| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is 119716977
Identifier: 119716977
GI number: 119716977
Start: 2923745
End: 2924233
Strand: Reverse
Name: 119716977
Synonym: Noca_2752
Alternate gene names: NA
Gene position: 2924233-2923745 (Counterclockwise)
Preceding gene: 119716978
Following gene: 119716972
Centisome position: 58.65
GC content: 62.78
Gene sequence:
>489_bases TTGGAGAAGTTTCGCACCGAGTTGCAGAAGATTGGCCTCCTCGGCGGCTACGCGAACCCCGACGATCTCGCTTACCAGGT GCGTCAGGCGATCGAGCACGACCTACGGCAGCTTTCCCTCGGGGCTGTCAAGGGCCCGAAGGCCAAGGCTGGGGCCGTCA TCCGGTCACGGTTCCACTACGAACGGAATCCCAACGGGTTCACCAACCAGGGAAAGCAGAAATGGAGCACGATCAGCCGC CTCGTGGTCGCCAACGATGGTGACGCGACGGCTGAGGGGCTTACTGTCTCGGTCTCGAAGCCGGATGGGGCGGACGAGGG CGCTGGCTTCAGGTGGGGAGCATCCGCTCCGGACACTCCATTCGACTTACTCCCCGGCGCCAACCGCGAGTGGCCCTTCC TGCCGGTGGGGCTCGACTCCGTAGTTATTCACAGTGAATGGGTTGAGGCTGGCAAGGCGCACTCCGAGGACCAGATGATC ACGGTCTAA
Upstream 100 bases:
>100_bases AGAGGAGATCAAGCGCGCGCACGGGGCCGGCAAACCGGTTCATGTCTGGTTCTCGAACGAGCCTATTCCGCGGGACGCAG ATCTGAAGCAGCTCGCTGCC
Downstream 100 bases:
>100_bases CAGGCTCGCTATTGGGTGCGGTCTCATCTTGGCGAGGACTATCCCGCGCCCGCGGGCCTATTGGATTGGCCTCACAACAC GGGTTCCTGAAAGGGTGCGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 162; Mature: 162
Protein sequence:
>162_residues MEKFRTELQKIGLLGGYANPDDLAYQVRQAIEHDLRQLSLGAVKGPKAKAGAVIRSRFHYERNPNGFTNQGKQKWSTISR LVVANDGDATAEGLTVSVSKPDGADEGAGFRWGASAPDTPFDLLPGANREWPFLPVGLDSVVIHSEWVEAGKAHSEDQMI TV
Sequences:
>Translated_162_residues MEKFRTELQKIGLLGGYANPDDLAYQVRQAIEHDLRQLSLGAVKGPKAKAGAVIRSRFHYERNPNGFTNQGKQKWSTISR LVVANDGDATAEGLTVSVSKPDGADEGAGFRWGASAPDTPFDLLPGANREWPFLPVGLDSVVIHSEWVEAGKAHSEDQMI TV >Mature_162_residues MEKFRTELQKIGLLGGYANPDDLAYQVRQAIEHDLRQLSLGAVKGPKAKAGAVIRSRFHYERNPNGFTNQGKQKWSTISR LVVANDGDATAEGLTVSVSKPDGADEGAGFRWGASAPDTPFDLLPGANREWPFLPVGLDSVVIHSEWVEAGKAHSEDQMI TV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17615; Mature: 17615
Theoretical pI: Translated: 6.11; Mature: 6.11
Prosite motif: PS00024 HEMOPEXIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEKFRTELQKIGLLGGYANPDDLAYQVRQAIEHDLRQLSLGAVKGPKAKAGAVIRSRFHY CCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCC ERNPNGFTNQGKQKWSTISRLVVANDGDATAEGLTVSVSKPDGADEGAGFRWGASAPDTP CCCCCCCCCCHHHHHHHHHEEEEECCCCCCCCCEEEEEECCCCCCCCCCEEECCCCCCCC FDLLPGANREWPFLPVGLDSVVIHSEWVEAGKAHSEDQMITV HHCCCCCCCCCCEEEECCCCEEHHHHHHHHCCCCCCCCEEEC >Mature Secondary Structure MEKFRTELQKIGLLGGYANPDDLAYQVRQAIEHDLRQLSLGAVKGPKAKAGAVIRSRFHY CCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCC ERNPNGFTNQGKQKWSTISRLVVANDGDATAEGLTVSVSKPDGADEGAGFRWGASAPDTP CCCCCCCCCCHHHHHHHHHEEEEECCCCCCCCCEEEEEECCCCCCCCCCEEECCCCCCCC FDLLPGANREWPFLPVGLDSVVIHSEWVEAGKAHSEDQMITV HHCCCCCCCCCCEEEECCCCEEHHHHHHHHCCCCCCCCEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA