| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is 119717599
Identifier: 119717599
GI number: 119717599
Start: 3575980
End: 3578160
Strand: Reverse
Name: 119717599
Synonym: Noca_3376
Alternate gene names: NA
Gene position: 3578160-3575980 (Counterclockwise)
Preceding gene: 119717601
Following gene: 119717598
Centisome position: 71.77
GC content: 74.42
Gene sequence:
>2181_bases GTGACGAACTACGGCCATCGGATCGGGTTCGGCGTCGAGGTCACCGGAGCCGGCGAGGCGCCGGAGGACGCGGTCGCGCT GGCGGTGCTGGTCGAGGACCTCGGCTACGACCTCGTGACCTTCCCGGACCGGGGCGGTGCGGACGCCTCGACCCTCGCGG CGTGGGCGGCCGCACGGACCAGCAGGGCCCAGGTCGCCGCATCGCGGCTGGACGCCACGGCGCGACCGGCGTCCATCGTC GCGCGAGGCGCGGGGAGCCTCCAGCTGCTGTCGGGTGGCCGGGCCCTGCTGCTGCTCGGATCGGAGTCGGCGGCTGCGAA TCTCGACGCGCTCGAGGAGGCCGTGGCGGTGGTCCGTTCGCTGCTGGACACCTCCCGACCTCGGGTCAGCTCGGCCGGGA CCCGCCACCGTCTCGCCGATGCCGAGCCAGGTCCTGGTCTGGAGCTCGCCGTCCCGCTGTGGCTGCACGGGTCGGACTCC ACCGCCGCCGCCCTGGCCGGCCGGCTCGCCGACGGGTGGGTCGTGGACCTCGACGAGGTCGGCGTCGAGGGACTCGCGGC GCTGAGCGCGGTGCTGGACCGGGCCGCGGTCGATGCCGGCCGCGACGTCCGCGAGGTACGACGGTCCGTGGCACTCGCCC CCGGTGACCTGCCCGACGCGGACGCCCTGACCGCACTGGTGGTCGACCACGGCGTGAGCTCCGTGCTGCTCCGCGTCGGG ACCGAGGACGAGCCCCTGCTGCGCACCTTCATCGACACGGTCGCCCCTGCGGTCCGCGACGGCGCCGAGCGCGCGCTGCC ACCGGGTGCCCTCTCGTCGCGGCAGGTGCGACGCGCCGACGTTCGGGCGCGGCGCCGACCGGACATCTCCTATGACGACG TCCCCGACGAGCTGGCCGAGACCGCCGTCGAGCCCGGCGACGCCGCGTTCGCCAAGGTGCGCTCGACGTACCTGCGCGGC GGCAACCCCGGCCTGGTGCTGCGGCCCCGCACCGCCGCGGCGGTGGCCAGCGCCGTGGGCTTCGCCCGCGTGCACCGGCA TCTGCCCCTGGGGATCCGCAGCGGCGGGCACGGGATCAGCGGCCGCTCGACCAACGACGGCGGCCTGGTCATCGACGTCG GCGCGCTCGACGACGTCACCGTGCTGGACGAGGCAGCCCGGCTGGTGCGGATCGGGCCCGGCGCCCGCTGGCGCGACGTC GCCACGGCGCTGCAGCCCCACGGCTGGGCGCTCAGCTCCGGTGACTACGGCGGGGTGGGCGTCGGCGGGCTCGCCACCGC GGGCGGGATCGGGTTCCTCTCCCGCAAGCACGGCCTGACCATCGACCACCTGCGAGCGGTCGAGATGGTGCTCGCCGACG GCAGCCTCGTGCGGGCCAGCGCGACCGAGAACGCCGAGCTGTTCTGGGCGGTCCGCGGCGCCGGGGCGAACTTCGGGATC GCGGTCGCGTTCGAGTTCGTCGTCGACGAGGTCGCCGAGGTGGGCTGGGCCCAGCTCGCCTTCCAGGCCCCCGACCCGGC GGCGTACCTCGAGGGGTTCGCCCGGGTCGTCGCCGAGACGCCACGCGAGACGACGCCGTTCCTGATCCTCGGCCAGGGCG TCGCGCAGGTGATGGCGATGGTCGACTCCGCCGACCCCGAGGTGATCGTCGGCCAGCTCCAGCCGTTCGCCGAGATCGCG CCGCTGGTGCAGCAGCAGGTCGTGATCGCGCCGTACGCGGCCGTCATGAACATGTTCCCCGAGACCCCCCACAACGGGTA CGGCGAACCGGTCTCCCGGTCGGCGTTCACCCGCGAGATCACCCCGGCCTTCGCCTCCGCGTCCGCCGACCTGATCCGGA GCGGAGCGTCCCACTGGTACCAGATCCGCACCGTCGGCGGGGCCGTGGCGGACGTCGCGCCGGACGCCACCGCGTACGCC CATCGCGACGCCAACTTCGCCCTCGCCGTGATGGGCGGCAACGCCCAGCGCCTGGACCGCTGGTTCGAGCCGGTACGCCG CCACTCCGACGGCCTCTACCTGAGCTTCGAGAGCGACCGTCACCCGGACCGGATCGCCGATGCGTTCCCGCCGGCCACCC TGGACCGGTTGCGCCGGCTCAAGGCGGAGGTCGACCCGCACAACCTGTTCCAGGACAACTTCAACATCGCCCCCACCCAC GACACCAGGACCGCCTCATGA
Upstream 100 bases:
>100_bases GCCGTGCGCGGTGCGGCGTGCCACGAGGCAGGTTGATACATCAACCTGCGCGCGATACCTTGGTTGACATGTCAACCAAG TGGGTGCTCGGAGGATCACG
Downstream 100 bases:
>100_bases ACAGCAGCACGAGCACCGACTACGGCCACGACCTGATCTTCGGCACCTTCGTGACCCCGACCAACCACCCCGTCCACCAC GCCGTCGAGCAGGCCGTCGT
Product: FAD linked oxidase domain-containing protein
Products: NA
Alternate protein names: 6-HDNO [H]
Number of amino acids: Translated: 726; Mature: 725
Protein sequence:
>726_residues MTNYGHRIGFGVEVTGAGEAPEDAVALAVLVEDLGYDLVTFPDRGGADASTLAAWAAARTSRAQVAASRLDATARPASIV ARGAGSLQLLSGGRALLLLGSESAAANLDALEEAVAVVRSLLDTSRPRVSSAGTRHRLADAEPGPGLELAVPLWLHGSDS TAAALAGRLADGWVVDLDEVGVEGLAALSAVLDRAAVDAGRDVREVRRSVALAPGDLPDADALTALVVDHGVSSVLLRVG TEDEPLLRTFIDTVAPAVRDGAERALPPGALSSRQVRRADVRARRRPDISYDDVPDELAETAVEPGDAAFAKVRSTYLRG GNPGLVLRPRTAAAVASAVGFARVHRHLPLGIRSGGHGISGRSTNDGGLVIDVGALDDVTVLDEAARLVRIGPGARWRDV ATALQPHGWALSSGDYGGVGVGGLATAGGIGFLSRKHGLTIDHLRAVEMVLADGSLVRASATENAELFWAVRGAGANFGI AVAFEFVVDEVAEVGWAQLAFQAPDPAAYLEGFARVVAETPRETTPFLILGQGVAQVMAMVDSADPEVIVGQLQPFAEIA PLVQQQVVIAPYAAVMNMFPETPHNGYGEPVSRSAFTREITPAFASASADLIRSGASHWYQIRTVGGAVADVAPDATAYA HRDANFALAVMGGNAQRLDRWFEPVRRHSDGLYLSFESDRHPDRIADAFPPATLDRLRRLKAEVDPHNLFQDNFNIAPTH DTRTAS
Sequences:
>Translated_726_residues MTNYGHRIGFGVEVTGAGEAPEDAVALAVLVEDLGYDLVTFPDRGGADASTLAAWAAARTSRAQVAASRLDATARPASIV ARGAGSLQLLSGGRALLLLGSESAAANLDALEEAVAVVRSLLDTSRPRVSSAGTRHRLADAEPGPGLELAVPLWLHGSDS TAAALAGRLADGWVVDLDEVGVEGLAALSAVLDRAAVDAGRDVREVRRSVALAPGDLPDADALTALVVDHGVSSVLLRVG TEDEPLLRTFIDTVAPAVRDGAERALPPGALSSRQVRRADVRARRRPDISYDDVPDELAETAVEPGDAAFAKVRSTYLRG GNPGLVLRPRTAAAVASAVGFARVHRHLPLGIRSGGHGISGRSTNDGGLVIDVGALDDVTVLDEAARLVRIGPGARWRDV ATALQPHGWALSSGDYGGVGVGGLATAGGIGFLSRKHGLTIDHLRAVEMVLADGSLVRASATENAELFWAVRGAGANFGI AVAFEFVVDEVAEVGWAQLAFQAPDPAAYLEGFARVVAETPRETTPFLILGQGVAQVMAMVDSADPEVIVGQLQPFAEIA PLVQQQVVIAPYAAVMNMFPETPHNGYGEPVSRSAFTREITPAFASASADLIRSGASHWYQIRTVGGAVADVAPDATAYA HRDANFALAVMGGNAQRLDRWFEPVRRHSDGLYLSFESDRHPDRIADAFPPATLDRLRRLKAEVDPHNLFQDNFNIAPTH DTRTAS >Mature_725_residues TNYGHRIGFGVEVTGAGEAPEDAVALAVLVEDLGYDLVTFPDRGGADASTLAAWAAARTSRAQVAASRLDATARPASIVA RGAGSLQLLSGGRALLLLGSESAAANLDALEEAVAVVRSLLDTSRPRVSSAGTRHRLADAEPGPGLELAVPLWLHGSDST AAALAGRLADGWVVDLDEVGVEGLAALSAVLDRAAVDAGRDVREVRRSVALAPGDLPDADALTALVVDHGVSSVLLRVGT EDEPLLRTFIDTVAPAVRDGAERALPPGALSSRQVRRADVRARRRPDISYDDVPDELAETAVEPGDAAFAKVRSTYLRGG NPGLVLRPRTAAAVASAVGFARVHRHLPLGIRSGGHGISGRSTNDGGLVIDVGALDDVTVLDEAARLVRIGPGARWRDVA TALQPHGWALSSGDYGGVGVGGLATAGGIGFLSRKHGLTIDHLRAVEMVLADGSLVRASATENAELFWAVRGAGANFGIA VAFEFVVDEVAEVGWAQLAFQAPDPAAYLEGFARVVAETPRETTPFLILGQGVAQVMAMVDSADPEVIVGQLQPFAEIAP LVQQQVVIAPYAAVMNMFPETPHNGYGEPVSRSAFTREITPAFASASADLIRSGASHWYQIRTVGGAVADVAPDATAYAH RDANFALAVMGGNAQRLDRWFEPVRRHSDGLYLSFESDRHPDRIADAFPPATLDRLRRLKAEVDPHNLFQDNFNIAPTHD TRTAS
Specific function: Unknown
COG id: COG0277
COG function: function code C; FAD/FMN-containing dehydrogenases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 FAD-binding PCMH-type domain [H]
Homologues:
Organism=Homo sapiens, GI13375618, Length=178, Percent_Identity=31.4606741573034, Blast_Score=67, Evalue=4e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012951 - InterPro: IPR016166 - InterPro: IPR016167 - InterPro: IPR016168 - InterPro: IPR006094 - InterPro: IPR006093 [H]
Pfam domain/function: PF08031 BBE; PF01565 FAD_binding_4 [H]
EC number: =1.5.3.6 [H]
Molecular weight: Translated: 76152; Mature: 76021
Theoretical pI: Translated: 4.98; Mature: 4.98
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 0.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTNYGHRIGFGVEVTGAGEAPEDAVALAVLVEDLGYDLVTFPDRGGADASTLAAWAAART CCCCCCEEECCEEEECCCCCCHHHHHHHHHHHHHCCCEEECCCCCCCCHHHHHHHHHHHH SRAQVAASRLDATARPASIVARGAGSLQLLSGGRALLLLGSESAAANLDALEEAVAVVRS HHHHHHHHHHCCCCCCHHHHHCCCCCEEEECCCCEEEEECCCCCCCCHHHHHHHHHHHHH LLDTSRPRVSSAGTRHRLADAEPGPGLELAVPLWLHGSDSTAAALAGRLADGWVVDLDEV HHHCCCCCCCCCCCHHCCCCCCCCCCCEEEEEEEEECCCCHHHHHHHHCCCCCEEEHHHH GVEGLAALSAVLDRAAVDAGRDVREVRRSVALAPGDLPDADALTALVVDHGVSSVLLRVG CHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCHHHHHHCCC TEDEPLLRTFIDTVAPAVRDGAERALPPGALSSRQVRRADVRARRRPDISYDDVPDELAE CCCCHHHHHHHHHHHHHHHCCHHHCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHH TAVEPGDAAFAKVRSTYLRGGNPGLVLRPRTAAAVASAVGFARVHRHLPLGIRSGGHGIS HHCCCCHHHHHHHHHHHHCCCCCCEEECCCHHHHHHHHHHHHHHHHHCCCEECCCCCCCC GRSTNDGGLVIDVGALDDVTVLDEAARLVRIGPGARWRDVATALQPHGWALSSGDYGGVG