| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is 119717729
Identifier: 119717729
GI number: 119717729
Start: 3715397
End: 3715678
Strand: Reverse
Name: 119717729
Synonym: Noca_3507
Alternate gene names: NA
Gene position: 3715678-3715397 (Counterclockwise)
Preceding gene: 119717730
Following gene: 119717728
Centisome position: 74.52
GC content: 70.92
Gene sequence:
>282_bases ATGGGGACCACCGCCGCACTCACGTCGATCGCGGCCGCGCTCGCGACCGACGTGGTGGTGCCAGACGACTGGGGGTGCTG CGGCTTCGCCGGTGATCGCGGCATGCTGCATCCGGAGCTGACGGCGAGCGCGACCGCCGCCGAGGCGGCGGAGGTGCGCC GAGCAGAGCACGACCTTTACCTGTCCTCGAACCGGACCTGTGAACTCGGGCTGAGCCGAGCGACCGGCATGAGGTACGAG CACGCGCTCCAAGCGCTCGAGCGTGCCACCCGAGCTGGGTGA
Upstream 100 bases:
>100_bases CCCCGAGCAGCGCCTCGTCGACCTGACGGCCGACCTGCTGCACACCGGCCTGGTCCTGTCCTGAACCGGCGCCGCGGCCC GGACCTTCACGACGACTCGG
Downstream 100 bases:
>100_bases AGGCTCGACCCGTGGACTACCGGGAGGACTCGTTTCCGGGCCCCGGTGGGTTGTGCCGCGGCGGGGATGGCCGCTCTCGC CGGGTGGGTAGCCGGCGGTT
Product: hypothetical protein
Products: NA
Alternate protein names: D-Lactate Dehydrogenase; FAD Linked Oxidase Domain-Containing Protein; FAD Linked Oxidase Domain Protein; FAD Linked Oxidase-Like Protein; FAD Linked Oxidase; FAD/FMN-Containing Dehydrogenase; Oxidoreductase D-Lactate Dehydrogenase
Number of amino acids: Translated: 93; Mature: 92
Protein sequence:
>93_residues MGTTAALTSIAAALATDVVVPDDWGCCGFAGDRGMLHPELTASATAAEAAEVRRAEHDLYLSSNRTCELGLSRATGMRYE HALQALERATRAG
Sequences:
>Translated_93_residues MGTTAALTSIAAALATDVVVPDDWGCCGFAGDRGMLHPELTASATAAEAAEVRRAEHDLYLSSNRTCELGLSRATGMRYE HALQALERATRAG >Mature_92_residues GTTAALTSIAAALATDVVVPDDWGCCGFAGDRGMLHPELTASATAAEAAEVRRAEHDLYLSSNRTCELGLSRATGMRYEH ALQALERATRAG
Specific function: Unknown
COG id: COG0247
COG function: function code C; Fe-S oxidoreductase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9751; Mature: 9620
Theoretical pI: Translated: 5.04; Mature: 5.04
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.2 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 6.5 %Cys+Met (Translated Protein) 3.3 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGTTAALTSIAAALATDVVVPDDWGCCGFAGDRGMLHPELTASATAAEAAEVRRAEHDLY CCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCEE LSSNRTCELGLSRATGMRYEHALQALERATRAG ECCCCEEECCCCCCCCCCHHHHHHHHHHHHCCC >Mature Secondary Structure GTTAALTSIAAALATDVVVPDDWGCCGFAGDRGMLHPELTASATAAEAAEVRRAEHDLY CCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCEE LSSNRTCELGLSRATGMRYEHALQALERATRAG ECCCCEEECCCCCCCCCCHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA