| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is 119717482
Identifier: 119717482
GI number: 119717482
Start: 3458842
End: 3459522
Strand: Reverse
Name: 119717482
Synonym: Noca_3258
Alternate gene names: NA
Gene position: 3459522-3458842 (Counterclockwise)
Preceding gene: 119717483
Following gene: 119717481
Centisome position: 69.39
GC content: 73.27
Gene sequence:
>681_bases TTGGCTCGAGCCATGACTCTCACGCTCGCCGACCTGCACCCGGTGCTCGGGCTGCACATCACCGCCGGTCCGCTCGAGCT GCGCGGGATCACCGACGAGGACCTGCTCGGGCTGTGTGAGCTGGCGCAGCGCGGTGTCCACCCACCCGAGCAGATGCCCT TCTACGTGCCGTGGACCGACGCCCCGCCCGGTGTGCTCGCGCGGAGCACGGCGAGCTACCACTGGCGCAACCGGGCCGAC TACTCCGTCGCGTCCTGGGCGCTCGAGCTCGGGGTGCGGTACGACGGCGTCCTGGTCGGCTGCCAGGGCTTCCGCACCCG CGACTTCCTCGTCACCCGCAGCGGCGAGACCGGGTCCTGGCTGGGCCGCGCGCACCAGGGCCGGGGGATCGGCACGCTGA TGCGCCAGGCGGTCTGCACGTTCGCCTTCGACCACCTGGGGGCGACCGAGGTGACCTCGGGGGCCTTCCTCGACAACCCG GCCTCGCTGGCGGTCTCGCGCAAGCTCGGCTACCGCGACAACGGCCGCCGGCGCCTGGAGCGGCGACCCGGTGAGCTCGC GGTCAACCAGCAGCTGGTGCTCTCACCCGACGACCTGGTCCGTGGCGCCCCCCTCGAGGTCGAGGGGCTGCCCGGGTTCC GACGCCTGGTCGGGCTGGAGGGGGCCTACCCCCTACCCTGA
Upstream 100 bases:
>100_bases ACGCGAGCACGTACGGGCGCCGTCCCCACGGGGGCGGCGCCCGTTCCGCGTCTCCGGGGCCGGGTCTCGTCCCGCGGTTG CGTCCGGCGAGCGGGGTCGG
Downstream 100 bases:
>100_bases CCGCGTGGAGACCATCGAGGTCCTGGTGGGACGGATCGGCAAGCCGCACGGCATCCGGGGGGAGCTCACCCTCGACGTGC GCACGGACGAGCCCGAACGG
Product: GCN5-like N-acetyltransferase
Products: NA
Alternate protein names: Acetyltransferase Ribosomal Protein N-Acetylase; Acetyltransferase; Goadsporin Biosynthetic Protein; GCN5-Related Protein N-Acetyltransferase; Ribosomal Protein N-Acetylase
Number of amino acids: Translated: 226; Mature: 225
Protein sequence:
>226_residues MARAMTLTLADLHPVLGLHITAGPLELRGITDEDLLGLCELAQRGVHPPEQMPFYVPWTDAPPGVLARSTASYHWRNRAD YSVASWALELGVRYDGVLVGCQGFRTRDFLVTRSGETGSWLGRAHQGRGIGTLMRQAVCTFAFDHLGATEVTSGAFLDNP ASLAVSRKLGYRDNGRRRLERRPGELAVNQQLVLSPDDLVRGAPLEVEGLPGFRRLVGLEGAYPLP
Sequences:
>Translated_226_residues MARAMTLTLADLHPVLGLHITAGPLELRGITDEDLLGLCELAQRGVHPPEQMPFYVPWTDAPPGVLARSTASYHWRNRAD YSVASWALELGVRYDGVLVGCQGFRTRDFLVTRSGETGSWLGRAHQGRGIGTLMRQAVCTFAFDHLGATEVTSGAFLDNP ASLAVSRKLGYRDNGRRRLERRPGELAVNQQLVLSPDDLVRGAPLEVEGLPGFRRLVGLEGAYPLP >Mature_225_residues ARAMTLTLADLHPVLGLHITAGPLELRGITDEDLLGLCELAQRGVHPPEQMPFYVPWTDAPPGVLARSTASYHWRNRADY SVASWALELGVRYDGVLVGCQGFRTRDFLVTRSGETGSWLGRAHQGRGIGTLMRQAVCTFAFDHLGATEVTSGAFLDNPA SLAVSRKLGYRDNGRRRLERRPGELAVNQQLVLSPDDLVRGAPLEVEGLPGFRRLVGLEGAYPLP
Specific function: Unknown
COG id: COG1670
COG function: function code J; Acetyltransferases, including N-acetylases of ribosomal proteins
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24698; Mature: 24566
Theoretical pI: Translated: 7.60; Mature: 7.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARAMTLTLADLHPVLGLHITAGPLELRGITDEDLLGLCELAQRGVHPPEQMPFYVPWTD CCCEEEEEHHHHCHHHEEEEECCCEEECCCCCHHHHHHHHHHHCCCCCHHHCCEEEECCC APPGVLARSTASYHWRNRADYSVASWALELGVRYDGVLVGCQGFRTRDFLVTRSGETGSW CCCCCEECCCCCCCCCCCCCCHHHHHHHHHCCEECCEEEECCCCCCEEEEEEECCCCCHH LGRAHQGRGIGTLMRQAVCTFAFDHLGATEVTSGAFLDNPASLAVSRKLGYRDNGRRRLE HHHCCCCCCHHHHHHHHHHHHHHHHCCCHHCCCCCCCCCCHHHEEEHHCCCCCCCHHHHH RRPGELAVNQQLVLSPDDLVRGAPLEVEGLPGFRRLVGLEGAYPLP CCCCCEEECCEEEECHHHHHCCCCEEECCCCHHHHHHCCCCCCCCC >Mature Secondary Structure ARAMTLTLADLHPVLGLHITAGPLELRGITDEDLLGLCELAQRGVHPPEQMPFYVPWTD CCEEEEEHHHHCHHHEEEEECCCEEECCCCCHHHHHHHHHHHCCCCCHHHCCEEEECCC APPGVLARSTASYHWRNRADYSVASWALELGVRYDGVLVGCQGFRTRDFLVTRSGETGSW CCCCCEECCCCCCCCCCCCCCHHHHHHHHHCCEECCEEEECCCCCCEEEEEEECCCCCHH LGRAHQGRGIGTLMRQAVCTFAFDHLGATEVTSGAFLDNPASLAVSRKLGYRDNGRRRLE HHHCCCCCCHHHHHHHHHHHHHHHHCCCHHCCCCCCCCCCHHHEEEHHCCCCCCCHHHHH RRPGELAVNQQLVLSPDDLVRGAPLEVEGLPGFRRLVGLEGAYPLP CCCCCEEECCEEEECHHHHHCCCCEEECCCCHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA