| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is 119716591
Identifier: 119716591
GI number: 119716591
Start: 2520113
End: 2520457
Strand: Direct
Name: 119716591
Synonym: Noca_2364
Alternate gene names: NA
Gene position: 2520113-2520457 (Clockwise)
Preceding gene: 119716589
Following gene: 119716592
Centisome position: 50.55
GC content: 71.59
Gene sequence:
>345_bases ATGGCCAGGATTCGGGTCTCGCCGCGCCGAGGTGCGGCCGACGCAGCGGTCGTGCTCGGCCAGCAGGTGAAGGCTGCGCG CGTCGCACGCAGGTGGACCGCAGTCGAGCTGGCCGAGCGGATCGGGGTCGACCGCCGTACGGTCGCAGCCATCGAAGCGG GGGACCCGGGCGTCTCGCTCGGCAACGCGTTCAATGCCGCCGACATCCTGGGCGTCCCGCTGTTCGGCGCTGAGGACCGC GCGGAGCTCGCGCGGCTCCGTCGAGAGGGACGAGACCGGCTGGCACTGCTGCCCACTCGGGTGGACAAGCCTCGGAAGCA GGCGGAGCCTGACGATGACTTCTGA
Upstream 100 bases:
>100_bases CGCCAGCTGTGTGGGCGAACGACCCGCTGCAAGAATTGCGTCGCGTGGTGTGCATTAGATTGGATCTAATGCTAGGTTAA GTACAAAGTAAGGGGCATCC
Downstream 100 bases:
>100_bases GCCGTACCGGGCCCGTCGCGTCTTCGTCTGGACCTGGCTGCCCGGCGAGTCGACGCCCGTGGTGGCCGGGGCGGTCGACC GCGTCGGCGCCGATCGTCTG
Product: XRE family transcriptional regulator
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 114; Mature: 113
Protein sequence:
>114_residues MARIRVSPRRGAADAAVVLGQQVKAARVARRWTAVELAERIGVDRRTVAAIEAGDPGVSLGNAFNAADILGVPLFGAEDR AELARLRREGRDRLALLPTRVDKPRKQAEPDDDF
Sequences:
>Translated_114_residues MARIRVSPRRGAADAAVVLGQQVKAARVARRWTAVELAERIGVDRRTVAAIEAGDPGVSLGNAFNAADILGVPLFGAEDR AELARLRREGRDRLALLPTRVDKPRKQAEPDDDF >Mature_113_residues ARIRVSPRRGAADAAVVLGQQVKAARVARRWTAVELAERIGVDRRTVAAIEAGDPGVSLGNAFNAADILGVPLFGAEDRA ELARLRREGRDRLALLPTRVDKPRKQAEPDDDF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12381; Mature: 12250
Theoretical pI: Translated: 11.20; Mature: 11.20
Prosite motif: PS50943 HTH_CROC1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 0.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARIRVSPRRGAADAAVVLGQQVKAARVARRWTAVELAERIGVDRRTVAAIEAGDPGVSL CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHEEEEECCCCCCCC GNAFNAADILGVPLFGAEDRAELARLRREGRDRLALLPTRVDKPRKQAEPDDDF CCCCCCHHHHCCCCCCCCCHHHHHHHHHCCCCCEEECCCCCCCCHHHCCCCCCC >Mature Secondary Structure ARIRVSPRRGAADAAVVLGQQVKAARVARRWTAVELAERIGVDRRTVAAIEAGDPGVSL CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHEEEEECCCCCCCC GNAFNAADILGVPLFGAEDRAELARLRREGRDRLALLPTRVDKPRKQAEPDDDF CCCCCCHHHHCCCCCCCCCHHHHHHHHHCCCCCEEECCCCCCCCHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA