| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is cyp125 [H]
Identifier: 119716964
GI number: 119716964
Start: 2911727
End: 2912968
Strand: Reverse
Name: cyp125 [H]
Synonym: Noca_2739
Alternate gene names: 119716964
Gene position: 2912968-2911727 (Counterclockwise)
Preceding gene: 119716966
Following gene: 119716962
Centisome position: 58.42
GC content: 68.44
Gene sequence:
>1242_bases GTGACCGCATCCGACGTCCTCCCCGAGGGTTTCGACTTCACCGACCCGGACCTGATCCAGCGCGCGATCCCGCACGACGA GTTCCGCGCCGCGCGCCGGCACGCGCCGATCACCTGGATCGAACAGCCGTGGGAGCCGCGCAGCGGCTTCGCCGAGGAGG CCGGCACCGGCTACTACGCGGTCACCCGCCACGAGGACGTCGCCGCGATCTCGAAGGACAGCAAGAACTGGTCGACGTAC GAGAACGGCGCGATCATCCGGTTCCCCGGGGAGATGGCGCGCGAGCAGGTCGAGCTCCAGCGGGTGATCCTGATCAACCA GGACCCGCCCGAGCACACCGCGACCCGCGGGATCGTCTCGCGCGGCTTCACGCCGCGCTCGATCGCCGAGCTCGAGGACA CCATGGTCCAGCGGGCCACGACGATCATGAAGGAGGCCGTCGCGCGCGGCACCGGCAACTTCGTCGAGGAGGTCGCTGCG GAGCTCCCGCTGCAGGCGATCGCCGACCTGATCGGCGTGCCGCAGGAGGACCGGCACAAGCTCTTCGAGTGGTCCAACCA GATGCTCGCAGGCGAGGACCCGGACTACGCCGGCGAGAACGAGGTCGCCGCGGCCGAGATCCTCGGCTACTCGATGATGC TGGCCGCGGACCGGCAGGCCAACCCCCGCGACGACCTGATCACCAAGCTGATCAACGCCCACAAGGGTGAGCGCGGCCTG ACCGACGACGAGTTCGGCTACTTCGTGATCCTGCTGGCGGTCGCCGGCAACGAGACCACCCGCAACGCGATCACCCACGG CATGAACGCCTTCCTCGACAACCCCGAGCAGTGGGAGATCTGGAAGAACGACCGGCCGGCCACGATGGTCGACGAGATCG TCCGCTGGGCCACCCCGGTCAGCGTCTTCCAGCGCACCGCCCTCAGCGACGTCGAGCTCGGCGGGGTGCGGTTCAAGAAG GGCCAGAGGGCCGCGCTGTTCTACGCCAGCGCGAACTTCGACGAGGACGTCTTCGAGGACCCCTACACCTTCAACATCCT GCGCGACCCGAACCCGCAGCTGGGCTTTGGCGGGCACGGTGCGCACTACTGCCTGGGCCACAACCTGGCCCGCCAGGAGA TGCGGGCGATCTTCAACGCGATCGCCGACTACGCGCCCGACATCACCAAGCTCGCCGAGCCGAAGCGGCTGCGGCACTCC TGGGTCAACGGCATCAAGGACCTCCAGGTCCGTTACGCCTGA
Upstream 100 bases:
>100_bases TAGAACACGTTCTTGTCCTGGACAACCTTCCCCTGCGTACCTTCGGTATGTAGTCTCTGTCACTAGAACGTGTTACAGCC AGCCAGCTGAGGGAGCTCCA
Downstream 100 bases:
>100_bases GCCGGGGCTCGCTCAGGCGCGAGCCGTCAGTACGACGTGGCCGTCCTCGGTGATCGCCACCGTGTGCTCCATGTGCGCGC CCCGGGACCCGTCCTTGCTG
Product: cytochrome P450 CYP125
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 413; Mature: 412
Protein sequence:
>413_residues MTASDVLPEGFDFTDPDLIQRAIPHDEFRAARRHAPITWIEQPWEPRSGFAEEAGTGYYAVTRHEDVAAISKDSKNWSTY ENGAIIRFPGEMAREQVELQRVILINQDPPEHTATRGIVSRGFTPRSIAELEDTMVQRATTIMKEAVARGTGNFVEEVAA ELPLQAIADLIGVPQEDRHKLFEWSNQMLAGEDPDYAGENEVAAAEILGYSMMLAADRQANPRDDLITKLINAHKGERGL TDDEFGYFVILLAVAGNETTRNAITHGMNAFLDNPEQWEIWKNDRPATMVDEIVRWATPVSVFQRTALSDVELGGVRFKK GQRAALFYASANFDEDVFEDPYTFNILRDPNPQLGFGGHGAHYCLGHNLARQEMRAIFNAIADYAPDITKLAEPKRLRHS WVNGIKDLQVRYA
Sequences:
>Translated_413_residues MTASDVLPEGFDFTDPDLIQRAIPHDEFRAARRHAPITWIEQPWEPRSGFAEEAGTGYYAVTRHEDVAAISKDSKNWSTY ENGAIIRFPGEMAREQVELQRVILINQDPPEHTATRGIVSRGFTPRSIAELEDTMVQRATTIMKEAVARGTGNFVEEVAA ELPLQAIADLIGVPQEDRHKLFEWSNQMLAGEDPDYAGENEVAAAEILGYSMMLAADRQANPRDDLITKLINAHKGERGL TDDEFGYFVILLAVAGNETTRNAITHGMNAFLDNPEQWEIWKNDRPATMVDEIVRWATPVSVFQRTALSDVELGGVRFKK GQRAALFYASANFDEDVFEDPYTFNILRDPNPQLGFGGHGAHYCLGHNLARQEMRAIFNAIADYAPDITKLAEPKRLRHS WVNGIKDLQVRYA >Mature_412_residues TASDVLPEGFDFTDPDLIQRAIPHDEFRAARRHAPITWIEQPWEPRSGFAEEAGTGYYAVTRHEDVAAISKDSKNWSTYE NGAIIRFPGEMAREQVELQRVILINQDPPEHTATRGIVSRGFTPRSIAELEDTMVQRATTIMKEAVARGTGNFVEEVAAE LPLQAIADLIGVPQEDRHKLFEWSNQMLAGEDPDYAGENEVAAAEILGYSMMLAADRQANPRDDLITKLINAHKGERGLT DDEFGYFVILLAVAGNETTRNAITHGMNAFLDNPEQWEIWKNDRPATMVDEIVRWATPVSVFQRTALSDVELGGVRFKKG QRAALFYASANFDEDVFEDPYTFNILRDPNPQLGFGGHGAHYCLGHNLARQEMRAIFNAIADYAPDITKLAEPKRLRHSW VNGIKDLQVRYA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the cytochrome P450 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001128 - InterPro: IPR002397 [H]
Pfam domain/function: PF00067 p450 [H]
EC number: NA
Molecular weight: Translated: 46386; Mature: 46255
Theoretical pI: Translated: 4.70; Mature: 4.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTASDVLPEGFDFTDPDLIQRAIPHDEFRAARRHAPITWIEQPWEPRSGFAEEAGTGYYA CCCCCCCCCCCCCCCHHHHHHHCCHHHHHHHHHCCCCEECCCCCCCCCCCHHHCCCCEEE VTRHEDVAAISKDSKNWSTYENGAIIRFPGEMAREQVELQRVILINQDPPEHTATRGIVS EECCCCHHHHCCCCCCCCCCCCCCEEECCHHHHHHHHHHHEEEEECCCCCHHHHHHHHHH RGFTPRSIAELEDTMVQRATTIMKEAVARGTGNFVEEVAAELPLQAIADLIGVPQEDRHK CCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCHHHHHHHHCCCCHHHHH LFEWSNQMLAGEDPDYAGENEVAAAEILGYSMMLAADRQANPRDDLITKLINAHKGERGL HHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHEECCCCCCCHHHHHHHHHHHCCCCCCC TDDEFGYFVILLAVAGNETTRNAITHGMNAFLDNPEQWEIWKNDRPATMVDEIVRWATPV CCCCCCEEEEEEEECCCCHHHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHCCHH SVFQRTALSDVELGGVRFKKGQRAALFYASANFDEDVFEDPYTFNILRDPNPQLGFGGHG HHHHHHHHCCCCCCCEEECCCCEEEEEEEECCCCHHHHCCCCEEEEEECCCCCCCCCCCC AHYCLGHNLARQEMRAIFNAIADYAPDITKLAEPKRLRHSWVNGIKDLQVRYA CHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCHHHHHHHHHCCHHHHEEECC >Mature Secondary Structure TASDVLPEGFDFTDPDLIQRAIPHDEFRAARRHAPITWIEQPWEPRSGFAEEAGTGYYA CCCCCCCCCCCCCCHHHHHHHCCHHHHHHHHHCCCCEECCCCCCCCCCCHHHCCCCEEE VTRHEDVAAISKDSKNWSTYENGAIIRFPGEMAREQVELQRVILINQDPPEHTATRGIVS EECCCCHHHHCCCCCCCCCCCCCCEEECCHHHHHHHHHHHEEEEECCCCCHHHHHHHHHH RGFTPRSIAELEDTMVQRATTIMKEAVARGTGNFVEEVAAELPLQAIADLIGVPQEDRHK CCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCHHHHHHHHCCCCHHHHH LFEWSNQMLAGEDPDYAGENEVAAAEILGYSMMLAADRQANPRDDLITKLINAHKGERGL HHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHEECCCCCCCHHHHHHHHHHHCCCCCCC TDDEFGYFVILLAVAGNETTRNAITHGMNAFLDNPEQWEIWKNDRPATMVDEIVRWATPV CCCCCCEEEEEEEECCCCHHHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHCCHH SVFQRTALSDVELGGVRFKKGQRAALFYASANFDEDVFEDPYTFNILRDPNPQLGFGGHG HHHHHHHHCCCCCCCEEECCCCEEEEEEEECCCCHHHHCCCCEEEEEECCCCCCCCCCCC AHYCLGHNLARQEMRAIFNAIADYAPDITKLAEPKRLRHSWVNGIKDLQVRYA CHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCHHHHHHHHHCCHHHHEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 12788972 [H]