| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is 119717644
Identifier: 119717644
GI number: 119717644
Start: 3626712
End: 3627761
Strand: Reverse
Name: 119717644
Synonym: Noca_3422
Alternate gene names: NA
Gene position: 3627761-3626712 (Counterclockwise)
Preceding gene: 119717645
Following gene: 119717641
Centisome position: 72.76
GC content: 75.9
Gene sequence:
>1050_bases ATGGCCGACGTGCAGGTCTCGCAGCCGGCCGCCGGGGTCGGTCGGCTCGGCACGGTCGCGGCCTGGGTGTCGGCGGCGGC GTGCCTGCCCTACCTGTTCCTGAAGGTGGCCTGGACCCTCGACCAGCCGGTGGGTCTCACCGACCGGTCGGTGCTGCACA GCGGCGGGTGGGTCGCCGGGAACGCGGTGATGGCCGCCGTCCAGCTCGTGGCGGTGGTCCTGGTGCTGGCGCTGGTCCGG CCGTCGTCGCGGAGGGTGCCGGCCTGGATCCTGCTCCTCCCGGTGTGGGTCGGGACCGGCCTGCTGTTCCAGGTCGTCGT CGGCTCGGCACTGACCGTGCTCACCTCGACGGCGGCGCAGGACTCCGGCACCGAGCTGGGCGGCATCGCCCCCTGGGTGT ACGTGCTCGTCTATGCGTCCTTCGCGGTCCAGGGGGTTGCCCTGGCCGTGGCGTTCGGCTGTCACGTCCGCGCCCGCTGG GGCGGCCTGCTGAACAGGCGCACCGGCGAGGTCGTCGCGCTGCCACCGGCGCAGCAGGCCCGCCTCGGCCGGCTCGCCGC GCTCGCCGCCGTCGTGGCGGTGGCCGTGGCCCTCGTCTGCGTCTACTGGGCGGCCGGTGGCTCCGCCGGGCTCTCCGACG CCCGGGCCCACGACACCGCCGGGATGCAGGCGGCGCGCGCGGCGGGCGCCCTCGTCGCCGCGGCCGGGGTGCTCGGTCTC GCCGGCCGATGGGGCCGCGAGCGGGCGCTCTGGCTGCCCGCCGCACTCACCTGGATCGGCTCGGGCGCCCTCGTCGTCTT CGACGCTCTCACGGTCCTGGTCAACCGGCTGGTCTACCTCTTCGCGACCCCACCGCCCGAGGCGGACTGGGCCCCGATCG ACACGGTGCTGGTCGTCAAGGTGCTCGTCGGCGTCCTGGTCGGTGTGGTCGGCGTGCTGGCGATCAGCCCTGGGTCGGCA GCGGCGGGGGCGGGTCGACGTACGCCGGCAGCTCGCCGGTCGCGTCGCTCTCCTCGGGGGGCAGGATCGGGTCGGGGACG CCGGCGGTGA
Upstream 100 bases:
>100_bases CCTTGAGGCCCCGGTAGGTAGAACTGCCGCTCCCTCGGGGACCTTCGACGGTGGCGCCCGGTCTCGCGGAGGCGTAGAGC GGGGCTGGGGAGCGCTGGGG
Downstream 100 bases:
>100_bases TCGTGCTGCCGTCGGCGCGGGTGCCGCCGATGATCGGGTGCTCGCCGAGCAGCCCGTCGATCCGGTCGCCCTGGTCGGGC AGGTCGACGACCAGGGGAGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 349; Mature: 348
Protein sequence:
>349_residues MADVQVSQPAAGVGRLGTVAAWVSAAACLPYLFLKVAWTLDQPVGLTDRSVLHSGGWVAGNAVMAAVQLVAVVLVLALVR PSSRRVPAWILLLPVWVGTGLLFQVVVGSALTVLTSTAAQDSGTELGGIAPWVYVLVYASFAVQGVALAVAFGCHVRARW GGLLNRRTGEVVALPPAQQARLGRLAALAAVVAVAVALVCVYWAAGGSAGLSDARAHDTAGMQAARAAGALVAAAGVLGL AGRWGRERALWLPAALTWIGSGALVVFDALTVLVNRLVYLFATPPPEADWAPIDTVLVVKVLVGVLVGVVGVLAISPGSA AAGAGRRTPAARRSRRSPRGAGSGRGRRR
Sequences:
>Translated_349_residues MADVQVSQPAAGVGRLGTVAAWVSAAACLPYLFLKVAWTLDQPVGLTDRSVLHSGGWVAGNAVMAAVQLVAVVLVLALVR PSSRRVPAWILLLPVWVGTGLLFQVVVGSALTVLTSTAAQDSGTELGGIAPWVYVLVYASFAVQGVALAVAFGCHVRARW GGLLNRRTGEVVALPPAQQARLGRLAALAAVVAVAVALVCVYWAAGGSAGLSDARAHDTAGMQAARAAGALVAAAGVLGL AGRWGRERALWLPAALTWIGSGALVVFDALTVLVNRLVYLFATPPPEADWAPIDTVLVVKVLVGVLVGVVGVLAISPGSA AAGAGRRTPAARRSRRSPRGAGSGRGRRR >Mature_348_residues ADVQVSQPAAGVGRLGTVAAWVSAAACLPYLFLKVAWTLDQPVGLTDRSVLHSGGWVAGNAVMAAVQLVAVVLVLALVRP SSRRVPAWILLLPVWVGTGLLFQVVVGSALTVLTSTAAQDSGTELGGIAPWVYVLVYASFAVQGVALAVAFGCHVRARWG GLLNRRTGEVVALPPAQQARLGRLAALAAVVAVAVALVCVYWAAGGSAGLSDARAHDTAGMQAARAAGALVAAAGVLGLA GRWGRERALWLPAALTWIGSGALVVFDALTVLVNRLVYLFATPPPEADWAPIDTVLVVKVLVGVLVGVVGVLAISPGSAA AGAGRRTPAARRSRRSPRGAGSGRGRRR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35648; Mature: 35517
Theoretical pI: Translated: 11.95; Mature: 11.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MADVQVSQPAAGVGRLGTVAAWVSAAACLPYLFLKVAWTLDQPVGLTDRSVLHSGGWVAG CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCCCHH NAVMAAVQLVAVVLVLALVRPSSRRVPAWILLLPVWVGTGLLFQVVVGSALTVLTSTAAQ HHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC DSGTELGGIAPWVYVLVYASFAVQGVALAVAFGCHVRARWGGLLNRRTGEVVALPPAQQA CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCCCCEEECCCHHHH RLGRLAALAAVVAVAVALVCVYWAAGGSAGLSDARAHDTAGMQAARAAGALVAAAGVLGL HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH AGRWGRERALWLPAALTWIGSGALVVFDALTVLVNRLVYLFATPPPEADWAPIDTVLVVK CCCCCCCCEEEHHHHHHHHCCCHHHHHHHHHHHHHHHHEEEECCCCCCCCCCHHHHHHHH VLVGVLVGVVGVLAISPGSAAAGAGRRTPAARRSRRSPRGAGSGRGRRR HHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCC >Mature Secondary Structure ADVQVSQPAAGVGRLGTVAAWVSAAACLPYLFLKVAWTLDQPVGLTDRSVLHSGGWVAG CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCCCHH NAVMAAVQLVAVVLVLALVRPSSRRVPAWILLLPVWVGTGLLFQVVVGSALTVLTSTAAQ HHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC DSGTELGGIAPWVYVLVYASFAVQGVALAVAFGCHVRARWGGLLNRRTGEVVALPPAQQA CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCCCCEEECCCHHHH RLGRLAALAAVVAVAVALVCVYWAAGGSAGLSDARAHDTAGMQAARAAGALVAAAGVLGL HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH AGRWGRERALWLPAALTWIGSGALVVFDALTVLVNRLVYLFATPPPEADWAPIDTVLVVK CCCCCCCCEEEHHHHHHHHCCCHHHHHHHHHHHHHHHHEEEECCCCCCCCCCHHHHHHHH VLVGVLVGVVGVLAISPGSAAAGAGRRTPAARRSRRSPRGAGSGRGRRR HHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA