| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is 119716592
Identifier: 119716592
GI number: 119716592
Start: 2520447
End: 2521682
Strand: Direct
Name: 119716592
Synonym: Noca_2365
Alternate gene names: NA
Gene position: 2520447-2521682 (Clockwise)
Preceding gene: 119716591
Following gene: 119716594
Centisome position: 50.55
GC content: 67.39
Gene sequence:
>1236_bases ATGACTTCTGAGCCGTACCGGGCCCGTCGCGTCTTCGTCTGGACCTGGCTGCCCGGCGAGTCGACGCCCGTGGTGGCCGG GGCGGTCGACCGCGTCGGCGCCGATCGTCTGGACTTCACCTACGCCCGGTCCTACCTCGACAACGAGAGGGCGATCAGCC TCTACACGCCCGAGTTGCCGTTGCGTCGCGGAACCCAGGAGCCGATGGACGGCCTGACGGTCGCTGCTTGTCTCAGGGAC GCGACACCGGACTCCTGGGGTGAGCGGGTGATCGGCAACCGCCTCGGCTCGGGCGACACTGAGCTCAGCGTCGAGACCTA CATGTTGGAGTCCGGCTCGAACCGACTTGGTGCCATCGACTTTCAGGAGAGCCCCGAGGACTACAGCCCGCGCGTGGACA CAGCCGGCCTGGACGAGCTGTACGACGCCGCCGAGAAGGTCCTTGCTGGGGAGCCGTTGAACCCGGCCATCGGCGATGCT CTGATGAACGGGACCGCCATCGGTGGCGCGCACCCGAAGGTCCTGATCAGCGACGACTCGGGAGTCGAGCACCTCGCCAA GCTGTCGGTCTCCAGCGACGTGCATCCATGGGTTCGAGCCGAGGCCGTCGCAATCGAGCTCGCACGACTCTGCGGCATCG AGGTGCCCAAGGCGCACGTCATCAAGTCGGTGGGCCGGGAGGTGCTGCTCATCGAGCGGTTCGACCGTCCACCCGGTGGC CGGCGCCGTCACGTCGTCTCGGGTCTGACGATGCTCGGTTTCGACGCGCTCCTGGGTGCGCGCTACGGGTCGTACCCCGA GATGCTCGACGTCCTTCGTGAGTGGGGCCGCGCTCCACAAGACATCGGCCACCGGCTCTTCGAGCGCATCGTCTTCAACA TCGCGGTCGGCAACAACGACGATCATGCACGGAACCACGCAGCGTTCTGGGACGGCACGAGCCTCGAGCTCACCCCGGCG TTCGACCTGACCCCGCAGCCCCGTTCGACCGACACGTCTGCCCAGGCGATGGCCATCGGCCGTGACGGAAGCCGAGCCAG CCGGTTCTCCGTGTGCGTGGCCGCGGCCGCTGACTACGGACTCTCCCGAGCCGAGGCAGGGCAGATCGTCGAGCGCATTG TCGCGACGGTCGAGAACCACTGGTCCGAAGCTGCGGACGCCGCCGGGCTGAGCGAGGCGGATCGGAACCTGCTCTGGAAG CGGTCCATCCTCAACCGTTCGTCCTTCTACGACTGA
Upstream 100 bases:
>100_bases GACCGCGCGGAGCTCGCGCGGCTCCGTCGAGAGGGACGAGACCGGCTGGCACTGCTGCCCACTCGGGTGGACAAGCCTCG GAAGCAGGCGGAGCCTGACG
Downstream 100 bases:
>100_bases GACTTCACGAGTGGCCCGGCCCGGCGGGGCCTGGCCCCTCTGAGTTCATGCAGGCATACGCAGTCAGCAGCGTCCGTTGC TTGCTCCTCGCAGGTTCCCC
Product: HipA domain-containing protein
Products: NA
Alternate protein names: HipA Domain Protein; Xin-Antitoxin System Toxin Component HipA Family; Amidophosphoribosyl Transferase; HipA-Like C-Terminal Domain-Containing; HipA-Like; HipA-Like Protein; HipA Protein; Hipa Domain Protein; HipA-Family Phosphatidylinositol 3/4-Kinase; Hipa Protein; Protein Related Capsule Biosynthesis -Like; Protein Containing HipA-Like C-Terminal Domain; HipA-Like N-Terminal Domain Family; Conserved Protein; Orf_Bo
Number of amino acids: Translated: 411; Mature: 410
Protein sequence:
>411_residues MTSEPYRARRVFVWTWLPGESTPVVAGAVDRVGADRLDFTYARSYLDNERAISLYTPELPLRRGTQEPMDGLTVAACLRD ATPDSWGERVIGNRLGSGDTELSVETYMLESGSNRLGAIDFQESPEDYSPRVDTAGLDELYDAAEKVLAGEPLNPAIGDA LMNGTAIGGAHPKVLISDDSGVEHLAKLSVSSDVHPWVRAEAVAIELARLCGIEVPKAHVIKSVGREVLLIERFDRPPGG RRRHVVSGLTMLGFDALLGARYGSYPEMLDVLREWGRAPQDIGHRLFERIVFNIAVGNNDDHARNHAAFWDGTSLELTPA FDLTPQPRSTDTSAQAMAIGRDGSRASRFSVCVAAAADYGLSRAEAGQIVERIVATVENHWSEAADAAGLSEADRNLLWK RSILNRSSFYD
Sequences:
>Translated_411_residues MTSEPYRARRVFVWTWLPGESTPVVAGAVDRVGADRLDFTYARSYLDNERAISLYTPELPLRRGTQEPMDGLTVAACLRD ATPDSWGERVIGNRLGSGDTELSVETYMLESGSNRLGAIDFQESPEDYSPRVDTAGLDELYDAAEKVLAGEPLNPAIGDA LMNGTAIGGAHPKVLISDDSGVEHLAKLSVSSDVHPWVRAEAVAIELARLCGIEVPKAHVIKSVGREVLLIERFDRPPGG RRRHVVSGLTMLGFDALLGARYGSYPEMLDVLREWGRAPQDIGHRLFERIVFNIAVGNNDDHARNHAAFWDGTSLELTPA FDLTPQPRSTDTSAQAMAIGRDGSRASRFSVCVAAAADYGLSRAEAGQIVERIVATVENHWSEAADAAGLSEADRNLLWK RSILNRSSFYD >Mature_410_residues TSEPYRARRVFVWTWLPGESTPVVAGAVDRVGADRLDFTYARSYLDNERAISLYTPELPLRRGTQEPMDGLTVAACLRDA TPDSWGERVIGNRLGSGDTELSVETYMLESGSNRLGAIDFQESPEDYSPRVDTAGLDELYDAAEKVLAGEPLNPAIGDAL MNGTAIGGAHPKVLISDDSGVEHLAKLSVSSDVHPWVRAEAVAIELARLCGIEVPKAHVIKSVGREVLLIERFDRPPGGR RRHVVSGLTMLGFDALLGARYGSYPEMLDVLREWGRAPQDIGHRLFERIVFNIAVGNNDDHARNHAAFWDGTSLELTPAF DLTPQPRSTDTSAQAMAIGRDGSRASRFSVCVAAAADYGLSRAEAGQIVERIVATVENHWSEAADAAGLSEADRNLLWKR SILNRSSFYD
Specific function: Unknown
COG id: COG3550
COG function: function code R; Uncharacterized protein related to capsule biosynthesis enzymes
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44861; Mature: 44729
Theoretical pI: Translated: 4.81; Mature: 4.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSEPYRARRVFVWTWLPGESTPVVAGAVDRVGADRLDFTYARSYLDNERAISLYTPELP CCCCCCCCEEEEEEEECCCCCCCEEECCHHHCCCCHHHHHHHHHHCCCCCEEEEECCCCC LRRGTQEPMDGLTVAACLRDATPDSWGERVIGNRLGSGDTELSVETYMLESGSNRLGAID CCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCEEEEEEEEECCCCCEEEEC FQESPEDYSPRVDTAGLDELYDAAEKVLAGEPLNPAIGDALMNGTAIGGAHPKVLISDDS CCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHCCCEECCCCCEEEEECCC GVEHLAKLSVSSDVHPWVRAEAVAIELARLCGIEVPKAHVIKSVGREVLLIERFDRPPGG CHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCEEEEEECCCCCCC RRRHVVSGLTMLGFDALLGARYGSYPEMLDVLREWGRAPQDIGHRLFERIVFNIAVGNND CCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHEEEEECCCC DHARNHAAFWDGTSLELTPAFDLTPQPRSTDTSAQAMAIGRDGSRASRFSVCVAAAADYG CCCCCCCEEECCCCEEEEECCCCCCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHCC LSRAEAGQIVERIVATVENHWSEAADAAGLSEADRNLLWKRSILNRSSFYD CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure TSEPYRARRVFVWTWLPGESTPVVAGAVDRVGADRLDFTYARSYLDNERAISLYTPELP CCCCCCCEEEEEEEECCCCCCCEEECCHHHCCCCHHHHHHHHHHCCCCCEEEEECCCCC LRRGTQEPMDGLTVAACLRDATPDSWGERVIGNRLGSGDTELSVETYMLESGSNRLGAID CCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCEEEEEEEEECCCCCEEEEC FQESPEDYSPRVDTAGLDELYDAAEKVLAGEPLNPAIGDALMNGTAIGGAHPKVLISDDS CCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHCCCEECCCCCEEEEECCC GVEHLAKLSVSSDVHPWVRAEAVAIELARLCGIEVPKAHVIKSVGREVLLIERFDRPPGG CHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCEEEEEECCCCCCC RRRHVVSGLTMLGFDALLGARYGSYPEMLDVLREWGRAPQDIGHRLFERIVFNIAVGNND CCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHEEEEECCCC DHARNHAAFWDGTSLELTPAFDLTPQPRSTDTSAQAMAIGRDGSRASRFSVCVAAAADYG CCCCCCCEEECCCCEEEEECCCCCCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHCC LSRAEAGQIVERIVATVENHWSEAADAAGLSEADRNLLWKRSILNRSSFYD CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA