| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
Click here to switch to the map view.
The map label for this gene is tesB [H]
Identifier: 119717075
GI number: 119717075
Start: 3021075
End: 3021941
Strand: Reverse
Name: tesB [H]
Synonym: Noca_2851
Alternate gene names: 119717075
Gene position: 3021941-3021075 (Counterclockwise)
Preceding gene: 119717076
Following gene: 119717074
Centisome position: 60.61
GC content: 73.59
Gene sequence:
>867_bases GTGCCGAGGAACGCCGACGAGCTCGTCGCGCTGCTCGACCTCGAGCGCATCGACGACAACCTCTTCCGGGGGCAGCAGAT GCCCTCGTCGCTGCCGCGCGTGTTCGGTGGCCAGGCCGCGGCCCAGTCGCTCGTCGCGGCGACCCGCACCGTCGACCCGG CGTACGTCGTGCACTCGCTGCACTCCTACTTCCTCCAGCCCGGAGACACCCAGGCGCCGACGATCTACGACGTCGAGAAC CTCCGCGACGGCCGCTCGTTCGCGACCCGGCGGGTGCTCGCACGCCAGCACGGGCGCCCGATCTACGCGCTGACCGCGAA CTTCCACCAGCCCGAGCCCGGGTTCGAGCACCAGGACCGGATGCCCGCTGTGGTCGCGCCGGAGGAGGCGATCGACGCGC GGGCGGCGGCCAAGGAGCTCGACCCCGGCCGCGACACCTCGCACGACTCCGAGTGGGACGTGGTCGACTTCCGCTACGTC GGCTCCGACGGCGACGGGCTGATCGAGCCCGACCCGCGGCACCCGGCGCGGCAGCGGTTCTGGCTGCGGGTCTCCTCGCC GCTGCCGGACGACCCGGTCCAGCACGTCGCGGCGTTCACCTACCTCTCCGACATGACCTTGATGGGCGCGGCGCTCGCGC CGCACGGCGTCCGGGTCGGCGGGCCCGAGACGCTCGTGGCGTCCCTCGACCACGCGGTGTGGTTCCACCGGCCGTTCCGC GCCGACGAGTGGTGGCTCTACGACCAGGTCTCGCCGTCCGCGTCGGGCGGCCGCGGGCTGGTGCTGGCCCGGGTGTTCAC CCAGGACGGCACCCTGGTCGCGAGCGTGGCCCAGGAGGCGCTGATCCGCCGCAGGACGCGATCGTGA
Upstream 100 bases:
>100_bases GACCAGCGGCTGCCCACGGGCGAGGAGATCGGCAAGGAGTTCGAGCGGTTCCTCGCCGGCCTCGACCGCCCGGGCGACGA CGAGCCCCAGGGCTGACTGG
Downstream 100 bases:
>100_bases GCGGGGGAGCGTCGGGCCCGACCGCGGAGCTGGTCGGGCTGCTCGACCTGGAGCGGATCGACGCCGACCTGTTCCGCGGC GGGCAGCCGGACTCGGTCCG
Product: palmitoyl-CoA hydrolase
Products: Hydrolyzed acyl-CoA thioesters [C]
Alternate protein names: Acyl-CoA thioesterase II; TEII [H]
Number of amino acids: Translated: 288; Mature: 287
Protein sequence:
>288_residues MPRNADELVALLDLERIDDNLFRGQQMPSSLPRVFGGQAAAQSLVAATRTVDPAYVVHSLHSYFLQPGDTQAPTIYDVEN LRDGRSFATRRVLARQHGRPIYALTANFHQPEPGFEHQDRMPAVVAPEEAIDARAAAKELDPGRDTSHDSEWDVVDFRYV GSDGDGLIEPDPRHPARQRFWLRVSSPLPDDPVQHVAAFTYLSDMTLMGAALAPHGVRVGGPETLVASLDHAVWFHRPFR ADEWWLYDQVSPSASGGRGLVLARVFTQDGTLVASVAQEALIRRRTRS
Sequences:
>Translated_288_residues MPRNADELVALLDLERIDDNLFRGQQMPSSLPRVFGGQAAAQSLVAATRTVDPAYVVHSLHSYFLQPGDTQAPTIYDVEN LRDGRSFATRRVLARQHGRPIYALTANFHQPEPGFEHQDRMPAVVAPEEAIDARAAAKELDPGRDTSHDSEWDVVDFRYV GSDGDGLIEPDPRHPARQRFWLRVSSPLPDDPVQHVAAFTYLSDMTLMGAALAPHGVRVGGPETLVASLDHAVWFHRPFR ADEWWLYDQVSPSASGGRGLVLARVFTQDGTLVASVAQEALIRRRTRS >Mature_287_residues PRNADELVALLDLERIDDNLFRGQQMPSSLPRVFGGQAAAQSLVAATRTVDPAYVVHSLHSYFLQPGDTQAPTIYDVENL RDGRSFATRRVLARQHGRPIYALTANFHQPEPGFEHQDRMPAVVAPEEAIDARAAAKELDPGRDTSHDSEWDVVDFRYVG SDGDGLIEPDPRHPARQRFWLRVSSPLPDDPVQHVAAFTYLSDMTLMGAALAPHGVRVGGPETLVASLDHAVWFHRPFRA DEWWLYDQVSPSASGGRGLVLARVFTQDGTLVASVAQEALIRRRTRS
Specific function: Can hydrolyze a broad range of acyl-CoA thioesters. Its physiological function is not known [H]
COG id: COG1946
COG function: function code I; Acyl-CoA thioesterase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the C/M/P thioester hydrolase family [H]
Homologues:
Organism=Homo sapiens, GI34577075, Length=288, Percent_Identity=38.5416666666667, Blast_Score=191, Evalue=7e-49, Organism=Escherichia coli, GI1786657, Length=278, Percent_Identity=42.8057553956835, Blast_Score=218, Evalue=5e-58, Organism=Caenorhabditis elegans, GI71988741, Length=289, Percent_Identity=35.2941176470588, Blast_Score=185, Evalue=2e-47, Organism=Caenorhabditis elegans, GI17558508, Length=322, Percent_Identity=36.9565217391304, Blast_Score=184, Evalue=5e-47, Organism=Caenorhabditis elegans, GI17531889, Length=273, Percent_Identity=36.2637362637363, Blast_Score=152, Evalue=2e-37, Organism=Caenorhabditis elegans, GI115532456, Length=273, Percent_Identity=36.2637362637363, Blast_Score=152, Evalue=2e-37, Organism=Caenorhabditis elegans, GI17531885, Length=273, Percent_Identity=36.2637362637363, Blast_Score=151, Evalue=3e-37, Organism=Caenorhabditis elegans, GI71982224, Length=304, Percent_Identity=30.9210526315789, Blast_Score=125, Evalue=2e-29, Organism=Caenorhabditis elegans, GI212645202, Length=294, Percent_Identity=29.2517006802721, Blast_Score=114, Evalue=5e-26,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003703 [H]
Pfam domain/function: PF02551 Acyl_CoA_thio [H]
EC number: 3.1.2.- [C]
Molecular weight: Translated: 31948; Mature: 31817
Theoretical pI: Translated: 5.95; Mature: 5.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPRNADELVALLDLERIDDNLFRGQQMPSSLPRVFGGQAAAQSLVAATRTVDPAYVVHSL CCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHH HSYFLQPGDTQAPTIYDVENLRDGRSFATRRVLARQHGRPIYALTANFHQPEPGFEHQDR HHHHCCCCCCCCCEEEEHHHCCCCHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCC MPAVVAPEEAIDARAAAKELDPGRDTSHDSEWDVVDFRYVGSDGDGLIEPDPRHPARQRF CCEEECCHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCHHHHEE WLRVSSPLPDDPVQHVAAFTYLSDMTLMGAALAPHGVRVGGPETLVASLDHAVWFHRPFR EEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEECCHHHHHHHHHHHHHHCCCCC ADEWWLYDQVSPSASGGRGLVLARVFTQDGTLVASVAQEALIRRRTRS CCCCEEEECCCCCCCCCCEEEEEEEECCCCHHHHHHHHHHHHHHHCCC >Mature Secondary Structure PRNADELVALLDLERIDDNLFRGQQMPSSLPRVFGGQAAAQSLVAATRTVDPAYVVHSL CCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHH HSYFLQPGDTQAPTIYDVENLRDGRSFATRRVLARQHGRPIYALTANFHQPEPGFEHQDR HHHHCCCCCCCCCEEEEHHHCCCCHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCC MPAVVAPEEAIDARAAAKELDPGRDTSHDSEWDVVDFRYVGSDGDGLIEPDPRHPARQRF CCEEECCHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCHHHHEE WLRVSSPLPDDPVQHVAAFTYLSDMTLMGAALAPHGVRVGGPETLVASLDHAVWFHRPFR EEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEECCHHHHHHHHHHHHHHCCCCC ADEWWLYDQVSPSASGGRGLVLARVFTQDGTLVASVAQEALIRRRTRS CCCCEEEECCCCCCCCCCEEEEEEEECCCCHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: acyl-CoA thioesters [C]
Specific reaction: Hydrolyzes a broad range of acyl-CoA thioesters [C]
General reaction: Hydrolase; Acting on ester bonds; Thiolester hydrolases [C]
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]