEYAGERQTFGGPIGRKQGVAFQIADLEVMLHASRLLTYRAAAMKDSQRD
GGGASMKEFKQAAAVAKLYATESAVTATRIATQVFGGYGFMEEYPVARFYRDAKVLEIGEGTSEVQRLLIARGLGLPVE
>Mature_398_residues
SESSTYELSREHEEFRRSVREFAEAEIGPHAAQWDREHHFPIDVVRKMGALGLFGLTAPEEYGGAGEDGDFTSLCVAIEE
IGRVDQSLGITLEAAVGLGINPILAYGTADQRDTWLPDLVSGERLAGFGLTEPGAGSDAGATKTRAVLENGEWVVNGSKQ
FITNSGSELTSVVTVTARTGTRENGSAEISTIMVPSGTPGFTAEKAYDKLGWHASDTHPLSLEDVRVPEANLLGERGRGY
AQFLATLDDGRVAIAALAVGCIQACLELSLEYAGERQTFGGPIGRKQGVAFQIADLEVMLHASRLLTYRAAAMKDSQRDG
GGASMKEFKQAAAVAKLYATESAVTATRIATQVFGGYGFMEEYPVARFYRDAKVLEIGEGTSEVQRLLIARGLGLPVE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the acyl-CoA dehydrogenase family [H]

Homologues:

Organism=Homo sapiens, GI4557233, Length=386, Percent_Identity=42.2279792746114, Blast_Score=307, Evalue=1e-83,
Organism=Homo sapiens, GI4501859, Length=386, Percent_Identity=36.5284974093264, Blast_Score=229, Evalue=2e-60,
Organism=Homo sapiens, GI7656849, Length=386, Percent_Identity=33.6787564766839, Blast_Score=227, Evalue=1e-59,
Organism=Homo sapiens, GI226958412, Length=389, Percent_Identity=34.1902313624679, Blast_Score=224, Evalue=8e-59,
Organism=Homo sapiens, GI226958414, Length=349, Percent_Identity=35.243553008596, Blast_Score=208, Evalue=6e-54,
Organism=Homo sapiens, GI4557231, Length=387, Percent_Identity=32.5581395348837, Blast_Score=207, Evalue=2e-53,
Organism=Homo sapiens, GI4501857, Length=386, Percent_Identity=32.9015544041451, Blast_Score=207, Evalue=2e-53,
Organism=Homo sapiens, GI187960098, Length=387, Percent_Identity=32.5581395348837, Blast_Score=206, Evalue=2e-53,
Organism=Homo sapiens, GI21361497, Length=394, Percent_Identity=33.502538071066, Blast_Score=202, Evalue=5e-52,
Organism=Homo sapiens, GI4557235, Length=346, Percent_Identity=34.1040462427746, Blast_Score=179, Evalue=4e-45,
Organism=Homo sapiens, GI76496475, Length=346, Percent_Identity=34.1040462427746, Blast_Score=179, Evalue=4e-45,
Organism=Homo sapiens, GI4503943, Length=389, Percent_Identity=28.5347043701799, Blast_Score=144, Evalue=1e-34,
Organism=Homo sapiens, GI7669494, Length=363, Percent_Identity=29.2011019283747, Blast_Score=134, Evalue=2e-31,
Organism=Homo sapiens, GI38505218, Length=357, Percent_Identity=28.0112044817927, Blast_Score=115, Evalue=9e-26,
Organism=Homo sapiens, GI211971008, Length=385, Percent_Identity=27.7922077922078, Blast_Score=113, Evalue=3e-25,
Organism=Homo sapiens, GI48976061, Length=385, Percent_Identity=28.051948051948, Blast_Score=113, Evalue=3e-25,
Organism=Escherichia coli, GI87081958, Length=390, Percent_Identity=27.9487179487179, Blast_Score=156, Evalue=2e-39,
Organism=Escherichia coli, GI1786223, Length=389, Percent_Identity=29.0488431876607, Blast_Score=155, Evalue=3e-39,
Organism=Escherichia coli, GI87081702, Length=397, Percent_Identity=25.1889168765743, Blast_Score=82, Evalue=6e-17,
Organism=Escherichia coli, GI87082384, Length=276, Percent_Identity=26.0869565217391, Blast_Score=73, Evalue=4e-14,
Organism=Caenorhabditis elegans, GI17534899, Length=396, Percent_Identity=37.6262626262626, Blast_Score=248, Evalue=3e-66,
Organism=Caenorhabditis elegans, GI17570075, Length=394, Percent_Identity=34.2639593908629, Blast_Score=246, Evalue=2e-65,
Organism=Caenorhabditis elegans, GI17569725, Length=394, Percent_Identity=35.2791878172589, Blast_Score=231, Evalue=7e-61,
Organism=Caenorhabditis elegans, GI17538396, Length=396, Percent_Identity=34.5959595959596, Blast_Score=230, Evalue=1e-60,
Organism=Caenorhabditis elegans, GI17533517, Length=390, Percent_Identity=33.8461538461538, Blast_Score=228, Evalue=6e-60,
Organism=Caenorhabditis elegans, GI17506239, Length=377, Percent_Identity=35.8090185676393, Blast_Score=219, Evalue=3e-57,
Organism=Caenorhabditis elegans, GI17508101, Length=389, Percent_Identity=34.9614395886889, Blast_Score=217, Evalue=1e-56,
Organism=Caenorhabditis elegans, GI17551932, Length=383, Percent_Identity=31.8537859007833, Blast_Score=183, Evalue=1e-46,
Organism=Caenorhabditis elegans, GI17505929, Length=401, Percent_Identity=31.1720698254364, Blast_Score=182, Evalue=3e-46,
Organism=Caenorhabditis elegans, GI71985184, Length=361, Percent_Identity=31.8559556786704, Blast_Score=177, Evalue=9e-45,
Organism=Caenorhabditis elegans, GI71990804, Length=306, Percent_Identity=36.6013071895425, Blast_Score=173, Evalue=1e-43,
Organism=Caenorhabditis elegans, GI17534353, Length=390, Percent_Identity=29.7435897435897, Blast_Score=171, Evalue=8e-43,
Organism=Caenorhabditis elegans, GI32563615, Length=253, Percent_Identity=35.5731225296443, Blast_Score=144, Evalue=7e-35,
Organism=Caenorhabditis elegans, GI71985192, Length=308, Percent_Identity=29.8701298701299, Blast_Score=139, Evalue=4e-33,
Organism=Caenorhabditis elegans, GI71982178, Length=274, Percent_Identity=27.7372262773723, Blast_Score=119, Evalue=3e-27,
Organism=Caenorhabditis elegans, GI17562446, Length=375, Percent_Identity=26.1333333333333, Blast_Score=100, Evalue=2e-21,
Organism=Caenorhabditis elegans, GI17531909, Length=249, Percent_Identity=29.3172690763052, Blast_Score=93, Evalue=3e-19,
Organism=Caenorhabditis elegans, GI17531913, Length=184, Percent_Identity=32.0652173913043, Blast_Score=85, Evalue=7e-17,
Organism=Caenorhabditis elegans, GI86563381, Length=276, Percent_Identity=27.1739130434783, Blast_Score=71, Evalue=1e-12,
Organism=Caenorhabditis elegans, GI86563383, Length=276, Percent_Identity=27.1739130434783, Blast_Score=70, Evalue=1e-12,
Organism=Drosophila melanogaster, GI21356377, Length=388, Percent_Identity=39.9484536082474, Blast_Score=287, Evalue=8e-78,
Organism=Drosophila melanogaster, GI24646207, Length=386, Percent_Identity=38.3419689119171, Blast_Score=261, Evalue=7e-70,
Organism=Drosophila melanogaster, GI24660351, Length=390, Percent_Identity=35.8974358974359, Blast_Score=237, Evalue=9e-63,
Organism=Drosophila melanogaster, GI24666513, Length=386, Percent_Identity=34.9740932642487, Blast_Score=218, Evalue=8e-57,
Organism=Drosophila melanogaster, GI21355753, Length=394, Percent_Identity=33.756345177665, Blast_Score=216, Evalue=2e-56,
Organism=Drosophila melanogaster, GI281363737, Length=347, Percent_Identity=32.5648414985591, Blast_Score=187, Evalue=1e-47,
Organism=Drosophila melanogaster, GI19920834, Length=397, Percent_Identity=25.9445843828715, Blast_Score=132, Evalue=4e-31,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006089
- InterPro:   IPR006092
- InterPro:   IPR006090
- InterPro:   IPR006091
- InterPro:   IPR009075
- InterPro:   IPR013786
- InterPro:   IPR009100 [H]

Pfam domain/function: PF00441 Acyl-CoA_dh_1; PF02770 Acyl-CoA_dh_M; PF02771 Acyl-CoA_dh_N [H]

EC number: NA

Molecular weight: Translated: 42673; Mature: 42542

Theoretical pI: Translated: 4.61; Mature: 4.61

Prosite motif: PS00072 ACYL_COA_DH_1 ; PS00073 ACYL_COA_DH_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSESSTYELSREHEEFRRSVREFAEAEIGPHAAQWDREHHFPIDVVRKMGALGLFGLTAP
CCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCCCCCHHHHHHHCCCCEECCCCC
EEYGGAGEDGDFTSLCVAIEEIGRVDQSLGITLEAAVGLGINPILAYGTADQRDTWLPDL
HHHCCCCCCCCHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCEEEECCCCCCCCCCCHH
VSGERLAGFGLTEPGAGSDAGATKTRAVLENGEWVVNGSKQFITNSGSELTSVVTVTART
HCCCCEECCCCCCCCCCCCCCCHHHHHHHCCCCEEECCCHHEECCCCCCEEEEEEEEECC
GTRENGSAEISTIMVPSGTPGFTAEKAYDKLGWHASDTHPLSLEDVRVPEANLLGERGRG
CCCCCCCCEEEEEEECCCCCCCCHHHHHHHHCCCCCCCCCCCHHCCCCCCHHHCCCCCCC
YAQFLATLDDGRVAIAALAVGCIQACLELSLEYAGERQTFGGPIGRKQGVAFQIADLEVM
HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEHHHHH
LHASRLLTYRAAAMKDSQRDGGGASMKEFKQAAAVAKLYATESAVTATRIATQVFGGYGF
HHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
MEEYPVARFYRDAKVLEIGEGTSEVQRLLIARGLGLPVE
HHHCCHHHHHCCCEEEEECCCHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
SESSTYELSREHEEFRRSVREFAEAEIGPHAAQWDREHHFPIDVVRKMGALGLFGLTAP
CCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCCCCCHHHHHHHCCCCEECCCCC
EEYGGAGEDGDFTSLCVAIEEIGRVDQSLGITLEAAVGLGINPILAYGTADQRDTWLPDL
HHHCCCCCCCCHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCEEEECCCCCCCCCCCHH
VSGERLAGFGLTEPGAGSDAGATKTRAVLENGEWVVNGSKQFITNSGSELTSVVTVTART
HCCCCEECCCCCCCCCCCCCCCHHHHHHHCCCCEEECCCHHEECCCCCCEEEEEEEEECC
GTRENGSAEISTIMVPSGTPGFTAEKAYDKLGWHASDTHPLSLEDVRVPEANLLGERGRG
CCCCCCCCEEEEEEECCCCCCCCHHHHHHHHCCCCCCCCCCCHHCCCCCCHHHCCCCCCC
YAQFLATLDDGRVAIAALAVGCIQACLELSLEYAGERQTFGGPIGRKQGVAFQIADLEVM
HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEHHHHH
LHASRLLTYRAAAMKDSQRDGGGASMKEFKQAAAVAKLYATESAVTATRIATQVFGGYGF
HHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
MEEYPVARFYRDAKVLEIGEGTSEVQRLLIARGLGLPVE
HHHCCHHHHHCCCEEEEECCCHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9387222; 9384377 [H]