CCCCCCCCEEEEECCCCCHHHHHHHHHEEEECCCCCHHHHHHHHCCCCEEECCCCCCCCC VGGLATAGGIGFLSRKHGLTIDHLRAVEMVLADGSLVRASATENAELFWAVRGAGANFGI CCHHHHHCCHHHHHHCCCCCHHHHHHHHHHHCCCCEEEECCCCCCEEEEEEECCCCCCCH AVAFEFVVDEVAEVGWAQLAFQAPDPAAYLEGFARVVAETPRETTPFLILGQGVAQVMAM HHHHHHHHHHHHHCCHHHEEEECCCHHHHHHHHHHHHHCCCCCCCCEEEECHHHHHHHHH VDSADPEVIVGQLQPFAEIAPLVQQQVVIAPYAAVMNMFPETPHNGYGEPVSRSAFTREI HHCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHC TPAFASASADLIRSGASHWYQIRTVGGAVADVAPDATAYAHRDANFALAVMGGNAQRLDR CHHHHHHHHHHHHCCCCCEEEEEECCCHHHHCCCCCHHHEECCCCEEEEEECCCHHHHHH WFEPVRRHSDGLYLSFESDRHPDRIADAFPPATLDRLRRLKAEVDPHNLFQDNFNIAPTH HHHHHHHCCCCEEEEECCCCCCHHHHHCCCCHHHHHHHHHHHCCCHHHHHHCCCCCCCCC DTRTAS CCCCCC >Mature Secondary Structure TNYGHRIGFGVEVTGAGEAPEDAVALAVLVEDLGYDLVTFPDRGGADASTLAAWAAART CCCCCEEECCEEEECCCCCCHHHHHHHHHHHHHCCCEEECCCCCCCCHHHHHHHHHHHH SRAQVAASRLDATARPASIVARGAGSLQLLSGGRALLLLGSESAAANLDALEEAVAVVRS HHHHHHHHHHCCCCCCHHHHHCCCCCEEEECCCCEEEEECCCCCCCCHHHHHHHHHHHHH LLDTSRPRVSSAGTRHRLADAEPGPGLELAVPLWLHGSDSTAAALAGRLADGWVVDLDEV HHHCCCCCCCCCCCHHCCCCCCCCCCCEEEEEEEEECCCCHHHHHHHHCCCCCEEEHHHH GVEGLAALSAVLDRAAVDAGRDVREVRRSVALAPGDLPDADALTALVVDHGVSSVLLRVG CHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCHHHHHHCCC TEDEPLLRTFIDTVAPAVRDGAERALPPGALSSRQVRRADVRARRRPDISYDDVPDELAE CCCCHHHHHHHHHHHHHHHCCHHHCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHH TAVEPGDAAFAKVRSTYLRGGNPGLVLRPRTAAAVASAVGFARVHRHLPLGIRSGGHGIS HHCCCCHHHHHHHHHHHHCCCCCCEEECCCHHHHHHHHHHHHHHHHHCCCEECCCCCCCC GRSTNDGGLVIDVGALDDVTVLDEAARLVRIGPGARWRDVATALQPHGWALSSGDYGGVG CCCCCCCCEEEEECCCCCHHHHHHHHHEEEECCCCCHHHHHHHHCCCCEEECCCCCCCCC VGGLATAGGIGFLSRKHGLTIDHLRAVEMVLADGSLVRASATENAELFWAVRGAGANFGI CCHHHHHCCHHHHHHCCCCCHHHHHHHHHHHCCCCEEEECCCCCCEEEEEEECCCCCCCH AVAFEFVVDEVAEVGWAQLAFQAPDPAAYLEGFARVVAETPRETTPFLILGQGVAQVMAM HHHHHHHHHHHHHCCHHHEEEECCCHHHHHHHHHHHHHCCCCCCCCEEEECHHHHHHHHH VDSADPEVIVGQLQPFAEIAPLVQQQVVIAPYAAVMNMFPETPHNGYGEPVSRSAFTREI HHCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHC TPAFASASADLIRSGASHWYQIRTVGGAVADVAPDATAYAHRDANFALAVMGGNAQRLDR CHHHHHHHHHHHHCCCCCEEEEEECCCHHHHCCCCCHHHEECCCCEEEEEECCCHHHHHH WFEPVRRHSDGLYLSFESDRHPDRIADAFPPATLDRLRRLKAEVDPHNLFQDNFNIAPTH HHHHHHHCCCCEEEEECCCCCCHHHHHCCCCHHHHHHHHHHHCCCHHHHHHCCCCCCCCC DTRTAS CCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 3622516; 2680607; 2115879 [H]